RNA–Protein interactions for RNA: ENSMUST00000119954.8

Pcf11-201, Transcript of Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcf11, Length 5,995 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11-201ENSMUST00000119954 Rbbp6P97868 1790 aaKnown RBP13.89□□□□□ -0.19
Pcf11-201ENSMUST00000119954 Trav12d-3A0A075B6A4 115 aa13.89□□□□□ -0.19
Pcf11-201ENSMUST00000119954 Vpreb2P13373 142 aa13.89□□□□□ -0.19
Pcf11-201ENSMUST00000119954 Olfr311Q5NC59 308 aa13.89□□□□□ -0.19
Pcf11-201ENSMUST00000119954 Mrps12O35680 139 aa13.88□□□□□ -0.19
Pcf11-201ENSMUST00000119954 PemtQ61907 199 aa13.88□□□□□ -0.19
Pcf11-201ENSMUST00000119954 Glrp1E9Q9S8 174 aa13.88□□□□□ -0.19
Pcf11-201ENSMUST00000119954 Cox17P56394 63 aa13.87□□□□□ -0.19
Pcf11-201ENSMUST00000119954 Zgrf1Q0VGT4 1863 aa13.87□□□□□ -0.19
Pcf11-201ENSMUST00000119954 Trav4d-3A0A075B625 110 aa13.87□□□□□ -0.19
Pcf11-201ENSMUST00000119954 Ighv1-64A0A075B5X3 117 aa13.86□□□□□ -0.19
Pcf11-201ENSMUST00000119954 Igkv1-122A0A140T8M9 119 aa13.86□□□□□ -0.19
Pcf11-201ENSMUST00000119954 Dopey2Q3UHQ6 2295 aa13.86□□□□□ -0.19
Pcf11-201ENSMUST00000119954 Iglc1A0A0G2JE99 106 aa13.86□□□□□ -0.19
Pcf11-201ENSMUST00000119954 P01843 105 aa13.86□□□□□ -0.19
Pcf11-201ENSMUST00000119954 Zic4Q61467 341 aa13.86□□□□□ -0.19
Pcf11-201ENSMUST00000119954 Ltbp4Q8K4G1 1666 aa13.86□□□□□ -0.19
Pcf11-201ENSMUST00000119954 Ndufa1O35683 70 aa13.85□□□□□ -0.19
Pcf11-201ENSMUST00000119954 Fhl3Q9R059 289 aa13.85□□□□□ -0.19
Pcf11-201ENSMUST00000119954 Trav11A0A0B4J1J9 114 aa13.85□□□□□ -0.19
Pcf11-201ENSMUST00000119954 Egr2P08152 470 aa13.85□□□□□ -0.19
Pcf11-201ENSMUST00000119954 Pou2af1Q64693 256 aa13.85□□□□□ -0.19
Pcf11-201ENSMUST00000119954 Dennd4aE9Q8V6 1869 aa13.85□□□□□ -0.19
Pcf11-201ENSMUST00000119954 BikO70337 150 aa13.84□□□□□ -0.19
Pcf11-201ENSMUST00000119954 Reg3gO09049 174 aa13.84□□□□□ -0.19
Pcf11-201ENSMUST00000119954 Tnfrsf13bQ9ET35 249 aa13.84□□□□□ -0.19
Pcf11-201ENSMUST00000119954 Cox7a1P56392 80 aa13.83□□□□□ -0.19
Pcf11-201ENSMUST00000119954 NpbQ8K4P1 119 aa13.83□□□□□ -0.19
Pcf11-201ENSMUST00000119954 Foxs1Q61574 329 aa13.83□□□□□ -0.2
Pcf11-201ENSMUST00000119954 Foxi2Q3I5G5 311 aa13.83□□□□□ -0.2
Pcf11-201ENSMUST00000119954 Phf3B2RQG2 2025 aaKnown RBP13.83□□□□□ -0.2
Pcf11-201ENSMUST00000119954 Gm10251J3QPM5 127 aa13.82□□□□□ -0.2
Pcf11-201ENSMUST00000119954 Gm2916Q9D9B9 127 aa13.82□□□□□ -0.2
Pcf11-201ENSMUST00000119954 Gm45861A0A1B0GRY3 1923 aa13.82□□□□□ -0.2
Pcf11-201ENSMUST00000119954 Spink4O35679 86 aa13.82□□□□□ -0.2
Pcf11-201ENSMUST00000119954 Spag11Q8K4N2 71 aa13.82□□□□□ -0.2
Pcf11-201ENSMUST00000119954 C920008G01RikA0A0B4J1N1 112 aa13.82□□□□□ -0.2
Pcf11-201ENSMUST00000119954 Trbv14A0A140T8L9 115 aa13.82□□□□□ -0.2
Pcf11-201ENSMUST00000119954 Atp6v0e2Q91XE7 81 aa13.82□□□□□ -0.2
Pcf11-201ENSMUST00000119954 Trav7-6A0A075B640 112 aa13.81□□□□□ -0.2
Pcf11-201ENSMUST00000119954 Wfdc11A2A5H7 82 aa13.81□□□□□ -0.2
Pcf11-201ENSMUST00000119954 Gm26602M0QWA4 95 aa13.81□□□□□ -0.2
Pcf11-201ENSMUST00000119954 P06330 118 aa13.81□□□□□ -0.2
Pcf11-201ENSMUST00000119954 Ighv3-6P18531 116 aa13.81□□□□□ -0.2
Pcf11-201ENSMUST00000119954 Igkv8-26A0A075B5N5 123 aa13.81□□□□□ -0.2
Pcf11-201ENSMUST00000119954 Igkv12-89A0A0G2JGW8 112 aa13.81□□□□□ -0.2
Pcf11-201ENSMUST00000119954 Defb12Q8K4N3 78 aa13.81□□□□□ -0.2
Pcf11-201ENSMUST00000119954 Tln2Q71LX4 2375 aa13.81□□□□□ -0.2
Pcf11-201ENSMUST00000119954 NynrinQ5DTZ0 1840 aa13.81□□□□□ -0.2
Pcf11-201ENSMUST00000119954 AngP21570 145 aa13.8□□□□□ -0.2
Pcf11-201ENSMUST00000119954 Prop1P97458 223 aa13.8□□□□□ -0.2
Pcf11-201ENSMUST00000119954 Cryba4Q9JJV0 196 aa13.8□□□□□ -0.2
Pcf11-201ENSMUST00000119954 Armcx4E9PWM3 2356 aa13.8□□□□□ -0.2
Pcf11-201ENSMUST00000119954 Ighv1-50A0A075B5W1 117 aa13.8□□□□□ -0.2
Pcf11-201ENSMUST00000119954 Nxph4G3X9N5 304 aa13.8□□□□□ -0.2
Pcf11-201ENSMUST00000119954 Gm12253Q5NC48 229 aa13.8□□□□□ -0.2
Pcf11-201ENSMUST00000119954 9930022D16RikQ8BG27 128 aa13.8□□□□□ -0.2
Pcf11-201ENSMUST00000119954 Gm9961Q8BNV2 113 aa13.8□□□□□ -0.2
Pcf11-201ENSMUST00000119954 1700012A03RikQ9DAF1 130 aa13.8□□□□□ -0.2
Pcf11-201ENSMUST00000119954 LitafQ9JLJ0 161 aa13.8□□□□□ -0.2
Pcf11-201ENSMUST00000119954 Tpsg1Q9QUL7 311 aa13.8□□□□□ -0.2
Pcf11-201ENSMUST00000119954 Atp5g3P56384 141 aa13.79□□□□□ -0.2
Pcf11-201ENSMUST00000119954 Atp5g1Q9CR84 136 aa13.79□□□□□ -0.2
Pcf11-201ENSMUST00000119954 Dock9Q8BIK4 2055 aa13.79□□□□□ -0.2
Pcf11-201ENSMUST00000119954 Fhl4Q8CDC8 279 aa13.79□□□□□ -0.2
Pcf11-201ENSMUST00000119954 Fam222aQ6PGH4 453 aa13.79□□□□□ -0.2
Pcf11-201ENSMUST00000119954 Cacna1gQ5SUF7 2381 aa13.79□□□□□ -0.2
Pcf11-201ENSMUST00000119954 Ighv1-74A0A0G2JGK2 117 aa13.78□□□□□ -0.2
Pcf11-201ENSMUST00000119954 Acyp1P56376 99 aa13.78□□□□□ -0.2
Pcf11-201ENSMUST00000119954 Fam216bQ8CC14 138 aa13.78□□□□□ -0.2
Pcf11-201ENSMUST00000119954 Col4a3Q9QZS0 1669 aa13.78□□□□□ -0.2
Pcf11-201ENSMUST00000119954 Trav4-3A0A0B4J1K1 110 aa13.78□□□□□ -0.2
Pcf11-201ENSMUST00000119954 Zfp407G3UVV3 2246 aa13.77□□□□□ -0.2
Pcf11-201ENSMUST00000119954 Thsd7aQ69ZU6 1645 aa13.77□□□□□ -0.2
Pcf11-201ENSMUST00000119954 GfyJ3KML8 504 aa13.77□□□□□ -0.21
Pcf11-201ENSMUST00000119954 Ang3P97802 145 aa13.77□□□□□ -0.21
Pcf11-201ENSMUST00000119954 Lyrm9Q3UN90 78 aa13.77□□□□□ -0.21
Pcf11-201ENSMUST00000119954 Gm10192Q3V0S1 108 aa13.77□□□□□ -0.21
Pcf11-201ENSMUST00000119954 Nop10Q9CQS2 64 aa13.77□□□□□ -0.21
Pcf11-201ENSMUST00000119954 Ahctf1Q8CJF7 2243 aaKnown RBP13.77□□□□□ -0.21
Pcf11-201ENSMUST00000119954 Fhl1P97447 280 aaKnown RBP13.76□□□□□ -0.21
Pcf11-201ENSMUST00000119954 Adamtsl3G3UXC7 1706 aa13.76□□□□□ -0.21
Pcf11-201ENSMUST00000119954 Tmem213Q08EA8 116 aa13.76□□□□□ -0.21
Pcf11-201ENSMUST00000119954 SptssbQ925E8 76 aa13.76□□□□□ -0.21
Pcf11-201ENSMUST00000119954 Bub3Q9WVA3 326 aa13.76□□□□□ -0.21
Pcf11-201ENSMUST00000119954 Gm10295Q8CCF3 114 aa13.76□□□□□ -0.21
Pcf11-201ENSMUST00000119954 Ndufb4Q9CQC7 129 aa13.76□□□□□ -0.21
Pcf11-201ENSMUST00000119954 Ly75Q60767 1723 aa13.76□□□□□ -0.21
Pcf11-201ENSMUST00000119954 Vsig4F6TUL9 280 aa13.75□□□□□ -0.21
Pcf11-201ENSMUST00000119954 Vopp1Q8R1C3 172 aa13.75□□□□□ -0.21
Pcf11-201ENSMUST00000119954 Exph5Q0VAV2 1960 aa13.75□□□□□ -0.21
Pcf11-201ENSMUST00000119954 Tmem254aP0DN89 123 aa13.75□□□□□ -0.21
Pcf11-201ENSMUST00000119954 Tmem254bP0DN90 123 aa13.75□□□□□ -0.21
Pcf11-201ENSMUST00000119954 Tmem254cP0DN91 123 aa13.75□□□□□ -0.21
Pcf11-201ENSMUST00000119954 Ighv1-77A0A0G2JGS9 117 aa13.75□□□□□ -0.21
Pcf11-201ENSMUST00000119954 Gm19410A0A140LJC7 2098 aa13.75□□□□□ -0.21
Pcf11-201ENSMUST00000119954 P01756 117 aa13.74□□□□□ -0.21
Pcf11-201ENSMUST00000119954 P01757 117 aa13.74□□□□□ -0.21
Pcf11-201ENSMUST00000119954 Timm17aQ9Z0V8 171 aa13.74□□□□□ -0.21
Pcf11-201ENSMUST00000119954 Cep295Q8BQ48 2412 aa13.74□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 101.8 ms