RNA–Protein interactions for RNA: ENSMUST00000095476.5

Lig4-201, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 5,028 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-201ENSMUST00000095476 Lamtor3O88653 124 aa8.07□□□□□ -1.12
Lig4-201ENSMUST00000095476 Dpm3Q9D1Q4 92 aa8.07□□□□□ -1.12
Lig4-201ENSMUST00000095476 Ighv1-20A0A0A6YX66 117 aa8.06□□□□□ -1.12
Lig4-201ENSMUST00000095476 Fam110aQ8R184 296 aa8.06□□□□□ -1.12
Lig4-201ENSMUST00000095476 MyofQ69ZN7 2048 aaKnown RBP8.06□□□□□ -1.12
Lig4-201ENSMUST00000095476 Jmjd1cQ69ZK6 2350 aa8.06□□□□□ -1.12
Lig4-201ENSMUST00000095476 Cfap46E9Q2C0 2641 aa8.06□□□□□ -1.12
Lig4-201ENSMUST00000095476 Gm17455G3UW87 128 aa8.06□□□□□ -1.12
Lig4-201ENSMUST00000095476 P04940 107 aa8.06□□□□□ -1.12
Lig4-201ENSMUST00000095476 P04941 107 aa8.06□□□□□ -1.12
Lig4-201ENSMUST00000095476 Adamts9E9PUN6 1931 aa8.06□□□□□ -1.12
Lig4-201ENSMUST00000095476 Plxnd1Q3UH93 1925 aa8.06□□□□□ -1.12
Lig4-201ENSMUST00000095476 3110082J24RikF6Z6Z2 108 aa8.06□□□□□ -1.12
Lig4-201ENSMUST00000095476 P01649 108 aa8.06□□□□□ -1.12
Lig4-201ENSMUST00000095476 Fstl3Q9EQC7 256 aa8.06□□□□□ -1.12
Lig4-201ENSMUST00000095476 Shisal2aA2A9G7 189 aa8.06□□□□□ -1.12
Lig4-201ENSMUST00000095476 Fgf6P21658 208 aa8.06□□□□□ -1.12
Lig4-201ENSMUST00000095476 3110018I06RikQ9CXS0 120 aa8.06□□□□□ -1.12
Lig4-201ENSMUST00000095476 MplkipQ9D011 178 aa8.06□□□□□ -1.12
Lig4-201ENSMUST00000095476 P01630 113 aa8.05□□□□□ -1.12
Lig4-201ENSMUST00000095476 P01723 117 aa8.05□□□□□ -1.12
Lig4-201ENSMUST00000095476 Svs5P30933 122 aa8.05□□□□□ -1.12
Lig4-201ENSMUST00000095476 Odf3Q920N1 254 aa8.05□□□□□ -1.12
Lig4-201ENSMUST00000095476 Gm21060J3KMU4 56 aa8.05□□□□□ -1.12
Lig4-201ENSMUST00000095476 Rmi2Q3UPE3 149 aa8.05□□□□□ -1.12
Lig4-201ENSMUST00000095476 Ifitm1Q9D103 106 aa8.05□□□□□ -1.12
Lig4-201ENSMUST00000095476 Eml5Q8BQM8 1977 aa8.05□□□□□ -1.12
Lig4-201ENSMUST00000095476 Igkv4-62A0A0G2JDW9 117 aa8.05□□□□□ -1.12
Lig4-201ENSMUST00000095476 Igkv4-81A0A0G2JEY5 119 aa8.05□□□□□ -1.12
Lig4-201ENSMUST00000095476 P04942 107 aa8.05□□□□□ -1.12
Lig4-201ENSMUST00000095476 Sptbn2Q68FG2 2388 aa8.05□□□□□ -1.12
Lig4-201ENSMUST00000095476 Gm14137Q8CE97 175 aa8.05□□□□□ -1.12
Lig4-201ENSMUST00000095476 Ighv1-31A0A0A6YWK5 117 aa8.04□□□□□ -1.12
Lig4-201ENSMUST00000095476 Ly6g6dQ9Z1Q3 135 aa8.04□□□□□ -1.12
Lig4-201ENSMUST00000095476 Mrps12O35680 139 aa8.04□□□□□ -1.12
Lig4-201ENSMUST00000095476 March3Q8BRX9 218 aa8.04□□□□□ -1.12
Lig4-201ENSMUST00000095476 Trbv30A0A0B4J1P1 111 aa8.04□□□□□ -1.12
Lig4-201ENSMUST00000095476 P01659 112 aa8.04□□□□□ -1.12
Lig4-201ENSMUST00000095476 Q08AU9 97 aa8.04□□□□□ -1.12
Lig4-201ENSMUST00000095476 Morn5Q9DAI9 170 aa8.04□□□□□ -1.12
Lig4-201ENSMUST00000095476 Gm42715A0A087WP63 3095 aaKnown RBP8.04□□□□□ -1.12
Lig4-201ENSMUST00000095476 Ccl3P10855 92 aa8.04□□□□□ -1.12
Lig4-201ENSMUST00000095476 P18532 116 aa8.04□□□□□ -1.12
Lig4-201ENSMUST00000095476 Defb30Q30KN4 75 aa8.04□□□□□ -1.12
Lig4-201ENSMUST00000095476 Mpv17l2Q8VIK2 200 aa8.04□□□□□ -1.12
Lig4-201ENSMUST00000095476 P01812 117 aa8.03□□□□□ -1.12
Lig4-201ENSMUST00000095476 Cd27P41272 250 aa8.03□□□□□ -1.12
Lig4-201ENSMUST00000095476 Loxl1P97873 607 aa8.03□□□□□ -1.12
Lig4-201ENSMUST00000095476 Ntf4Q80VU4 209 aa8.03□□□□□ -1.12
Lig4-201ENSMUST00000095476 Fam24aQ8CF27 98 aa8.03□□□□□ -1.12
Lig4-201ENSMUST00000095476 Glrp1E9Q9S8 174 aa8.03□□□□□ -1.12
Lig4-201ENSMUST00000095476 Atp6v0e1Q9CQD8 81 aa8.03□□□□□ -1.12
Lig4-201ENSMUST00000095476 Cacna1eQ61290 2272 aa8.03□□□□□ -1.12
Lig4-201ENSMUST00000095476 IgipA0A1B0GR74 53 aa8.03□□□□□ -1.12
Lig4-201ENSMUST00000095476 Gm42674D3YUT9 64 aa8.03□□□□□ -1.12
Lig4-201ENSMUST00000095476 Rpl32P62911 135 aaKnown RBP8.03□□□□□ -1.12
Lig4-201ENSMUST00000095476 Ang2Q64438 145 aa8.03□□□□□ -1.12
Lig4-201ENSMUST00000095476 Usmg5Q78IK2 58 aa8.03□□□□□ -1.12
Lig4-201ENSMUST00000095476 Gm1968Q3T9I3 115 aa8.03□□□□□ -1.12
Lig4-201ENSMUST00000095476 Srsf2Q62093 221 aaKnown RBP8.03□□□□□ -1.12
Lig4-201ENSMUST00000095476 Q9DAQ5 155 aa8.03□□□□□ -1.12
Lig4-201ENSMUST00000095476 Pfn2Q9JJV2 140 aa8.03□□□□□ -1.12
Lig4-201ENSMUST00000095476 Trip12G5E870 2025 aaKnown RBP8.02□□□□□ -1.12
Lig4-201ENSMUST00000095476 Abca1P41233 2261 aa8.02□□□□□ -1.12
Lig4-201ENSMUST00000095476 Akap6E9Q9K8 2307 aa8.02□□□□□ -1.12
Lig4-201ENSMUST00000095476 Ighv1-49A0A0A6YWX2 117 aa8.02□□□□□ -1.13
Lig4-201ENSMUST00000095476 SelenowP63300 88 aa8.02□□□□□ -1.13
Lig4-201ENSMUST00000095476 Tmem86bQ497J1 226 aa8.02□□□□□ -1.13
Lig4-201ENSMUST00000095476 Dazap2Q9DCP9 168 aa8.02□□□□□ -1.13
Lig4-201ENSMUST00000095476 Trav11A0A0B4J1J9 114 aa8.02□□□□□ -1.13
Lig4-201ENSMUST00000095476 Ighv1-77A0A0G2JGS9 117 aa8.02□□□□□ -1.13
Lig4-201ENSMUST00000095476 Inafm2A0A1L1STD6 152 aa8.02□□□□□ -1.13
Lig4-201ENSMUST00000095476 Gm20499D3Z4G5 72 aa8.02□□□□□ -1.13
Lig4-201ENSMUST00000095476 Gp9O88186 177 aa8.02□□□□□ -1.13
Lig4-201ENSMUST00000095476 Taf15Q8BQ46 557 aaKnown RBP8.02□□□□□ -1.13
Lig4-201ENSMUST00000095476 Ndufa11Q9D8B4 141 aa8.02□□□□□ -1.13
Lig4-201ENSMUST00000095476 PoleQ9WVF7 2283 aa8.02□□□□□ -1.13
Lig4-201ENSMUST00000095476 Ighv8-12A0A0G2JDE1 119 aa8.02□□□□□ -1.13
Lig4-201ENSMUST00000095476 GrnP28798 589 aaKnown RBP8.02□□□□□ -1.13
Lig4-201ENSMUST00000095476 Usf3B2RUQ2 2221 aa8.02□□□□□ -1.13
Lig4-201ENSMUST00000095476 Gm12253Q5NC48 229 aa8.02□□□□□ -1.13
Lig4-201ENSMUST00000095476 Tomm7Q9D173 55 aa8.02□□□□□ -1.13
Lig4-201ENSMUST00000095476 Spink12Q9D256 87 aa8.02□□□□□ -1.13
Lig4-201ENSMUST00000095476 Gm44965A0A0N4SVR3 59 aa8.01□□□□□ -1.13
Lig4-201ENSMUST00000095476 Hoxd3P09027 433 aa8.01□□□□□ -1.13
Lig4-201ENSMUST00000095476 Lypd8Q9D7S0 255 aa8.01□□□□□ -1.13
Lig4-201ENSMUST00000095476 Egr1P08046 533 aa8.01□□□□□ -1.13
Lig4-201ENSMUST00000095476 Minos1Q7TNS2 76 aa8.01□□□□□ -1.13
Lig4-201ENSMUST00000095476 Smim10l1A0A087WNQ7 89 aa8.01□□□□□ -1.13
Lig4-201ENSMUST00000095476 Crip1P63254 77 aa8.01□□□□□ -1.13
Lig4-201ENSMUST00000095476 Fam216bQ8CC14 138 aa8.01□□□□□ -1.13
Lig4-201ENSMUST00000095476 Tpsg1Q9QUL7 311 aa8.01□□□□□ -1.13
Lig4-201ENSMUST00000095476 Igf1P05017 153 aa8□□□□□ -1.13
Lig4-201ENSMUST00000095476 Pip4p2Q9CZX7 257 aa8□□□□□ -1.13
Lig4-201ENSMUST00000095476 Timm17aQ9Z0V8 171 aa8□□□□□ -1.13
Lig4-201ENSMUST00000095476 Dennd4cA6H8H2 1906 aa8□□□□□ -1.13
Lig4-201ENSMUST00000095476 Gm20730A0A075B5J6 119 aa8□□□□□ -1.13
Lig4-201ENSMUST00000095476 Prok1Q14A28 105 aa8□□□□□ -1.13
Lig4-201ENSMUST00000095476 Gm5941Q497P9 117 aa8□□□□□ -1.13
Lig4-201ENSMUST00000095476 Defb29Q8BGW9 78 aa8□□□□□ -1.13
Retrieved 100 of 22,080 RNA–protein pairs in 31.2 ms