RNA–Protein interactions for RNA: ENST00000641880.1

CASC19-263, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,404 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-263ENST00000641880 KRTAP10-7P60409 375 aaPredicted RBP3.78□□□□□ -1.8
CASC19-263ENST00000641880 USH2AO75445 5202 aa3.78□□□□□ -1.8
CASC19-263ENST00000641880 KRTAP19-6Q3LI70 58 aa3.76□□□□□ -1.81
CASC19-263ENST00000641880 KRTAP5-11Q6L8G4 156 aa3.74□□□□□ -1.81
CASC19-263ENST00000641880 MT3P25713 68 aa3.73□□□□□ -1.81
CASC19-263ENST00000641880 KRTAP10-12P60413 245 aa3.71□□□□□ -1.82
CASC19-263ENST00000641880 SSPOA2VEC9 5147 aa3.67□□□□□ -1.82
CASC19-263ENST00000641880 KRTAP8-1Q8IUC2 63 aa3.65□□□□□ -1.83
CASC19-263ENST00000641880 LCE3AQ5TA76 89 aa3.64□□□□□ -1.83
CASC19-263ENST00000641880 LCE1EQ5T753 118 aa3.61□□□□□ -1.83
CASC19-263ENST00000641880 FSIP2Q5CZC0 6907 aa3.58□□□□□ -1.84
CASC19-263ENST00000641880 KRTAP12-3P60328 96 aa3.57□□□□□ -1.84
CASC19-263ENST00000641880 LCE1FQ5T754 118 aa3.55□□□□□ -1.84
CASC19-263ENST00000641880 CRCT1Q9UGL9 99 aa3.53□□□□□ -1.84
CASC19-263ENST00000641880 KRTAP5-9P26371 169 aa3.52□□□□□ -1.85
CASC19-263ENST00000641880 FCGBPQ9Y6R7 5405 aaPredicted RBP3.5□□□□□ -1.85
CASC19-263ENST00000641880 KRTAP19-5Q3LI72 72 aa3.47□□□□□ -1.85
CASC19-263ENST00000641880 KRTAP5-4Q6L8H1 288 aa3.44□□□□□ -1.86
CASC19-263ENST00000641880 KRTAP5-1Q6L8H4 278 aa3.44□□□□□ -1.86
CASC19-263ENST00000641880 KRTAP19-7Q3SYF9 63 aa3.42□□□□□ -1.86
CASC19-263ENST00000641880 KMT2DO14686 5537 aa3.39□□□□□ -1.87
CASC19-263ENST00000641880 LUZP6Q538Z0 58 aa3.39□□□□□ -1.87
CASC19-263ENST00000641880 MT1EP04732 61 aa3.37□□□□□ -1.87
CASC19-263ENST00000641880 SPRR5A0A1B0GTR4 108 aa3.36□□□□□ -1.87
CASC19-263ENST00000641880 LCE3CQ5T5A8 94 aa3.36□□□□□ -1.87
CASC19-263ENST00000641880 KRTAP4-4Q9BYR3 166 aa3.35□□□□□ -1.87
CASC19-263ENST00000641880 MACF1Q9UPN3 7388 aaKnown RBP3.31□□□□□ -1.88
CASC19-263ENST00000641880 MT1LQ93083 61 aa3.31□□□□□ -1.88
CASC19-263ENST00000641880 SPRR2FQ96RM1 72 aa3.31□□□□□ -1.88
CASC19-263ENST00000641880 MT1GP13640 62 aa3.3□□□□□ -1.88
CASC19-263ENST00000641880 KRTAP19-3Q7Z4W3 81 aa3.28□□□□□ -1.88
CASC19-263ENST00000641880 KRTAP6-3Q3LI67 103 aa3.25□□□□□ -1.89
CASC19-263ENST00000641880 SYNE2Q8WXH0 6885 aaKnown RBP3.22□□□□□ -1.89
CASC19-263ENST00000641880 MT1MQ8N339 61 aa3.18□□□□□ -1.9
CASC19-263ENST00000641880 MUC12Q9UKN1 5478 aa3.18□□□□□ -1.9
CASC19-263ENST00000641880 SPRR2EP22531 72 aa3.14□□□□□ -1.91
CASC19-263ENST00000641880 SPRR2BP35325 72 aa3.14□□□□□ -1.91
CASC19-263ENST00000641880 SPRR2AP35326 72 aa3.14□□□□□ -1.91
CASC19-263ENST00000641880 KRTAP9-6A8MVA2 160 aa3.13□□□□□ -1.91
CASC19-263ENST00000641880 MDN1Q9NU22 5596 aa3.09□□□□□ -1.92
CASC19-263ENST00000641880 LCE3EQ5T5B0 92 aa3.09□□□□□ -1.92
CASC19-263ENST00000641880 SPRR2DP22532 72 aa3.03□□□□□ -1.92
CASC19-263ENST00000641880 KRTAP4-3Q9BYR4 195 aa3.01□□□□□ -1.93
CASC19-263ENST00000641880 NEBP20929 6669 aa2.96□□□□□ -1.94
CASC19-263ENST00000641880 KRTAP5-2Q701N4 177 aa2.93□□□□□ -1.94
CASC19-263ENST00000641880 DSTQ03001 7570 aaKnown RBP2.91□□□□□ -1.94
CASC19-263ENST00000641880 KRTAP2-3P0C7H8 128 aa2.91□□□□□ -1.94
CASC19-263ENST00000641880 KRTAP2-4Q9BYR9 128 aa2.91□□□□□ -1.94
CASC19-263ENST00000641880 KRTAP2-1Q9BYU5 128 aa2.91□□□□□ -1.94
CASC19-263ENST00000641880 KRTAP5-5Q701N2 237 aaPredicted RBP2.86□□□□□ -1.95
CASC19-263ENST00000641880 MT1AP04731 61 aa2.85□□□□□ -1.95
CASC19-263ENST00000641880 OBSCNQ5VST9 7968 aa2.83□□□□□ -1.96
CASC19-263ENST00000641880 INE1O15225 51 aa2.76□□□□□ -1.97
CASC19-263ENST00000641880 KRTAP12-4P60329 112 aa2.76□□□□□ -1.97
CASC19-263ENST00000641880 KRTAP20-1Q3LI63 56 aa2.76□□□□□ -1.97
CASC19-263ENST00000641880 KRTAP6-1Q3LI64 71 aa2.76□□□□□ -1.97
CASC19-263ENST00000641880 SYNE1Q8NF91 8797 aaKnown RBP2.69□□□□□ -1.98
CASC19-263ENST00000641880 LCE3DQ9BYE3 92 aa2.67□□□□□ -1.98
CASC19-263ENST00000641880 MT4P47944 62 aa2.58□□□□□ -2
CASC19-263ENST00000641880 KRTAP5-8O75690 187 aa2.56□□□□□ -2
CASC19-263ENST00000641880 KRTAP20-2Q3LI61 65 aa2.55□□□□□ -2
CASC19-263ENST00000641880 KRTAP6-2Q3LI66 62 aa2.55□□□□□ -2
CASC19-263ENST00000641880 HMCN1Q96RW7 5635 aa2.51□□□□□ -2.01
CASC19-263ENST00000641880 LCE1CQ5T751 118 aa2.35□□□□□ -2.03
CASC19-263ENST00000641880 LCE1BQ5T7P3 118 aa2.35□□□□□ -2.03
CASC19-263ENST00000641880 GPR98Q8WXG9 6306 aa2.25□□□□□ -2.05
CASC19-263ENST00000641880 AHNAK2Q8IVF2 5795 aa2.22□□□□□ -2.05
CASC19-263ENST00000641880 KRTAP5-10Q6L8G5 202 aa2.11□□□□□ -2.07
CASC19-263ENST00000641880 KRTAP5-7Q6L8G8 165 aa2.11□□□□□ -2.07
CASC19-263ENST00000641880 PRM1P04553 51 aa2.09□□□□□ -2.07
CASC19-263ENST00000641880 MUC5ACP98088 5654 aa2.05□□□□□ -2.08
CASC19-263ENST00000641880 MUC19Q7Z5P9 8384 aa1.93□□□□□ -2.1
CASC19-263ENST00000641880 MUC5BQ9HC84 5762 aaPredicted RBP1.83□□□□□ -2.12
CASC19-263ENST00000641880 KRTAP21-2Q3LI59 83 aa1.82□□□□□ -2.12
CASC19-263ENST00000641880 AHNAKQ09666 5890 aaKnown RBP1.71□□□□□ -2.13
CASC19-263ENST00000641880 PHGR1C9JFL3 82 aa1.57□□□□□ -2.16
CASC19-263ENST00000641880 KRTAP21-1Q3LI58 79 aa1.31□□□□□ -2.2
CASC19-263ENST00000641880 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 11.1 ms