RNA–Protein interactions for RNA: ENST00000641828.1

CASC19-260, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 2,001 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-260ENST00000641828 LCE1EQ5T753 118 aa2.63□□□□□ -1.99
CASC19-260ENST00000641828 SSPOA2VEC9 5147 aa2.63□□□□□ -1.99
CASC19-260ENST00000641828 SYNE2Q8WXH0 6885 aaKnown RBP2.62□□□□□ -1.99
CASC19-260ENST00000641828 INE1O15225 51 aa2.61□□□□□ -1.99
CASC19-260ENST00000641828 KRTAP20-1Q3LI63 56 aa2.61□□□□□ -1.99
CASC19-260ENST00000641828 KRTAP10-7P60409 375 aaPredicted RBP2.58□□□□□ -2
CASC19-260ENST00000641828 MUC17Q685J3 4493 aa2.58□□□□□ -2
CASC19-260ENST00000641828 TNP1P09430 55 aa2.58□□□□□ -2
CASC19-260ENST00000641828 MACF1Q9UPN3 7388 aaKnown RBP2.56□□□□□ -2
CASC19-260ENST00000641828 MT1HP80294 61 aa2.56□□□□□ -2
CASC19-260ENST00000641828 KRTAP6-3Q3LI67 103 aa2.56□□□□□ -2
CASC19-260ENST00000641828 KRTAP5-2Q701N4 177 aa2.56□□□□□ -2
CASC19-260ENST00000641828 USH2AO75445 5202 aa2.56□□□□□ -2
CASC19-260ENST00000641828 FCGBPQ9Y6R7 5405 aaPredicted RBP2.55□□□□□ -2
CASC19-260ENST00000641828 M0R2T5 61 aa2.55□□□□□ -2
CASC19-260ENST00000641828 NEBP20929 6669 aa2.53□□□□□ -2
CASC19-260ENST00000641828 KRTAP4-1Q9BYQ7 146 aa2.53□□□□□ -2
CASC19-260ENST00000641828 FLGP20930 4061 aaPredicted RBP2.47□□□□□ -2.01
CASC19-260ENST00000641828 KRTAP19-2Q3LHN2 52 aa2.46□□□□□ -2.02
CASC19-260ENST00000641828 KRTAP9-6A8MVA2 160 aa2.44□□□□□ -2.02
CASC19-260ENST00000641828 KRTAP2-3P0C7H8 128 aa2.41□□□□□ -2.02
CASC19-260ENST00000641828 KRTAP2-4Q9BYR9 128 aa2.41□□□□□ -2.02
CASC19-260ENST00000641828 GPR98Q8WXG9 6306 aa2.37□□□□□ -2.03
CASC19-260ENST00000641828 KRTAP5-8O75690 187 aa2.37□□□□□ -2.03
CASC19-260ENST00000641828 KRTAP19-6Q3LI70 58 aa2.36□□□□□ -2.03
CASC19-260ENST00000641828 LCE3AQ5TA76 89 aa2.35□□□□□ -2.03
CASC19-260ENST00000641828 KRTAP8-1Q8IUC2 63 aa2.34□□□□□ -2.03
CASC19-260ENST00000641828 MUC12Q9UKN1 5478 aa2.31□□□□□ -2.04
CASC19-260ENST00000641828 LCE3DQ9BYE3 92 aa2.31□□□□□ -2.04
CASC19-260ENST00000641828 SPRR2GQ9BYE4 73 aa2.3□□□□□ -2.04
CASC19-260ENST00000641828 KRTAP2-1Q9BYU5 128 aa2.3□□□□□ -2.04
CASC19-260ENST00000641828 KMT2DO14686 5537 aa2.28□□□□□ -2.04
CASC19-260ENST00000641828 MT2AP02795 61 aa2.28□□□□□ -2.04
CASC19-260ENST00000641828 KRTAP10-10P60014 251 aa2.27□□□□□ -2.05
CASC19-260ENST00000641828 MT1FP04733 61 aa2.25□□□□□ -2.05
CASC19-260ENST00000641828 KRTAP12-3P60328 96 aa2.25□□□□□ -2.05
CASC19-260ENST00000641828 KRTAP4-3Q9BYR4 195 aa2.24□□□□□ -2.05
CASC19-260ENST00000641828 SPRR2EP22531 72 aa2.19□□□□□ -2.06
CASC19-260ENST00000641828 SPRR2BP35325 72 aa2.19□□□□□ -2.06
CASC19-260ENST00000641828 SPRR2AP35326 72 aa2.19□□□□□ -2.06
CASC19-260ENST00000641828 MDN1Q9NU22 5596 aa2.16□□□□□ -2.06
CASC19-260ENST00000641828 KRTAP19-8Q3LI54 63 aa2.14□□□□□ -2.07
CASC19-260ENST00000641828 SPRR2DP22532 72 aa2.13□□□□□ -2.07
CASC19-260ENST00000641828 MT1XP80297 61 aa2.13□□□□□ -2.07
CASC19-260ENST00000641828 SPRR2FQ96RM1 72 aa2.11□□□□□ -2.07
CASC19-260ENST00000641828 OBSCNQ5VST9 7968 aa2.08□□□□□ -2.08
CASC19-260ENST00000641828 MT1BP07438 61 aa2.07□□□□□ -2.08
CASC19-260ENST00000641828 KRTAP19-5Q3LI72 72 aa2.05□□□□□ -2.08
CASC19-260ENST00000641828 KRTAP5-10Q6L8G5 202 aa2.01□□□□□ -2.09
CASC19-260ENST00000641828 KRTAP5-7Q6L8G8 165 aa2□□□□□ -2.09
CASC19-260ENST00000641828 DSTQ03001 7570 aaKnown RBP1.99□□□□□ -2.09
CASC19-260ENST00000641828 AHNAK2Q8IVF2 5795 aa1.99□□□□□ -2.09
CASC19-260ENST00000641828 KRTAP5-5Q701N2 237 aaPredicted RBP1.94□□□□□ -2.1
CASC19-260ENST00000641828 KRTAP12-4P60329 112 aa1.93□□□□□ -2.1
CASC19-260ENST00000641828 MT4P47944 62 aa1.9□□□□□ -2.11
CASC19-260ENST00000641828 KRTAP19-7Q3SYF9 63 aa1.9□□□□□ -2.11
CASC19-260ENST00000641828 AHNAKQ09666 5890 aaKnown RBP1.87□□□□□ -2.11
CASC19-260ENST00000641828 MT1LQ93083 61 aa1.86□□□□□ -2.11
CASC19-260ENST00000641828 MT1EP04732 61 aa1.84□□□□□ -2.11
CASC19-260ENST00000641828 MUC5BQ9HC84 5762 aaPredicted RBP1.84□□□□□ -2.11
CASC19-260ENST00000641828 LCE1CQ5T751 118 aa1.78□□□□□ -2.13
CASC19-260ENST00000641828 LCE1BQ5T7P3 118 aa1.78□□□□□ -2.13
CASC19-260ENST00000641828 MT1AP04731 61 aa1.76□□□□□ -2.13
CASC19-260ENST00000641828 MT1GP13640 62 aa1.75□□□□□ -2.13
CASC19-260ENST00000641828 PRM1P04553 51 aa1.73□□□□□ -2.13
CASC19-260ENST00000641828 MUC5ACP98088 5654 aa1.71□□□□□ -2.14
CASC19-260ENST00000641828 MT1MQ8N339 61 aa1.69□□□□□ -2.14
CASC19-260ENST00000641828 SYNE1Q8NF91 8797 aaKnown RBP1.68□□□□□ -2.14
CASC19-260ENST00000641828 KRTAP19-3Q7Z4W3 81 aa1.66□□□□□ -2.14
CASC19-260ENST00000641828 KRTAP20-2Q3LI61 65 aa1.63□□□□□ -2.15
CASC19-260ENST00000641828 KRTAP6-2Q3LI66 62 aa1.59□□□□□ -2.16
CASC19-260ENST00000641828 KRTAP6-1Q3LI64 71 aa1.58□□□□□ -2.16
CASC19-260ENST00000641828 MUC19Q7Z5P9 8384 aa1.33□□□□□ -2.2
CASC19-260ENST00000641828 KRTAP21-2Q3LI59 83 aa1.23□□□□□ -2.21
CASC19-260ENST00000641828 PHGR1C9JFL3 82 aa1.23□□□□□ -2.21
CASC19-260ENST00000641828 KRTAP21-1Q3LI58 79 aa1.14□□□□□ -2.23
CASC19-260ENST00000641828 MUC16Q8WXI7 14507 aa0.72□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 90.5 ms