RNA–Protein interactions for RNA: ENST00000641674.1

CASC19-248, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,356 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-248ENST00000641674 PRO2289Q9P1D8 64 aa2.95□□□□□ -1.94
CASC19-248ENST00000641674 FSIP2Q5CZC0 6907 aa2.9□□□□□ -1.94
CASC19-248ENST00000641674 H0YAA0 97 aa2.9□□□□□ -1.94
CASC19-248ENST00000641674 CRIPTQ9P021 101 aa2.88□□□□□ -1.95
CASC19-248ENST00000641674 PLAC4Q8WY50 150 aa2.86□□□□□ -1.95
CASC19-248ENST00000641674 R4GN34 69 aa2.85□□□□□ -1.95
CASC19-248ENST00000641674 H1FX-AS1Q4G0G2 97 aa2.84□□□□□ -1.96
CASC19-248ENST00000641674 INE1O15225 51 aa2.81□□□□□ -1.96
CASC19-248ENST00000641674 FLGP20930 4061 aaPredicted RBP2.79□□□□□ -1.96
CASC19-248ENST00000641674 KRTAP10-10P60014 251 aa2.77□□□□□ -1.97
CASC19-248ENST00000641674 MT2AP02795 61 aa2.74□□□□□ -1.97
CASC19-248ENST00000641674 C10orf95Q9H7T3 257 aa2.74□□□□□ -1.97
CASC19-248ENST00000641674 MT1FP04733 61 aa2.72□□□□□ -1.97
CASC19-248ENST00000641674 USH2AO75445 5202 aa2.68□□□□□ -1.98
CASC19-248ENST00000641674 MUC19Q7Z5P9 8384 aa2.67□□□□□ -1.98
CASC19-248ENST00000641674 SSPOA2VEC9 5147 aa2.65□□□□□ -1.98
CASC19-248ENST00000641674 FCGBPQ9Y6R7 5405 aaPredicted RBP2.65□□□□□ -1.99
CASC19-248ENST00000641674 KRTAP19-6Q3LI70 58 aa2.64□□□□□ -1.99
CASC19-248ENST00000641674 LCE3DQ9BYE3 92 aa2.64□□□□□ -1.99
CASC19-248ENST00000641674 PP632Q6XCG6 107 aa2.63□□□□□ -1.99
CASC19-248ENST00000641674 S4R3F8 94 aa2.62□□□□□ -1.99
CASC19-248ENST00000641674 MACF1Q9UPN3 7388 aaKnown RBP2.59□□□□□ -2
CASC19-248ENST00000641674 KRTAP6-3Q3LI67 103 aa2.58□□□□□ -2
CASC19-248ENST00000641674 KRTAP13-4Q3LI77 160 aa2.57□□□□□ -2
CASC19-248ENST00000641674 KRTAP5-7Q6L8G8 165 aa2.57□□□□□ -2
CASC19-248ENST00000641674 A0A0D9SG42 100 aa2.56□□□□□ -2
CASC19-248ENST00000641674 SYNE2Q8WXH0 6885 aaKnown RBP2.54□□□□□ -2
CASC19-248ENST00000641674 SPRR5A0A1B0GTR4 108 aa2.53□□□□□ -2
CASC19-248ENST00000641674 M0QZ58 72 aa2.53□□□□□ -2
CASC19-248ENST00000641674 KRTAP12-1P59990 96 aa2.5□□□□□ -2.01
CASC19-248ENST00000641674 SPRR2GQ9BYE4 73 aa2.49□□□□□ -2.01
CASC19-248ENST00000641674 KRTAP19-8Q3LI54 63 aa2.49□□□□□ -2.01
CASC19-248ENST00000641674 MT1BP07438 61 aa2.48□□□□□ -2.01
CASC19-248ENST00000641674 KRTAP20-1Q3LI63 56 aa2.42□□□□□ -2.02
CASC19-248ENST00000641674 MUC12Q9UKN1 5478 aa2.37□□□□□ -2.03
CASC19-248ENST00000641674 KRTAP2-3P0C7H8 128 aa2.36□□□□□ -2.03
CASC19-248ENST00000641674 NEBP20929 6669 aa2.36□□□□□ -2.03
CASC19-248ENST00000641674 KRTAP2-4Q9BYR9 128 aa2.36□□□□□ -2.03
CASC19-248ENST00000641674 SPRR2FQ96RM1 72 aa2.35□□□□□ -2.03
CASC19-248ENST00000641674 SPRR2EP22531 72 aa2.33□□□□□ -2.04
CASC19-248ENST00000641674 SPRR2BP35325 72 aa2.33□□□□□ -2.04
CASC19-248ENST00000641674 SPRR2AP35326 72 aa2.33□□□□□ -2.04
CASC19-248ENST00000641674 KRTAP8-1Q8IUC2 63 aa2.33□□□□□ -2.04
CASC19-248ENST00000641674 KMT2DO14686 5537 aa2.31□□□□□ -2.04
CASC19-248ENST00000641674 MT1XP80297 61 aa2.31□□□□□ -2.04
CASC19-248ENST00000641674 KRTAP21-2Q3LI59 83 aa2.28□□□□□ -2.04
CASC19-248ENST00000641674 KRTAP2-1Q9BYU5 128 aa2.28□□□□□ -2.04
CASC19-248ENST00000641674 MDN1Q9NU22 5596 aa2.28□□□□□ -2.04
CASC19-248ENST00000641674 TNP1P09430 55 aa2.25□□□□□ -2.05
CASC19-248ENST00000641674 SPRR2DP22532 72 aa2.25□□□□□ -2.05
CASC19-248ENST00000641674 GPR98Q8WXG9 6306 aa2.19□□□□□ -2.06
CASC19-248ENST00000641674 HMCN1Q96RW7 5635 aa2.11□□□□□ -2.07
CASC19-248ENST00000641674 DSTQ03001 7570 aaKnown RBP2.07□□□□□ -2.08
CASC19-248ENST00000641674 KRTAP19-3Q7Z4W3 81 aa2.07□□□□□ -2.08
CASC19-248ENST00000641674 KRTAP19-7Q3SYF9 63 aa2.06□□□□□ -2.08
CASC19-248ENST00000641674 MT1EP04732 61 aa2.05□□□□□ -2.08
CASC19-248ENST00000641674 MT1GP13640 62 aa2.04□□□□□ -2.08
CASC19-248ENST00000641674 KRTAP19-5Q3LI72 72 aa2.01□□□□□ -2.09
CASC19-248ENST00000641674 KRTAP12-3P60328 96 aa2□□□□□ -2.09
CASC19-248ENST00000641674 MT4P47944 62 aa1.97□□□□□ -2.09
CASC19-248ENST00000641674 MT1MQ8N339 61 aa1.97□□□□□ -2.09
CASC19-248ENST00000641674 MT1LQ93083 61 aa1.96□□□□□ -2.1
CASC19-248ENST00000641674 AHNAK2Q8IVF2 5795 aa1.92□□□□□ -2.1
CASC19-248ENST00000641674 KRTAP12-4P60329 112 aa1.88□□□□□ -2.11
CASC19-248ENST00000641674 KRTAP5-10Q6L8G5 202 aa1.86□□□□□ -2.11
CASC19-248ENST00000641674 KRTAP20-2Q3LI61 65 aa1.81□□□□□ -2.12
CASC19-248ENST00000641674 AHNAKQ09666 5890 aaKnown RBP1.67□□□□□ -2.14
CASC19-248ENST00000641674 MT1AP04731 61 aa1.67□□□□□ -2.14
CASC19-248ENST00000641674 SYNE1Q8NF91 8797 aaKnown RBP1.67□□□□□ -2.14
CASC19-248ENST00000641674 MUC5BQ9HC84 5762 aaPredicted RBP1.66□□□□□ -2.14
CASC19-248ENST00000641674 KRTAP6-1Q3LI64 71 aa1.65□□□□□ -2.15
CASC19-248ENST00000641674 MUC5ACP98088 5654 aa1.61□□□□□ -2.15
CASC19-248ENST00000641674 KRTAP6-2Q3LI66 62 aa1.6□□□□□ -2.15
CASC19-248ENST00000641674 PRM1P04553 51 aa1.59□□□□□ -2.16
CASC19-248ENST00000641674 KRTAP21-1Q3LI58 79 aa1.13□□□□□ -2.23
CASC19-248ENST00000641674 PHGR1C9JFL3 82 aa1.11□□□□□ -2.23
CASC19-248ENST00000641674 MUC16Q8WXI7 14507 aa1.05□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 5.8 ms