RNA–Protein interactions for RNA: ENST00000641642.1

CASC19-247, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,107 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-247ENST00000641642 CDC42SE1Q9NRR8 79 aa4.31□□□□□ -1.72
CASC19-247ENST00000641642 MT1XP80297 61 aa4.3□□□□□ -1.72
CASC19-247ENST00000641642 SSPOA2VEC9 5147 aa4.28□□□□□ -1.72
CASC19-247ENST00000641642 OBSCNQ5VST9 7968 aa4.23□□□□□ -1.73
CASC19-247ENST00000641642 FCGBPQ9Y6R7 5405 aaPredicted RBP4.16□□□□□ -1.74
CASC19-247ENST00000641642 BRK1Q8WUW1 75 aa4.15□□□□□ -1.75
CASC19-247ENST00000641642 LCE3CQ5T5A8 94 aa4.14□□□□□ -1.75
CASC19-247ENST00000641642 C10orf95Q9H7T3 257 aa4.13□□□□□ -1.75
CASC19-247ENST00000641642 TNP1P09430 55 aa4.12□□□□□ -1.75
CASC19-247ENST00000641642 KRTAP25-1Q3LHN0 102 aa4.07□□□□□ -1.76
CASC19-247ENST00000641642 ROMO1P60602 79 aa4.06□□□□□ -1.76
CASC19-247ENST00000641642 KRTAP4-3Q9BYR4 195 aa4.06□□□□□ -1.76
CASC19-247ENST00000641642 KRTAP5-2Q701N4 177 aa4.04□□□□□ -1.76
CASC19-247ENST00000641642 MACF1Q9UPN3 7388 aaKnown RBP4.03□□□□□ -1.76
CASC19-247ENST00000641642 PRO0628Q9UI54 55 aa4□□□□□ -1.77
CASC19-247ENST00000641642 KRTAP6-3Q3LI67 103 aa3.99□□□□□ -1.77
CASC19-247ENST00000641642 KRTAP8-1Q8IUC2 63 aa3.98□□□□□ -1.77
CASC19-247ENST00000641642 PMAIP1Q13794 54 aa3.95□□□□□ -1.78
CASC19-247ENST00000641642 A0A0A0MQY5 61 aa3.93□□□□□ -1.78
CASC19-247ENST00000641642 PP632Q6XCG6 107 aa3.91□□□□□ -1.78
CASC19-247ENST00000641642 LCE3AQ5TA76 89 aa3.9□□□□□ -1.79
CASC19-247ENST00000641642 SPRR2FQ96RM1 72 aa3.87□□□□□ -1.79
CASC19-247ENST00000641642 KMT2DO14686 5537 aa3.87□□□□□ -1.79
CASC19-247ENST00000641642 SYNE2Q8WXH0 6885 aaKnown RBP3.86□□□□□ -1.79
CASC19-247ENST00000641642 KRTAP19-7Q3SYF9 63 aa3.84□□□□□ -1.79
CASC19-247ENST00000641642 KRTAP19-5Q3LI72 72 aa3.81□□□□□ -1.8
CASC19-247ENST00000641642 MT1EP04732 61 aa3.79□□□□□ -1.8
CASC19-247ENST00000641642 KRTAP12-3P60328 96 aa3.79□□□□□ -1.8
CASC19-247ENST00000641642 LCE3EQ5T5B0 92 aa3.76□□□□□ -1.81
CASC19-247ENST00000641642 SVIPQ8NHG7 77 aa3.76□□□□□ -1.81
CASC19-247ENST00000641642 SPRR2EP22531 72 aa3.73□□□□□ -1.81
CASC19-247ENST00000641642 SPRR2BP35325 72 aa3.73□□□□□ -1.81
CASC19-247ENST00000641642 SPRR2AP35326 72 aa3.73□□□□□ -1.81
CASC19-247ENST00000641642 KTN1-AS1Q86SY8 53 aa3.73□□□□□ -1.81
CASC19-247ENST00000641642 KRTAP19-3Q7Z4W3 81 aa3.71□□□□□ -1.82
CASC19-247ENST00000641642 MT1GP13640 62 aa3.69□□□□□ -1.82
CASC19-247ENST00000641642 MT1LQ93083 61 aa3.68□□□□□ -1.82
CASC19-247ENST00000641642 MUC12Q9UKN1 5478 aa3.68□□□□□ -1.82
CASC19-247ENST00000641642 PRAC1Q96KF2 57 aa3.63□□□□□ -1.83
CASC19-247ENST00000641642 NEBP20929 6669 aa3.61□□□□□ -1.83
CASC19-247ENST00000641642 SPRR2DP22532 72 aa3.6□□□□□ -1.83
CASC19-247ENST00000641642 KRTAP5-5Q701N2 237 aaPredicted RBP3.6□□□□□ -1.83
CASC19-247ENST00000641642 MT1MQ8N339 61 aa3.58□□□□□ -1.84
CASC19-247ENST00000641642 MDN1Q9NU22 5596 aa3.58□□□□□ -1.84
CASC19-247ENST00000641642 KRTAP2-3P0C7H8 128 aa3.53□□□□□ -1.84
CASC19-247ENST00000641642 KRTAP2-4Q9BYR9 128 aa3.53□□□□□ -1.84
CASC19-247ENST00000641642 NDUFAF8A1L188 74 aa3.5□□□□□ -1.85
CASC19-247ENST00000641642 KRTAP20-1Q3LI63 56 aa3.5□□□□□ -1.85
CASC19-247ENST00000641642 KRTAP2-1Q9BYU5 128 aa3.44□□□□□ -1.86
CASC19-247ENST00000641642 LCE1CQ5T751 118 aa3.4□□□□□ -1.87
CASC19-247ENST00000641642 LCE1BQ5T7P3 118 aa3.4□□□□□ -1.87
CASC19-247ENST00000641642 DSTQ03001 7570 aaKnown RBP3.39□□□□□ -1.87
CASC19-247ENST00000641642 KRTAP5-8O75690 187 aa3.39□□□□□ -1.87
CASC19-247ENST00000641642 SPRR5A0A1B0GTR4 108 aa3.32□□□□□ -1.88
CASC19-247ENST00000641642 MT1AP04731 61 aa3.16□□□□□ -1.9
CASC19-247ENST00000641642 LUZP6Q538Z0 58 aa3.14□□□□□ -1.91
CASC19-247ENST00000641642 KRTAP12-4P60329 112 aa3.13□□□□□ -1.91
CASC19-247ENST00000641642 MT4P47944 62 aa3.09□□□□□ -1.91
CASC19-247ENST00000641642 KRTAP6-1Q3LI64 71 aa3.07□□□□□ -1.92
CASC19-247ENST00000641642 SYNE1Q8NF91 8797 aaKnown RBP3.02□□□□□ -1.93
CASC19-247ENST00000641642 KRTAP20-2Q3LI61 65 aa3.01□□□□□ -1.93
CASC19-247ENST00000641642 HMCN1Q96RW7 5635 aa2.94□□□□□ -1.94
CASC19-247ENST00000641642 MUC19Q7Z5P9 8384 aa2.92□□□□□ -1.94
CASC19-247ENST00000641642 LCE3DQ9BYE3 92 aa2.9□□□□□ -1.95
CASC19-247ENST00000641642 KRTAP6-2Q3LI66 62 aa2.87□□□□□ -1.95
CASC19-247ENST00000641642 KRTAP5-7Q6L8G8 165 aa2.81□□□□□ -1.96
CASC19-247ENST00000641642 KRTAP5-10Q6L8G5 202 aa2.72□□□□□ -1.97
CASC19-247ENST00000641642 AHNAK2Q8IVF2 5795 aa2.69□□□□□ -1.98
CASC19-247ENST00000641642 GPR98Q8WXG9 6306 aa2.59□□□□□ -1.99
CASC19-247ENST00000641642 KRTAP21-2Q3LI59 83 aa2.46□□□□□ -2.02
CASC19-247ENST00000641642 INE1O15225 51 aa2.41□□□□□ -2.02
CASC19-247ENST00000641642 MUC5ACP98088 5654 aa2.33□□□□□ -2.04
CASC19-247ENST00000641642 MUC5BQ9HC84 5762 aaPredicted RBP2.15□□□□□ -2.06
CASC19-247ENST00000641642 AHNAKQ09666 5890 aaKnown RBP2.07□□□□□ -2.08
CASC19-247ENST00000641642 PRM1P04553 51 aa2.06□□□□□ -2.08
CASC19-247ENST00000641642 PHGR1C9JFL3 82 aa1.82□□□□□ -2.12
CASC19-247ENST00000641642 KRTAP21-1Q3LI58 79 aa1.25□□□□□ -2.21
CASC19-247ENST00000641642 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 22.9 ms