RNA–Protein interactions for RNA: ENST00000641421.1

CASC19-230, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,530 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-230ENST00000641421 SPRR5A0A1B0GTR4 108 aa4.04□□□□□ -1.76
CASC19-230ENST00000641421 USH2AO75445 5202 aa4.04□□□□□ -1.76
CASC19-230ENST00000641421 KRTAP19-6Q3LI70 58 aa4.02□□□□□ -1.77
CASC19-230ENST00000641421 LUZP6Q538Z0 58 aa4.02□□□□□ -1.77
CASC19-230ENST00000641421 KRTAP19-5Q3LI72 72 aa4□□□□□ -1.77
CASC19-230ENST00000641421 SSPOA2VEC9 5147 aa3.92□□□□□ -1.78
CASC19-230ENST00000641421 KRTAP19-7Q3SYF9 63 aa3.88□□□□□ -1.79
CASC19-230ENST00000641421 LCE3CQ5T5A8 94 aa3.84□□□□□ -1.8
CASC19-230ENST00000641421 MT1EP04732 61 aa3.8□□□□□ -1.8
CASC19-230ENST00000641421 MT1LQ93083 61 aa3.77□□□□□ -1.81
CASC19-230ENST00000641421 KMT2DO14686 5537 aa3.77□□□□□ -1.81
CASC19-230ENST00000641421 FCGBPQ9Y6R7 5405 aaPredicted RBP3.67□□□□□ -1.82
CASC19-230ENST00000641421 FSIP2Q5CZC0 6907 aa3.64□□□□□ -1.83
CASC19-230ENST00000641421 A0A0A0MQY5 61 aa3.63□□□□□ -1.83
CASC19-230ENST00000641421 KRTAP9-6A8MVA2 160 aa3.63□□□□□ -1.83
CASC19-230ENST00000641421 CRCT1Q9UGL9 99 aa3.63□□□□□ -1.83
CASC19-230ENST00000641421 KRTAP19-3Q7Z4W3 81 aa3.62□□□□□ -1.83
CASC19-230ENST00000641421 SPRR2FQ96RM1 72 aa3.6□□□□□ -1.83
CASC19-230ENST00000641421 MT1GP13640 62 aa3.6□□□□□ -1.83
CASC19-230ENST00000641421 MT1MQ8N339 61 aa3.58□□□□□ -1.84
CASC19-230ENST00000641421 KRTAP4-3Q9BYR4 195 aa3.54□□□□□ -1.84
CASC19-230ENST00000641421 KRTAP5-9P26371 169 aa3.46□□□□□ -1.86
CASC19-230ENST00000641421 KRTAP2-3P0C7H8 128 aa3.44□□□□□ -1.86
CASC19-230ENST00000641421 KRTAP2-4Q9BYR9 128 aa3.44□□□□□ -1.86
CASC19-230ENST00000641421 KRTAP2-1Q9BYU5 128 aa3.44□□□□□ -1.86
CASC19-230ENST00000641421 MUC12Q9UKN1 5478 aa3.43□□□□□ -1.86
CASC19-230ENST00000641421 LCE1AQ5T7P2 110 aa3.41□□□□□ -1.86
CASC19-230ENST00000641421 MACF1Q9UPN3 7388 aaKnown RBP3.41□□□□□ -1.86
CASC19-230ENST00000641421 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.39□□□□□ -1.87
CASC19-230ENST00000641421 SPRR2EP22531 72 aa3.38□□□□□ -1.87
CASC19-230ENST00000641421 SPRR2BP35325 72 aa3.38□□□□□ -1.87
CASC19-230ENST00000641421 SPRR2AP35326 72 aa3.38□□□□□ -1.87
CASC19-230ENST00000641421 INE1O15225 51 aa3.35□□□□□ -1.87
CASC19-230ENST00000641421 KRTAP6-3Q3LI67 103 aa3.34□□□□□ -1.88
CASC19-230ENST00000641421 SPRR2DP22532 72 aa3.24□□□□□ -1.89
CASC19-230ENST00000641421 SYNE2Q8WXH0 6885 aaKnown RBP3.21□□□□□ -1.9
CASC19-230ENST00000641421 MT1AP04731 61 aa3.19□□□□□ -1.9
CASC19-230ENST00000641421 KRTAP5-5Q701N2 237 aaPredicted RBP3.19□□□□□ -1.9
CASC19-230ENST00000641421 KRTAP6-1Q3LI64 71 aa3.17□□□□□ -1.9
CASC19-230ENST00000641421 MDN1Q9NU22 5596 aa3.16□□□□□ -1.9
CASC19-230ENST00000641421 DSTQ03001 7570 aaKnown RBP3.12□□□□□ -1.91
CASC19-230ENST00000641421 KRTAP5-11Q6L8G4 156 aa3.05□□□□□ -1.92
CASC19-230ENST00000641421 KRTAP12-4P60329 112 aa2.97□□□□□ -1.93
CASC19-230ENST00000641421 KRTAP5-4Q6L8H1 288 aa2.94□□□□□ -1.94
CASC19-230ENST00000641421 SYNE1Q8NF91 8797 aaKnown RBP2.92□□□□□ -1.94
CASC19-230ENST00000641421 NEBP20929 6669 aa2.91□□□□□ -1.94
CASC19-230ENST00000641421 LCE3DQ9BYE3 92 aa2.91□□□□□ -1.94
CASC19-230ENST00000641421 MT3P25713 68 aa2.89□□□□□ -1.95
CASC19-230ENST00000641421 KRTAP6-2Q3LI66 62 aa2.89□□□□□ -1.95
CASC19-230ENST00000641421 LCE1EQ5T753 118 aa2.88□□□□□ -1.95
CASC19-230ENST00000641421 LCE3EQ5T5B0 92 aa2.86□□□□□ -1.95
CASC19-230ENST00000641421 KRTAP5-1Q6L8H4 278 aa2.84□□□□□ -1.95
CASC19-230ENST00000641421 KRTAP2-2Q9BYT5 123 aa2.83□□□□□ -1.96
CASC19-230ENST00000641421 MT4P47944 62 aa2.81□□□□□ -1.96
CASC19-230ENST00000641421 KRTAP20-1Q3LI63 56 aa2.78□□□□□ -1.97
CASC19-230ENST00000641421 KRTAP20-2Q3LI61 65 aa2.76□□□□□ -1.97
CASC19-230ENST00000641421 KRTAP4-4Q9BYR3 166 aa2.74□□□□□ -1.97
CASC19-230ENST00000641421 KRTAP5-2Q701N4 177 aa2.71□□□□□ -1.98
CASC19-230ENST00000641421 PRM1P04553 51 aa2.59□□□□□ -1.99
CASC19-230ENST00000641421 HMCN1Q96RW7 5635 aa2.57□□□□□ -2
CASC19-230ENST00000641421 OBSCNQ5VST9 7968 aa2.5□□□□□ -2.01
CASC19-230ENST00000641421 GPR98Q8WXG9 6306 aa2.47□□□□□ -2.01
CASC19-230ENST00000641421 LCE1FQ5T754 118 aa2.43□□□□□ -2.02
CASC19-230ENST00000641421 LCE1BQ5T7P3 118 aa2.33□□□□□ -2.04
CASC19-230ENST00000641421 KRTAP5-10Q6L8G5 202 aa2.3□□□□□ -2.04
CASC19-230ENST00000641421 LCE1CQ5T751 118 aa2.27□□□□□ -2.05
CASC19-230ENST00000641421 MUC5ACP98088 5654 aa2.27□□□□□ -2.05
CASC19-230ENST00000641421 KRTAP5-8O75690 187 aa2.25□□□□□ -2.05
CASC19-230ENST00000641421 KRTAP5-7Q6L8G8 165 aa2.21□□□□□ -2.06
CASC19-230ENST00000641421 AHNAK2Q8IVF2 5795 aa2.2□□□□□ -2.06
CASC19-230ENST00000641421 KRTAP21-2Q3LI59 83 aa2.06□□□□□ -2.08
CASC19-230ENST00000641421 AHNAKQ09666 5890 aaKnown RBP1.87□□□□□ -2.11
CASC19-230ENST00000641421 MUC5BQ9HC84 5762 aaPredicted RBP1.83□□□□□ -2.12
CASC19-230ENST00000641421 PHGR1C9JFL3 82 aa1.71□□□□□ -2.14
CASC19-230ENST00000641421 KRTAP21-1Q3LI58 79 aa1.61□□□□□ -2.15
CASC19-230ENST00000641421 MUC19Q7Z5P9 8384 aa1.48□□□□□ -2.17
CASC19-230ENST00000641421 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 8.5 ms