RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 KRTAP4-7Q9BYR0 210 aa5.97□□□□□ -1.45
PHGDH-208ENST00000641023 MUC12Q9UKN1 5478 aa5.96□□□□□ -1.45
PHGDH-208ENST00000641023 KRTAP19-3Q7Z4W3 81 aa5.95□□□□□ -1.46
PHGDH-208ENST00000641023 SYNE2Q8WXH0 6885 aaKnown RBP5.92□□□□□ -1.46
PHGDH-208ENST00000641023 MT1GP13640 62 aa5.92□□□□□ -1.46
PHGDH-208ENST00000641023 MT1MQ8N339 61 aa5.83□□□□□ -1.48
PHGDH-208ENST00000641023 KRTAP5-9P26371 169 aa5.83□□□□□ -1.48
PHGDH-208ENST00000641023 KRTAP9-6A8MVA2 160 aa5.82□□□□□ -1.48
PHGDH-208ENST00000641023 LCE5AQ5TCM9 118 aa5.81□□□□□ -1.48
PHGDH-208ENST00000641023 KRTAP9-6A0A140TA67 174 aa5.78□□□□□ -1.48
PHGDH-208ENST00000641023 KRTAP4-3Q9BYR4 195 aa5.75□□□□□ -1.49
PHGDH-208ENST00000641023 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.7□□□□□ -1.5
PHGDH-208ENST00000641023 MDN1Q9NU22 5596 aa5.67□□□□□ -1.5
PHGDH-208ENST00000641023 LCE1AQ5T7P2 110 aa5.67□□□□□ -1.5
PHGDH-208ENST00000641023 KRTAP6-3Q3LI67 103 aa5.63□□□□□ -1.51
PHGDH-208ENST00000641023 SPRR2EP22531 72 aa5.62□□□□□ -1.51
PHGDH-208ENST00000641023 SPRR2BP35325 72 aa5.62□□□□□ -1.51
PHGDH-208ENST00000641023 SPRR2AP35326 72 aa5.62□□□□□ -1.51
PHGDH-208ENST00000641023 INE1O15225 51 aa5.6□□□□□ -1.51
PHGDH-208ENST00000641023 DSTQ03001 7570 aaKnown RBP5.59□□□□□ -1.51
PHGDH-208ENST00000641023 LOC100996750A0A140TA64 210 aa5.59□□□□□ -1.51
PHGDH-208ENST00000641023 KRTAP2-3P0C7H8 128 aa5.47□□□□□ -1.53
PHGDH-208ENST00000641023 KRTAP2-4Q9BYR9 128 aa5.47□□□□□ -1.53
PHGDH-208ENST00000641023 KRTAP2-1Q9BYU5 128 aa5.47□□□□□ -1.53
PHGDH-208ENST00000641023 SPRR2DP22532 72 aa5.4□□□□□ -1.54
PHGDH-208ENST00000641023 KRTAP9-7A8MTY7 169 aa5.33□□□□□ -1.56
PHGDH-208ENST00000641023 KRTAP5-5Q701N2 237 aaPredicted RBP5.24□□□□□ -1.57
PHGDH-208ENST00000641023 NEBP20929 6669 aa5.21□□□□□ -1.58
PHGDH-208ENST00000641023 MT1AP04731 61 aa5.19□□□□□ -1.58
PHGDH-208ENST00000641023 LCE3BQ5TA77 95 aa5.17□□□□□ -1.58
PHGDH-208ENST00000641023 KRTAP6-1Q3LI64 71 aa5.15□□□□□ -1.59
PHGDH-208ENST00000641023 SYNE1Q8NF91 8797 aaKnown RBP5.03□□□□□ -1.6
PHGDH-208ENST00000641023 KRTAP9-4Q9BYQ2 154 aa4.93□□□□□ -1.62
PHGDH-208ENST00000641023 KRTAP5-4Q6L8H1 288 aa4.9□□□□□ -1.62
PHGDH-208ENST00000641023 KRTAP12-4P60329 112 aa4.85□□□□□ -1.63
PHGDH-208ENST00000641023 KRTAP4-9Q9BYQ8 210 aa4.83□□□□□ -1.64
PHGDH-208ENST00000641023 KRTAP2-2Q9BYT5 123 aa4.81□□□□□ -1.64
PHGDH-208ENST00000641023 LCE4AQ5TA78 99 aa4.79□□□□□ -1.64
PHGDH-208ENST00000641023 KRTAP20-1Q3LI63 56 aa4.74□□□□□ -1.65
PHGDH-208ENST00000641023 MT3P25713 68 aa4.72□□□□□ -1.65
PHGDH-208ENST00000641023 KRTAP6-2Q3LI66 62 aa4.72□□□□□ -1.65
PHGDH-208ENST00000641023 MT4P47944 62 aa4.69□□□□□ -1.66
PHGDH-208ENST00000641023 LCE3DQ9BYE3 92 aa4.68□□□□□ -1.66
PHGDH-208ENST00000641023 KRTAP4-6Q9BYQ5 205 aa4.67□□□□□ -1.66
PHGDH-208ENST00000641023 KRTAP20-2Q3LI61 65 aa4.59□□□□□ -1.67
PHGDH-208ENST00000641023 LCE3EQ5T5B0 92 aa4.57□□□□□ -1.68
PHGDH-208ENST00000641023 LCE1DQ5T752 114 aa4.56□□□□□ -1.68
PHGDH-208ENST00000641023 HMCN1Q96RW7 5635 aa4.53□□□□□ -1.68
PHGDH-208ENST00000641023 KRTAP5-2Q701N4 177 aa4.47□□□□□ -1.69
PHGDH-208ENST00000641023 OBSCNQ5VST9 7968 aa4.45□□□□□ -1.7
PHGDH-208ENST00000641023 KRTAP5-3Q6L8H2 238 aa4.4□□□□□ -1.71
PHGDH-208ENST00000641023 PRM1P04553 51 aa4.07□□□□□ -1.76
PHGDH-208ENST00000641023 LCE1EQ5T753 118 aa4.04□□□□□ -1.76
PHGDH-208ENST00000641023 KRTAP4-11Q9BYQ6 195 aa3.94□□□□□ -1.78
PHGDH-208ENST00000641023 AHNAK2Q8IVF2 5795 aa3.86□□□□□ -1.79
PHGDH-208ENST00000641023 KRTAP5-1Q6L8H4 278 aa3.85□□□□□ -1.79
PHGDH-208ENST00000641023 LCE1BQ5T7P3 118 aa3.82□□□□□ -1.8
PHGDH-208ENST00000641023 KRTAP5-10Q6L8G5 202 aa3.8□□□□□ -1.8
PHGDH-208ENST00000641023 MUC5ACP98088 5654 aa3.79□□□□□ -1.8
PHGDH-208ENST00000641023 KRTAP5-8O75690 187 aa3.77□□□□□ -1.81
PHGDH-208ENST00000641023 LCE1CQ5T751 118 aa3.77□□□□□ -1.81
PHGDH-208ENST00000641023 KRTAP4-2Q9BYR5 136 aa3.74□□□□□ -1.81
PHGDH-208ENST00000641023 KRTAP5-7Q6L8G8 165 aa3.68□□□□□ -1.82
PHGDH-208ENST00000641023 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.53□□□□□ -1.84
PHGDH-208ENST00000641023 GPR98Q8WXG9 6306 aa3.46□□□□□ -1.86
PHGDH-208ENST00000641023 KRTAP9-9Q9BYP9 154 aa3.38□□□□□ -1.87
PHGDH-208ENST00000641023 KRTAP21-2Q3LI59 83 aa3.37□□□□□ -1.87
PHGDH-208ENST00000641023 KRTAP5-11Q6L8G4 156 aa3.3□□□□□ -1.88
PHGDH-208ENST00000641023 MUC5BQ9HC84 5762 aaPredicted RBP3.26□□□□□ -1.89
PHGDH-208ENST00000641023 LCE1FQ5T754 118 aa3.11□□□□□ -1.91
PHGDH-208ENST00000641023 KRTAP4-12Q9BQ66 201 aa3.11□□□□□ -1.91
PHGDH-208ENST00000641023 KRTAP4-4Q9BYR3 166 aa3.04□□□□□ -1.92
PHGDH-208ENST00000641023 AHNAKQ09666 5890 aaKnown RBP2.85□□□□□ -1.95
PHGDH-208ENST00000641023 PHGR1C9JFL3 82 aa2.83□□□□□ -1.96
PHGDH-208ENST00000641023 MUC19Q7Z5P9 8384 aa2.64□□□□□ -1.99
PHGDH-208ENST00000641023 KRTAP21-1Q3LI58 79 aa2.51□□□□□ -2.01
PHGDH-208ENST00000641023 MUC16Q8WXI7 14507 aa1.82□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 11.6 ms