RNA–Protein interactions for RNA: ENST00000640431.1

PAX6-271, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,037 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-271ENST00000640431 KRTAP6-3Q3LI67 103 aa5.65□□□□□ -1.51
PAX6-271ENST00000640431 MDN1Q9NU22 5596 aa5.63□□□□□ -1.51
PAX6-271ENST00000640431 LCE3CQ5T5A8 94 aa5.57□□□□□ -1.52
PAX6-271ENST00000640431 SPRR2FQ96RM1 72 aa5.55□□□□□ -1.52
PAX6-271ENST00000640431 KRTAP5-9P26371 169 aa5.54□□□□□ -1.52
PAX6-271ENST00000640431 NEBP20929 6669 aa5.51□□□□□ -1.53
PAX6-271ENST00000640431 LOC100996750A0A140TA64 210 aa5.48□□□□□ -1.53
PAX6-271ENST00000640431 KRTAP4-6Q9BYQ5 205 aa5.48□□□□□ -1.53
PAX6-271ENST00000640431 KRTAP19-7Q3SYF9 63 aa5.45□□□□□ -1.54
PAX6-271ENST00000640431 INE1O15225 51 aa5.41□□□□□ -1.54
PAX6-271ENST00000640431 KRTAP9-6A8MVA2 160 aa5.39□□□□□ -1.55
PAX6-271ENST00000640431 SPRR2EP22531 72 aa5.37□□□□□ -1.55
PAX6-271ENST00000640431 SPRR2BP35325 72 aa5.37□□□□□ -1.55
PAX6-271ENST00000640431 SPRR2AP35326 72 aa5.37□□□□□ -1.55
PAX6-271ENST00000640431 LCE1AQ5T7P2 110 aa5.34□□□□□ -1.55
PAX6-271ENST00000640431 KRTAP4-7Q9BYR0 210 aa5.33□□□□□ -1.56
PAX6-271ENST00000640431 MT1EP04732 61 aa5.3□□□□□ -1.56
PAX6-271ENST00000640431 MT1LQ93083 61 aa5.3□□□□□ -1.56
PAX6-271ENST00000640431 KRTAP19-4Q3LI73 84 aa5.24□□□□□ -1.57
PAX6-271ENST00000640431 KRTAP2-3P0C7H8 128 aa5.18□□□□□ -1.58
PAX6-271ENST00000640431 KRTAP2-4Q9BYR9 128 aa5.18□□□□□ -1.58
PAX6-271ENST00000640431 KRTAP2-1Q9BYU5 128 aa5.18□□□□□ -1.58
PAX6-271ENST00000640431 SPRR2DP22532 72 aa5.17□□□□□ -1.58
PAX6-271ENST00000640431 KRTAP19-3Q7Z4W3 81 aa5.14□□□□□ -1.59
PAX6-271ENST00000640431 DSTQ03001 7570 aaKnown RBP5.13□□□□□ -1.59
PAX6-271ENST00000640431 LCE5AQ5TCM9 118 aa5.11□□□□□ -1.59
PAX6-271ENST00000640431 KRTAP20-1Q3LI63 56 aa5.11□□□□□ -1.59
PAX6-271ENST00000640431 KRTAP4-3Q9BYR4 195 aa5.02□□□□□ -1.61
PAX6-271ENST00000640431 MT1MQ8N339 61 aa5.02□□□□□ -1.61
PAX6-271ENST00000640431 MT1GP13640 62 aa5.01□□□□□ -1.61
PAX6-271ENST00000640431 LCE3BQ5TA77 95 aa5□□□□□ -1.61
PAX6-271ENST00000640431 KRTAP2-2Q9BYT5 123 aa4.89□□□□□ -1.63
PAX6-271ENST00000640431 KRTAP4-12Q9BQ66 201 aa4.86□□□□□ -1.63
PAX6-271ENST00000640431 KRTAP9-9Q9BYP9 154 aa4.72□□□□□ -1.65
PAX6-271ENST00000640431 KRTAP9-4Q9BYQ2 154 aa4.72□□□□□ -1.65
PAX6-271ENST00000640431 KRTAP4-9Q9BYQ8 210 aa4.67□□□□□ -1.66
PAX6-271ENST00000640431 HMCN1Q96RW7 5635 aa4.57□□□□□ -1.68
PAX6-271ENST00000640431 MT4P47944 62 aa4.56□□□□□ -1.68
PAX6-271ENST00000640431 KRTAP12-4P60329 112 aa4.55□□□□□ -1.68
PAX6-271ENST00000640431 KRTAP5-5Q701N2 237 aaPredicted RBP4.55□□□□□ -1.68
PAX6-271ENST00000640431 LCE1DQ5T752 114 aa4.53□□□□□ -1.68
PAX6-271ENST00000640431 KRTAP5-4Q6L8H1 288 aa4.52□□□□□ -1.69
PAX6-271ENST00000640431 LCE4AQ5TA78 99 aa4.5□□□□□ -1.69
PAX6-271ENST00000640431 SYNE1Q8NF91 8797 aaKnown RBP4.49□□□□□ -1.69
PAX6-271ENST00000640431 KRTAP6-1Q3LI64 71 aa4.49□□□□□ -1.69
PAX6-271ENST00000640431 MT1AP04731 61 aa4.44□□□□□ -1.7
PAX6-271ENST00000640431 KRTAP20-2Q3LI61 65 aa4.29□□□□□ -1.72
PAX6-271ENST00000640431 LCE3DQ9BYE3 92 aa4.27□□□□□ -1.73
PAX6-271ENST00000640431 KRTAP4-2Q9BYR5 136 aa4.27□□□□□ -1.73
PAX6-271ENST00000640431 AHNAK2Q8IVF2 5795 aa4.25□□□□□ -1.73
PAX6-271ENST00000640431 LCE3EQ5T5B0 92 aa4.22□□□□□ -1.73
PAX6-271ENST00000640431 KRTAP4-11Q9BYQ6 195 aa4.22□□□□□ -1.73
PAX6-271ENST00000640431 GPR98Q8WXG9 6306 aa4.21□□□□□ -1.74
PAX6-271ENST00000640431 KRTAP5-3Q6L8H2 238 aa4.14□□□□□ -1.75
PAX6-271ENST00000640431 KRTAP6-2Q3LI66 62 aa4.09□□□□□ -1.76
PAX6-271ENST00000640431 PRM1P04553 51 aa4.03□□□□□ -1.76
PAX6-271ENST00000640431 KRTAP5-2Q701N4 177 aa4.03□□□□□ -1.76
PAX6-271ENST00000640431 OBSCNQ5VST9 7968 aa4□□□□□ -1.77
PAX6-271ENST00000640431 KRTAP5-10Q6L8G5 202 aa3.99□□□□□ -1.77
PAX6-271ENST00000640431 MT3P25713 68 aa3.97□□□□□ -1.77
PAX6-271ENST00000640431 KRTAP5-7Q6L8G8 165 aa3.73□□□□□ -1.81
PAX6-271ENST00000640431 KRTAP5-8O75690 187 aa3.7□□□□□ -1.82
PAX6-271ENST00000640431 MUC5ACP98088 5654 aa3.61□□□□□ -1.83
PAX6-271ENST00000640431 KRTAP5-1Q6L8H4 278 aa3.58□□□□□ -1.84
PAX6-271ENST00000640431 MUC5BQ9HC84 5762 aaPredicted RBP3.48□□□□□ -1.85
PAX6-271ENST00000640431 LCE1EQ5T753 118 aa3.44□□□□□ -1.86
PAX6-271ENST00000640431 LCE1BQ5T7P3 118 aa3.38□□□□□ -1.87
PAX6-271ENST00000640431 LCE1FQ5T754 118 aa3.37□□□□□ -1.87
PAX6-271ENST00000640431 AHNAKQ09666 5890 aaKnown RBP3.36□□□□□ -1.87
PAX6-271ENST00000640431 LCE1CQ5T751 118 aa3.23□□□□□ -1.89
PAX6-271ENST00000640431 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.96□□□□□ -1.94
PAX6-271ENST00000640431 KRTAP21-2Q3LI59 83 aa2.9□□□□□ -1.94
PAX6-271ENST00000640431 KRTAP5-11Q6L8G4 156 aa2.9□□□□□ -1.95
PAX6-271ENST00000640431 KRTAP4-4Q9BYR3 166 aa2.67□□□□□ -1.98
PAX6-271ENST00000640431 KRTAP21-1Q3LI58 79 aa2.54□□□□□ -2
PAX6-271ENST00000640431 PHGR1C9JFL3 82 aa2.51□□□□□ -2.01
PAX6-271ENST00000640431 MUC19Q7Z5P9 8384 aa2.44□□□□□ -2.02
PAX6-271ENST00000640431 MUC16Q8WXI7 14507 aa1.65□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 85.8 ms