RNA–Protein interactions for RNA: ENST00000640172.1

PAX6-265, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-265ENST00000640172 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.4□□□□□ -1.71
PAX6-265ENST00000640172 MT1LQ93083 61 aa4.39□□□□□ -1.71
PAX6-265ENST00000640172 KRTAP4-3Q9BYR4 195 aa4.33□□□□□ -1.72
PAX6-265ENST00000640172 MT1EP04732 61 aa4.32□□□□□ -1.72
PAX6-265ENST00000640172 DSTQ03001 7570 aaKnown RBP4.31□□□□□ -1.72
PAX6-265ENST00000640172 KRTAP12-4P60329 112 aa4.31□□□□□ -1.72
PAX6-265ENST00000640172 CRCT1Q9UGL9 99 aa4.3□□□□□ -1.72
PAX6-265ENST00000640172 FCGBPQ9Y6R7 5405 aaPredicted RBP4.27□□□□□ -1.73
PAX6-265ENST00000640172 MUC12Q9UKN1 5478 aa4.27□□□□□ -1.73
PAX6-265ENST00000640172 FSIP2Q5CZC0 6907 aa4.25□□□□□ -1.73
PAX6-265ENST00000640172 MT1GP13640 62 aa4.24□□□□□ -1.73
PAX6-265ENST00000640172 LCE3BQ5TA77 95 aa4.23□□□□□ -1.73
PAX6-265ENST00000640172 SSPOA2VEC9 5147 aa4.18□□□□□ -1.74
PAX6-265ENST00000640172 KRTAP5-3Q6L8H2 238 aa4.17□□□□□ -1.74
PAX6-265ENST00000640172 KRTAP9-9Q9BYP9 154 aa4.17□□□□□ -1.74
PAX6-265ENST00000640172 KRTAP9-4Q9BYQ2 154 aa4.17□□□□□ -1.74
PAX6-265ENST00000640172 KRTAP4-12Q9BQ66 201 aa4.15□□□□□ -1.75
PAX6-265ENST00000640172 SYNE1Q8NF91 8797 aaKnown RBP4.14□□□□□ -1.75
PAX6-265ENST00000640172 KRTAP4-9Q9BYQ8 210 aa4.13□□□□□ -1.75
PAX6-265ENST00000640172 KRTAP19-4Q3LI73 84 aa4.11□□□□□ -1.75
PAX6-265ENST00000640172 KRTAP4-2Q9BYR5 136 aa4.03□□□□□ -1.76
PAX6-265ENST00000640172 LCE1DQ5T752 114 aa4.01□□□□□ -1.77
PAX6-265ENST00000640172 MT1MQ8N339 61 aa4.01□□□□□ -1.77
PAX6-265ENST00000640172 KRTAP9-7A8MTY7 169 aa4□□□□□ -1.77
PAX6-265ENST00000640172 OBSCNQ5VST9 7968 aa3.95□□□□□ -1.78
PAX6-265ENST00000640172 KRTAP19-3Q7Z4W3 81 aa3.92□□□□□ -1.78
PAX6-265ENST00000640172 KRTAP5-5Q701N2 237 aaPredicted RBP3.89□□□□□ -1.79
PAX6-265ENST00000640172 PRM1P04553 51 aa3.88□□□□□ -1.79
PAX6-265ENST00000640172 KRTAP19-6Q3LI70 58 aa3.85□□□□□ -1.79
PAX6-265ENST00000640172 SYNE2Q8WXH0 6885 aaKnown RBP3.82□□□□□ -1.8
PAX6-265ENST00000640172 KRTAP6-1Q3LI64 71 aa3.81□□□□□ -1.8
PAX6-265ENST00000640172 LCE3DQ9BYE3 92 aa3.8□□□□□ -1.8
PAX6-265ENST00000640172 MT1AP04731 61 aa3.78□□□□□ -1.8
PAX6-265ENST00000640172 KRTAP6-3Q3LI67 103 aa3.77□□□□□ -1.81
PAX6-265ENST00000640172 LCE3EQ5T5B0 92 aa3.76□□□□□ -1.81
PAX6-265ENST00000640172 LCE5AQ5TCM9 118 aa3.75□□□□□ -1.81
PAX6-265ENST00000640172 KRTAP4-11Q9BYQ6 195 aa3.7□□□□□ -1.82
PAX6-265ENST00000640172 MDN1Q9NU22 5596 aa3.67□□□□□ -1.82
PAX6-265ENST00000640172 LCE4AQ5TA78 99 aa3.67□□□□□ -1.82
PAX6-265ENST00000640172 SPRR2FQ96RM1 72 aa3.65□□□□□ -1.83
PAX6-265ENST00000640172 MACF1Q9UPN3 7388 aaKnown RBP3.64□□□□□ -1.83
PAX6-265ENST00000640172 KRTAP6-2Q3LI66 62 aa3.64□□□□□ -1.83
PAX6-265ENST00000640172 LCE1AQ5T7P2 110 aa3.56□□□□□ -1.84
PAX6-265ENST00000640172 NEBP20929 6669 aa3.56□□□□□ -1.84
PAX6-265ENST00000640172 KRTAP5-9P26371 169 aa3.54□□□□□ -1.84
PAX6-265ENST00000640172 KRTAP20-1Q3LI63 56 aa3.52□□□□□ -1.85
PAX6-265ENST00000640172 KRTAP2-2Q9BYT5 123 aa3.45□□□□□ -1.86
PAX6-265ENST00000640172 LCE1EQ5T753 118 aa3.31□□□□□ -1.88
PAX6-265ENST00000640172 SPRR2EP22531 72 aa3.3□□□□□ -1.88
PAX6-265ENST00000640172 SPRR2BP35325 72 aa3.3□□□□□ -1.88
PAX6-265ENST00000640172 SPRR2AP35326 72 aa3.3□□□□□ -1.88
PAX6-265ENST00000640172 SPRR2DP22532 72 aa3.2□□□□□ -1.9
PAX6-265ENST00000640172 MT3P25713 68 aa3.18□□□□□ -1.9
PAX6-265ENST00000640172 GPR98Q8WXG9 6306 aa3.14□□□□□ -1.91
PAX6-265ENST00000640172 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.03□□□□□ -1.92
PAX6-265ENST00000640172 MUC5ACP98088 5654 aa2.95□□□□□ -1.94
PAX6-265ENST00000640172 KRTAP5-4Q6L8H1 288 aa2.82□□□□□ -1.96
PAX6-265ENST00000640172 KRTAP5-10Q6L8G5 202 aa2.77□□□□□ -1.97
PAX6-265ENST00000640172 MT4P47944 62 aa2.75□□□□□ -1.97
PAX6-265ENST00000640172 HMCN1Q96RW7 5635 aa2.75□□□□□ -1.97
PAX6-265ENST00000640172 AHNAK2Q8IVF2 5795 aa2.75□□□□□ -1.97
PAX6-265ENST00000640172 KRTAP5-7Q6L8G8 165 aa2.73□□□□□ -1.97
PAX6-265ENST00000640172 LCE1FQ5T754 118 aa2.73□□□□□ -1.97
PAX6-265ENST00000640172 MUC19Q7Z5P9 8384 aa2.71□□□□□ -1.98
PAX6-265ENST00000640172 KRTAP5-2Q701N4 177 aa2.69□□□□□ -1.98
PAX6-265ENST00000640172 KRTAP20-2Q3LI61 65 aa2.67□□□□□ -1.98
PAX6-265ENST00000640172 LCE1BQ5T7P3 118 aa2.66□□□□□ -1.98
PAX6-265ENST00000640172 MUC5BQ9HC84 5762 aaPredicted RBP2.62□□□□□ -1.99
PAX6-265ENST00000640172 KRTAP5-1Q6L8H4 278 aa2.61□□□□□ -1.99
PAX6-265ENST00000640172 AHNAKQ09666 5890 aaKnown RBP2.51□□□□□ -2.01
PAX6-265ENST00000640172 KRTAP5-11Q6L8G4 156 aa2.47□□□□□ -2.01
PAX6-265ENST00000640172 KRTAP21-1Q3LI58 79 aa2.42□□□□□ -2.02
PAX6-265ENST00000640172 KRTAP21-2Q3LI59 83 aa2.42□□□□□ -2.02
PAX6-265ENST00000640172 KRTAP4-4Q9BYR3 166 aa2.4□□□□□ -2.03
PAX6-265ENST00000640172 LCE1CQ5T751 118 aa2.36□□□□□ -2.03
PAX6-265ENST00000640172 KRTAP5-8O75690 187 aa2.35□□□□□ -2.03
PAX6-265ENST00000640172 PHGR1C9JFL3 82 aa1.74□□□□□ -2.13
PAX6-265ENST00000640172 MUC16Q8WXI7 14507 aa1.3□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 62.7 ms