RNA–Protein interactions for RNA: ENST00000639715.1

SCARB2-218, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-218ENST00000639715 KRTAP9-9Q9BYP9 154 aa2.09□□□□□ -2.07
SCARB2-218ENST00000639715 KRTAP9-4Q9BYQ2 154 aa2.09□□□□□ -2.07
SCARB2-218ENST00000639715 KRTAP4-2Q9BYR5 136 aa2.08□□□□□ -2.08
SCARB2-218ENST00000639715 USH2AO75445 5202 aa2.08□□□□□ -2.08
SCARB2-218ENST00000639715 LCE3CQ5T5A8 94 aa2.08□□□□□ -2.08
SCARB2-218ENST00000639715 KRTAP19-5Q3LI72 72 aa2.07□□□□□ -2.08
SCARB2-218ENST00000639715 KRTAP4-12Q9BQ66 201 aa2.07□□□□□ -2.08
SCARB2-218ENST00000639715 KRTAP10-7P60409 375 aaPredicted RBP2.06□□□□□ -2.08
SCARB2-218ENST00000639715 KRTAP2-2Q9BYT5 123 aa2.06□□□□□ -2.08
SCARB2-218ENST00000639715 KRTAP2-1Q9BYU5 128 aa2.06□□□□□ -2.08
SCARB2-218ENST00000639715 KRTAP4-8A0A0G2JLE6 195 aa2.05□□□□□ -2.08
SCARB2-218ENST00000639715 KRTAP9-3Q9BYQ3 159 aa2.05□□□□□ -2.08
SCARB2-218ENST00000639715 KRTAP4-7Q9BYR0 210 aa2.04□□□□□ -2.08
SCARB2-218ENST00000639715 GPR98Q8WXG9 6306 aa2.03□□□□□ -2.08
SCARB2-218ENST00000639715 KRTAP5-7Q6L8G8 165 aa2.03□□□□□ -2.08
SCARB2-218ENST00000639715 KRTAP12-4P60329 112 aa2.02□□□□□ -2.09
SCARB2-218ENST00000639715 SPRR2FQ96RM1 72 aa1.99□□□□□ -2.09
SCARB2-218ENST00000639715 MUC5BQ9HC84 5762 aaPredicted RBP1.99□□□□□ -2.09
SCARB2-218ENST00000639715 FCGBPQ9Y6R7 5405 aaPredicted RBP1.98□□□□□ -2.09
SCARB2-218ENST00000639715 SYNE1Q8NF91 8797 aaKnown RBP1.96□□□□□ -2.1
SCARB2-218ENST00000639715 KRTAP4-9Q9BYQ8 210 aa1.91□□□□□ -2.1
SCARB2-218ENST00000639715 KRTAP5-10Q6L8G5 202 aa1.91□□□□□ -2.1
SCARB2-218ENST00000639715 AHNAKQ09666 5890 aaKnown RBP1.91□□□□□ -2.1
SCARB2-218ENST00000639715 SPRR2EP22531 72 aa1.9□□□□□ -2.1
SCARB2-218ENST00000639715 SPRR2BP35325 72 aa1.9□□□□□ -2.1
SCARB2-218ENST00000639715 SPRR2AP35326 72 aa1.9□□□□□ -2.1
SCARB2-218ENST00000639715 LCE1AQ5T7P2 110 aa1.89□□□□□ -2.11
SCARB2-218ENST00000639715 MACF1Q9UPN3 7388 aaKnown RBP1.89□□□□□ -2.11
SCARB2-218ENST00000639715 MT1GP13640 62 aa1.87□□□□□ -2.11
SCARB2-218ENST00000639715 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.87□□□□□ -2.11
SCARB2-218ENST00000639715 MT1LQ93083 61 aa1.87□□□□□ -2.11
SCARB2-218ENST00000639715 FSIP2Q5CZC0 6907 aa1.86□□□□□ -2.11
SCARB2-218ENST00000639715 MT1EP04732 61 aa1.86□□□□□ -2.11
SCARB2-218ENST00000639715 SPRR2DP22532 72 aa1.85□□□□□ -2.11
SCARB2-218ENST00000639715 KRTAP9-6A8MVA2 160 aa1.85□□□□□ -2.11
SCARB2-218ENST00000639715 LCE4AQ5TA78 99 aa1.84□□□□□ -2.12
SCARB2-218ENST00000639715 KMT2DO14686 5537 aa1.83□□□□□ -2.12
SCARB2-218ENST00000639715 KRTAP19-7Q3SYF9 63 aa1.82□□□□□ -2.12
SCARB2-218ENST00000639715 KRTAP19-3Q7Z4W3 81 aa1.82□□□□□ -2.12
SCARB2-218ENST00000639715 AHNAK2Q8IVF2 5795 aa1.81□□□□□ -2.12
SCARB2-218ENST00000639715 SYNE2Q8WXH0 6885 aaKnown RBP1.8□□□□□ -2.12
SCARB2-218ENST00000639715 PRM1P04553 51 aa1.8□□□□□ -2.12
SCARB2-218ENST00000639715 LCE5AQ5TCM9 118 aa1.77□□□□□ -2.13
SCARB2-218ENST00000639715 MT1MQ8N339 61 aa1.77□□□□□ -2.13
SCARB2-218ENST00000639715 OBSCNQ5VST9 7968 aa1.77□□□□□ -2.13
SCARB2-218ENST00000639715 LCE3BQ5TA77 95 aa1.77□□□□□ -2.13
SCARB2-218ENST00000639715 LCE3EQ5T5B0 92 aa1.75□□□□□ -2.13
SCARB2-218ENST00000639715 LCE3DQ9BYE3 92 aa1.75□□□□□ -2.13
SCARB2-218ENST00000639715 KRTAP4-11Q9BYQ6 195 aa1.73□□□□□ -2.13
SCARB2-218ENST00000639715 LCE1DQ5T752 114 aa1.7□□□□□ -2.14
SCARB2-218ENST00000639715 KRTAP4-3Q9BYR4 195 aa1.69□□□□□ -2.14
SCARB2-218ENST00000639715 LCE1EQ5T753 118 aa1.68□□□□□ -2.14
SCARB2-218ENST00000639715 HMCN1Q96RW7 5635 aa1.66□□□□□ -2.14
SCARB2-218ENST00000639715 MDN1Q9NU22 5596 aa1.65□□□□□ -2.15
SCARB2-218ENST00000639715 MT4P47944 62 aa1.65□□□□□ -2.15
SCARB2-218ENST00000639715 DSTQ03001 7570 aaKnown RBP1.65□□□□□ -2.15
SCARB2-218ENST00000639715 MT1AP04731 61 aa1.64□□□□□ -2.15
SCARB2-218ENST00000639715 KRTAP5-4Q6L8H1 288 aa1.63□□□□□ -2.15
SCARB2-218ENST00000639715 KRTAP5-2Q701N4 177 aa1.62□□□□□ -2.15
SCARB2-218ENST00000639715 MUC12Q9UKN1 5478 aa1.61□□□□□ -2.15
SCARB2-218ENST00000639715 MT3P25713 68 aa1.6□□□□□ -2.15
SCARB2-218ENST00000639715 KRTAP6-2Q3LI66 62 aa1.57□□□□□ -2.16
SCARB2-218ENST00000639715 MUC5ACP98088 5654 aa1.57□□□□□ -2.16
SCARB2-218ENST00000639715 KRTAP6-1Q3LI64 71 aa1.56□□□□□ -2.16
SCARB2-218ENST00000639715 MUC19Q7Z5P9 8384 aa1.54□□□□□ -2.16
SCARB2-218ENST00000639715 LCE1BQ5T7P3 118 aa1.53□□□□□ -2.16
SCARB2-218ENST00000639715 KRTAP5-5Q701N2 237 aaPredicted RBP1.51□□□□□ -2.17
SCARB2-218ENST00000639715 LCE1FQ5T754 118 aa1.5□□□□□ -2.17
SCARB2-218ENST00000639715 LCE1CQ5T751 118 aa1.43□□□□□ -2.18
SCARB2-218ENST00000639715 KRTAP5-8O75690 187 aa1.43□□□□□ -2.18
SCARB2-218ENST00000639715 KRTAP20-2Q3LI61 65 aa1.38□□□□□ -2.19
SCARB2-218ENST00000639715 KRTAP5-1Q6L8H4 278 aa1.34□□□□□ -2.19
SCARB2-218ENST00000639715 KRTAP5-11Q6L8G4 156 aa1.3□□□□□ -2.2
SCARB2-218ENST00000639715 KRTAP4-4Q9BYR3 166 aa1.3□□□□□ -2.2
SCARB2-218ENST00000639715 KRTAP21-1Q3LI58 79 aa0.99□□□□□ -2.25
SCARB2-218ENST00000639715 PHGR1C9JFL3 82 aa0.97□□□□□ -2.25
SCARB2-218ENST00000639715 KRTAP21-2Q3LI59 83 aa0.92□□□□□ -2.26
SCARB2-218ENST00000639715 MUC16Q8WXI7 14507 aa0.67□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 106.6 ms