RNA–Protein interactions for RNA: ENST00000639277.1

GFAP-233, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5 BASIC

Gene GFAP, Length 1,783 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-233ENST00000639277 A0A0A0MQY5 61 aa6.05□□□□□ -1.44
GFAP-233ENST00000639277 NEBP20929 6669 aa6.04□□□□□ -1.44
GFAP-233ENST00000639277 LCE3CQ5T5A8 94 aa5.99□□□□□ -1.45
GFAP-233ENST00000639277 KRTAP19-7Q3SYF9 63 aa5.97□□□□□ -1.45
GFAP-233ENST00000639277 KRTAP5-9P26371 169 aa5.93□□□□□ -1.46
GFAP-233ENST00000639277 KRTAP19-4Q3LI73 84 aa5.88□□□□□ -1.47
GFAP-233ENST00000639277 MT1EP04732 61 aa5.84□□□□□ -1.47
GFAP-233ENST00000639277 MT1LQ93083 61 aa5.78□□□□□ -1.48
GFAP-233ENST00000639277 SPRR2FQ96RM1 72 aa5.77□□□□□ -1.49
GFAP-233ENST00000639277 KRTAP9-6A8MVA2 160 aa5.69□□□□□ -1.5
GFAP-233ENST00000639277 KRTAP4-7Q9BYR0 210 aa5.68□□□□□ -1.5
GFAP-233ENST00000639277 SPRR2EP22531 72 aa5.65□□□□□ -1.51
GFAP-233ENST00000639277 SPRR2BP35325 72 aa5.65□□□□□ -1.51
GFAP-233ENST00000639277 SPRR2AP35326 72 aa5.65□□□□□ -1.51
GFAP-233ENST00000639277 LCE1AQ5T7P2 110 aa5.65□□□□□ -1.51
GFAP-233ENST00000639277 KRTAP20-1Q3LI63 56 aa5.62□□□□□ -1.51
GFAP-233ENST00000639277 INE1O15225 51 aa5.56□□□□□ -1.52
GFAP-233ENST00000639277 KRTAP19-3Q7Z4W3 81 aa5.55□□□□□ -1.52
GFAP-233ENST00000639277 MT1GP13640 62 aa5.52□□□□□ -1.53
GFAP-233ENST00000639277 KRTAP2-3P0C7H8 128 aa5.49□□□□□ -1.53
GFAP-233ENST00000639277 KRTAP2-4Q9BYR9 128 aa5.49□□□□□ -1.53
GFAP-233ENST00000639277 MT1MQ8N339 61 aa5.48□□□□□ -1.53
GFAP-233ENST00000639277 KRTAP2-1Q9BYU5 128 aa5.47□□□□□ -1.53
GFAP-233ENST00000639277 SPRR2DP22532 72 aa5.44□□□□□ -1.54
GFAP-233ENST00000639277 LCE5AQ5TCM9 118 aa5.43□□□□□ -1.54
GFAP-233ENST00000639277 DSTQ03001 7570 aaKnown RBP5.4□□□□□ -1.54
GFAP-233ENST00000639277 KRTAP4-3Q9BYR4 195 aa5.39□□□□□ -1.55
GFAP-233ENST00000639277 KRTAP2-2Q9BYT5 123 aa5.32□□□□□ -1.56
GFAP-233ENST00000639277 LOC100996750A0A140TA64 210 aa5.31□□□□□ -1.56
GFAP-233ENST00000639277 LCE3BQ5TA77 95 aa5.3□□□□□ -1.56
GFAP-233ENST00000639277 KRTAP4-9Q9BYQ8 210 aa5.01□□□□□ -1.61
GFAP-233ENST00000639277 KRTAP5-5Q701N2 237 aaPredicted RBP4.93□□□□□ -1.62
GFAP-233ENST00000639277 HMCN1Q96RW7 5635 aa4.92□□□□□ -1.62
GFAP-233ENST00000639277 MT1AP04731 61 aa4.9□□□□□ -1.63
GFAP-233ENST00000639277 KRTAP6-1Q3LI64 71 aa4.87□□□□□ -1.63
GFAP-233ENST00000639277 LCE1DQ5T752 114 aa4.86□□□□□ -1.63
GFAP-233ENST00000639277 MT4P47944 62 aa4.81□□□□□ -1.64
GFAP-233ENST00000639277 KRTAP5-4Q6L8H1 288 aa4.8□□□□□ -1.64
GFAP-233ENST00000639277 GPR98Q8WXG9 6306 aa4.79□□□□□ -1.64
GFAP-233ENST00000639277 LCE4AQ5TA78 99 aa4.76□□□□□ -1.65
GFAP-233ENST00000639277 KRTAP4-6Q9BYQ5 205 aa4.75□□□□□ -1.65
GFAP-233ENST00000639277 KRTAP12-4P60329 112 aa4.74□□□□□ -1.65
GFAP-233ENST00000639277 AHNAK2Q8IVF2 5795 aa4.67□□□□□ -1.66
GFAP-233ENST00000639277 SYNE1Q8NF91 8797 aaKnown RBP4.63□□□□□ -1.67
GFAP-233ENST00000639277 KRTAP9-4Q9BYQ2 154 aa4.63□□□□□ -1.67
GFAP-233ENST00000639277 LCE3DQ9BYE3 92 aa4.58□□□□□ -1.68
GFAP-233ENST00000639277 KRTAP20-2Q3LI61 65 aa4.52□□□□□ -1.69
GFAP-233ENST00000639277 KRTAP4-12Q9BQ66 201 aa4.52□□□□□ -1.69
GFAP-233ENST00000639277 LCE3EQ5T5B0 92 aa4.5□□□□□ -1.69
GFAP-233ENST00000639277 KRTAP5-10Q6L8G5 202 aa4.47□□□□□ -1.69
GFAP-233ENST00000639277 MT3P25713 68 aa4.42□□□□□ -1.7
GFAP-233ENST00000639277 KRTAP6-2Q3LI66 62 aa4.41□□□□□ -1.7
GFAP-233ENST00000639277 KRTAP5-3Q6L8H2 238 aa4.41□□□□□ -1.7
GFAP-233ENST00000639277 KRTAP9-9Q9BYP9 154 aa4.3□□□□□ -1.72
GFAP-233ENST00000639277 KRTAP5-2Q701N4 177 aa4.23□□□□□ -1.73
GFAP-233ENST00000639277 OBSCNQ5VST9 7968 aa4.23□□□□□ -1.73
GFAP-233ENST00000639277 KRTAP5-7Q6L8G8 165 aa4.22□□□□□ -1.73
GFAP-233ENST00000639277 PRM1P04553 51 aa4.17□□□□□ -1.74
GFAP-233ENST00000639277 KRTAP4-11Q9BYQ6 195 aa4.09□□□□□ -1.75
GFAP-233ENST00000639277 KRTAP5-8O75690 187 aa3.99□□□□□ -1.77
GFAP-233ENST00000639277 MUC5BQ9HC84 5762 aaPredicted RBP3.87□□□□□ -1.79
GFAP-233ENST00000639277 KRTAP5-1Q6L8H4 278 aa3.81□□□□□ -1.8
GFAP-233ENST00000639277 MUC5ACP98088 5654 aa3.81□□□□□ -1.8
GFAP-233ENST00000639277 LCE1EQ5T753 118 aa3.77□□□□□ -1.81
GFAP-233ENST00000639277 AHNAKQ09666 5890 aaKnown RBP3.75□□□□□ -1.81
GFAP-233ENST00000639277 KRTAP4-2Q9BYR5 136 aa3.72□□□□□ -1.81
GFAP-233ENST00000639277 LCE1CQ5T751 118 aa3.53□□□□□ -1.84
GFAP-233ENST00000639277 LCE1BQ5T7P3 118 aa3.53□□□□□ -1.84
GFAP-233ENST00000639277 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.34□□□□□ -1.87
GFAP-233ENST00000639277 KRTAP21-2Q3LI59 83 aa3.18□□□□□ -1.9
GFAP-233ENST00000639277 LCE1FQ5T754 118 aa3.17□□□□□ -1.9
GFAP-233ENST00000639277 KRTAP5-11Q6L8G4 156 aa3.09□□□□□ -1.91
GFAP-233ENST00000639277 KRTAP4-4Q9BYR3 166 aa2.81□□□□□ -1.96
GFAP-233ENST00000639277 PHGR1C9JFL3 82 aa2.64□□□□□ -1.99
GFAP-233ENST00000639277 KRTAP21-1Q3LI58 79 aa2.62□□□□□ -1.99
GFAP-233ENST00000639277 MUC19Q7Z5P9 8384 aa2.58□□□□□ -2
GFAP-233ENST00000639277 MUC16Q8WXI7 14507 aa1.79□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 346.5 ms