RNA–Protein interactions for RNA: ENST00000639167.1

NECAP1-216, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5 BASIC

Gene NECAP1, Length 2,197 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-216ENST00000639167 USH2AO75445 5202 aa4.08□□□□□ -1.76
NECAP1-216ENST00000639167 KMT2DO14686 5537 aa4□□□□□ -1.77
NECAP1-216ENST00000639167 KRTAP19-5Q3LI72 72 aa3.98□□□□□ -1.77
NECAP1-216ENST00000639167 LCE5AQ5TCM9 118 aa3.9□□□□□ -1.78
NECAP1-216ENST00000639167 LCE3CQ5T5A8 94 aa3.86□□□□□ -1.79
NECAP1-216ENST00000639167 KRTAP19-7Q3SYF9 63 aa3.81□□□□□ -1.8
NECAP1-216ENST00000639167 SSPOA2VEC9 5147 aa3.81□□□□□ -1.8
NECAP1-216ENST00000639167 LCE4AQ5TA78 99 aa3.79□□□□□ -1.8
NECAP1-216ENST00000639167 KRTAP9-6A8MVA2 160 aa3.74□□□□□ -1.81
NECAP1-216ENST00000639167 KRTAP2-2Q9BYT5 123 aa3.73□□□□□ -1.81
NECAP1-216ENST00000639167 FSIP2Q5CZC0 6907 aa3.71□□□□□ -1.82
NECAP1-216ENST00000639167 MT1EP04732 61 aa3.7□□□□□ -1.82
NECAP1-216ENST00000639167 KRTAP19-6Q3LI70 58 aa3.7□□□□□ -1.82
NECAP1-216ENST00000639167 MT1LQ93083 61 aa3.69□□□□□ -1.82
NECAP1-216ENST00000639167 KRTAP19-4Q3LI73 84 aa3.58□□□□□ -1.84
NECAP1-216ENST00000639167 FCGBPQ9Y6R7 5405 aaPredicted RBP3.57□□□□□ -1.84
NECAP1-216ENST00000639167 KRTAP9-7A8MTY7 169 aa3.56□□□□□ -1.84
NECAP1-216ENST00000639167 KRTAP4-3Q9BYR4 195 aa3.55□□□□□ -1.84
NECAP1-216ENST00000639167 KRTAP2-3P0C7H8 128 aa3.54□□□□□ -1.84
NECAP1-216ENST00000639167 KRTAP2-4Q9BYR9 128 aa3.54□□□□□ -1.84
NECAP1-216ENST00000639167 KRTAP2-1Q9BYU5 128 aa3.54□□□□□ -1.84
NECAP1-216ENST00000639167 MUC12Q9UKN1 5478 aa3.53□□□□□ -1.84
NECAP1-216ENST00000639167 MT1GP13640 62 aa3.47□□□□□ -1.85
NECAP1-216ENST00000639167 KRTAP19-3Q7Z4W3 81 aa3.47□□□□□ -1.85
NECAP1-216ENST00000639167 MT1MQ8N339 61 aa3.47□□□□□ -1.85
NECAP1-216ENST00000639167 CRCT1Q9UGL9 99 aa3.43□□□□□ -1.86
NECAP1-216ENST00000639167 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.41□□□□□ -1.86
NECAP1-216ENST00000639167 SPRR2FQ96RM1 72 aa3.41□□□□□ -1.86
NECAP1-216ENST00000639167 MACF1Q9UPN3 7388 aaKnown RBP3.37□□□□□ -1.87
NECAP1-216ENST00000639167 DSTQ03001 7570 aaKnown RBP3.34□□□□□ -1.87
NECAP1-216ENST00000639167 LCE1FQ5T754 118 aa3.34□□□□□ -1.87
NECAP1-216ENST00000639167 LCE1AQ5T7P2 110 aa3.29□□□□□ -1.88
NECAP1-216ENST00000639167 SYNE2Q8WXH0 6885 aaKnown RBP3.27□□□□□ -1.89
NECAP1-216ENST00000639167 KRTAP6-3Q3LI67 103 aa3.24□□□□□ -1.89
NECAP1-216ENST00000639167 MT3P25713 68 aa3.22□□□□□ -1.89
NECAP1-216ENST00000639167 MDN1Q9NU22 5596 aa3.22□□□□□ -1.89
NECAP1-216ENST00000639167 LCE1EQ5T753 118 aa3.18□□□□□ -1.9
NECAP1-216ENST00000639167 KRTAP6-1Q3LI64 71 aa3.15□□□□□ -1.91
NECAP1-216ENST00000639167 KRTAP5-9P26371 169 aa3.14□□□□□ -1.91
NECAP1-216ENST00000639167 KRTAP12-4P60329 112 aa3.14□□□□□ -1.91
NECAP1-216ENST00000639167 SPRR2EP22531 72 aa3.11□□□□□ -1.91
NECAP1-216ENST00000639167 SPRR2BP35325 72 aa3.11□□□□□ -1.91
NECAP1-216ENST00000639167 SPRR2AP35326 72 aa3.11□□□□□ -1.91
NECAP1-216ENST00000639167 MT1AP04731 61 aa3.1□□□□□ -1.91
NECAP1-216ENST00000639167 SYNE1Q8NF91 8797 aaKnown RBP3.1□□□□□ -1.91
NECAP1-216ENST00000639167 KRTAP5-5Q701N2 237 aaPredicted RBP3.05□□□□□ -1.92
NECAP1-216ENST00000639167 SPRR2DP22532 72 aa2.98□□□□□ -1.93
NECAP1-216ENST00000639167 LCE3DQ9BYE3 92 aa2.96□□□□□ -1.94
NECAP1-216ENST00000639167 KRTAP5-11Q6L8G4 156 aa2.95□□□□□ -1.94
NECAP1-216ENST00000639167 GPR98Q8WXG9 6306 aa2.92□□□□□ -1.94
NECAP1-216ENST00000639167 LCE3EQ5T5B0 92 aa2.92□□□□□ -1.94
NECAP1-216ENST00000639167 KRTAP5-4Q6L8H1 288 aa2.9□□□□□ -1.94
NECAP1-216ENST00000639167 HMCN1Q96RW7 5635 aa2.86□□□□□ -1.95
NECAP1-216ENST00000639167 KRTAP5-1Q6L8H4 278 aa2.84□□□□□ -1.95
NECAP1-216ENST00000639167 KRTAP6-2Q3LI66 62 aa2.83□□□□□ -1.96
NECAP1-216ENST00000639167 KRTAP4-4Q9BYR3 166 aa2.81□□□□□ -1.96
NECAP1-216ENST00000639167 PRM1P04553 51 aa2.78□□□□□ -1.96
NECAP1-216ENST00000639167 OBSCNQ5VST9 7968 aa2.77□□□□□ -1.97
NECAP1-216ENST00000639167 NEBP20929 6669 aa2.73□□□□□ -1.97
NECAP1-216ENST00000639167 MT4P47944 62 aa2.65□□□□□ -1.99
NECAP1-216ENST00000639167 MUC5BQ9HC84 5762 aaPredicted RBP2.61□□□□□ -1.99
NECAP1-216ENST00000639167 KRTAP20-2Q3LI61 65 aa2.57□□□□□ -2
NECAP1-216ENST00000639167 KRTAP5-2Q701N4 177 aa2.54□□□□□ -2
NECAP1-216ENST00000639167 KRTAP20-1Q3LI63 56 aa2.42□□□□□ -2.02
NECAP1-216ENST00000639167 AHNAKQ09666 5890 aaKnown RBP2.42□□□□□ -2.02
NECAP1-216ENST00000639167 MUC5ACP98088 5654 aa2.36□□□□□ -2.03
NECAP1-216ENST00000639167 LCE1BQ5T7P3 118 aa2.3□□□□□ -2.04
NECAP1-216ENST00000639167 KRTAP5-8O75690 187 aa2.26□□□□□ -2.05
NECAP1-216ENST00000639167 KRTAP5-10Q6L8G5 202 aa2.17□□□□□ -2.06
NECAP1-216ENST00000639167 LCE1CQ5T751 118 aa2.14□□□□□ -2.07
NECAP1-216ENST00000639167 AHNAK2Q8IVF2 5795 aa2.05□□□□□ -2.08
NECAP1-216ENST00000639167 KRTAP21-2Q3LI59 83 aa2.02□□□□□ -2.09
NECAP1-216ENST00000639167 KRTAP5-7Q6L8G8 165 aa1.96□□□□□ -2.1
NECAP1-216ENST00000639167 KRTAP21-1Q3LI58 79 aa1.79□□□□□ -2.12
NECAP1-216ENST00000639167 MUC19Q7Z5P9 8384 aa1.74□□□□□ -2.13
NECAP1-216ENST00000639167 PHGR1C9JFL3 82 aa1.6□□□□□ -2.15
NECAP1-216ENST00000639167 MUC16Q8WXI7 14507 aa1.05□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 84.8 ms