RNA–Protein interactions for RNA: ENST00000639083.1

TARDBP-230, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TARDBP, Length 2,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-230ENST00000639083 FCGBPQ9Y6R7 5405 aaPredicted RBP3.98□□□□□ -1.77
TARDBP-230ENST00000639083 LUZP6Q538Z0 58 aa3.97□□□□□ -1.77
TARDBP-230ENST00000639083 KRTAP19-7Q3SYF9 63 aa3.95□□□□□ -1.78
TARDBP-230ENST00000639083 KRTAP4-9Q9BYQ8 210 aa3.95□□□□□ -1.78
TARDBP-230ENST00000639083 KRTAP4-2Q9BYR5 136 aa3.95□□□□□ -1.78
TARDBP-230ENST00000639083 MT1EP04732 61 aa3.86□□□□□ -1.79
TARDBP-230ENST00000639083 LCE3CQ5T5A8 94 aa3.86□□□□□ -1.79
TARDBP-230ENST00000639083 MT1LQ93083 61 aa3.81□□□□□ -1.8
TARDBP-230ENST00000639083 MUC12Q9UKN1 5478 aa3.78□□□□□ -1.8
TARDBP-230ENST00000639083 KRTAP4-11Q9BYQ6 195 aa3.78□□□□□ -1.8
TARDBP-230ENST00000639083 MACF1Q9UPN3 7388 aaKnown RBP3.76□□□□□ -1.81
TARDBP-230ENST00000639083 CRCT1Q9UGL9 99 aa3.75□□□□□ -1.81
TARDBP-230ENST00000639083 LCE4AQ5TA78 99 aa3.74□□□□□ -1.81
TARDBP-230ENST00000639083 KRTAP19-4Q3LI73 84 aa3.73□□□□□ -1.81
TARDBP-230ENST00000639083 KRTAP5-3Q6L8H2 238 aa3.73□□□□□ -1.81
TARDBP-230ENST00000639083 KRTAP9-6A8MVA2 160 aa3.69□□□□□ -1.82
TARDBP-230ENST00000639083 SPRR2FQ96RM1 72 aa3.69□□□□□ -1.82
TARDBP-230ENST00000639083 SYNE2Q8WXH0 6885 aaKnown RBP3.68□□□□□ -1.82
TARDBP-230ENST00000639083 KRTAP19-3Q7Z4W3 81 aa3.67□□□□□ -1.82
TARDBP-230ENST00000639083 MT1GP13640 62 aa3.64□□□□□ -1.83
TARDBP-230ENST00000639083 KRTAP4-3Q9BYR4 195 aa3.63□□□□□ -1.83
TARDBP-230ENST00000639083 MT1MQ8N339 61 aa3.62□□□□□ -1.83
TARDBP-230ENST00000639083 MDN1Q9NU22 5596 aa3.61□□□□□ -1.83
TARDBP-230ENST00000639083 LCE5AQ5TCM9 118 aa3.59□□□□□ -1.83
TARDBP-230ENST00000639083 KRTAP9-7A8MTY7 169 aa3.57□□□□□ -1.84
TARDBP-230ENST00000639083 DSTQ03001 7570 aaKnown RBP3.55□□□□□ -1.84
TARDBP-230ENST00000639083 KRTAP5-9P26371 169 aa3.55□□□□□ -1.84
TARDBP-230ENST00000639083 LCE1AQ5T7P2 110 aa3.5□□□□□ -1.85
TARDBP-230ENST00000639083 INE1O15225 51 aa3.48□□□□□ -1.85
TARDBP-230ENST00000639083 SPRR2EP22531 72 aa3.45□□□□□ -1.86
TARDBP-230ENST00000639083 SPRR2BP35325 72 aa3.45□□□□□ -1.86
TARDBP-230ENST00000639083 SPRR2AP35326 72 aa3.45□□□□□ -1.86
TARDBP-230ENST00000639083 KRTAP2-3P0C7H8 128 aa3.44□□□□□ -1.86
TARDBP-230ENST00000639083 KRTAP2-4Q9BYR9 128 aa3.44□□□□□ -1.86
TARDBP-230ENST00000639083 KRTAP2-1Q9BYU5 128 aa3.44□□□□□ -1.86
TARDBP-230ENST00000639083 KRTAP6-3Q3LI67 103 aa3.41□□□□□ -1.86
TARDBP-230ENST00000639083 SPRR2DP22532 72 aa3.31□□□□□ -1.88
TARDBP-230ENST00000639083 KRTAP5-5Q701N2 237 aaPredicted RBP3.24□□□□□ -1.89
TARDBP-230ENST00000639083 KRTAP6-1Q3LI64 71 aa3.23□□□□□ -1.89
TARDBP-230ENST00000639083 MT1AP04731 61 aa3.21□□□□□ -1.9
TARDBP-230ENST00000639083 NEBP20929 6669 aa3.18□□□□□ -1.9
TARDBP-230ENST00000639083 SYNE1Q8NF91 8797 aaKnown RBP3.16□□□□□ -1.9
TARDBP-230ENST00000639083 KRTAP5-4Q6L8H1 288 aa3□□□□□ -1.93
TARDBP-230ENST00000639083 KRTAP12-4P60329 112 aa2.99□□□□□ -1.93
TARDBP-230ENST00000639083 KRTAP6-2Q3LI66 62 aa2.95□□□□□ -1.94
TARDBP-230ENST00000639083 LCE3DQ9BYE3 92 aa2.93□□□□□ -1.94
TARDBP-230ENST00000639083 MT4P47944 62 aa2.91□□□□□ -1.94
TARDBP-230ENST00000639083 KRTAP2-2Q9BYT5 123 aa2.91□□□□□ -1.94
TARDBP-230ENST00000639083 MT3P25713 68 aa2.9□□□□□ -1.94
TARDBP-230ENST00000639083 KRTAP20-1Q3LI63 56 aa2.9□□□□□ -1.95
TARDBP-230ENST00000639083 OBSCNQ5VST9 7968 aa2.88□□□□□ -1.95
TARDBP-230ENST00000639083 LCE3EQ5T5B0 92 aa2.85□□□□□ -1.95
TARDBP-230ENST00000639083 HMCN1Q96RW7 5635 aa2.83□□□□□ -1.96
TARDBP-230ENST00000639083 KRTAP20-2Q3LI61 65 aa2.82□□□□□ -1.96
TARDBP-230ENST00000639083 KRTAP5-2Q701N4 177 aa2.75□□□□□ -1.97
TARDBP-230ENST00000639083 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.69□□□□□ -1.98
TARDBP-230ENST00000639083 PRM1P04553 51 aa2.63□□□□□ -1.99
TARDBP-230ENST00000639083 LCE1FQ5T754 118 aa2.62□□□□□ -1.99
TARDBP-230ENST00000639083 KRTAP5-11Q6L8G4 156 aa2.58□□□□□ -2
TARDBP-230ENST00000639083 GPR98Q8WXG9 6306 aa2.56□□□□□ -2
TARDBP-230ENST00000639083 LCE1EQ5T753 118 aa2.46□□□□□ -2.02
TARDBP-230ENST00000639083 MUC5ACP98088 5654 aa2.42□□□□□ -2.02
TARDBP-230ENST00000639083 AHNAK2Q8IVF2 5795 aa2.41□□□□□ -2.02
TARDBP-230ENST00000639083 LCE1BQ5T7P3 118 aa2.39□□□□□ -2.03
TARDBP-230ENST00000639083 KRTAP5-1Q6L8H4 278 aa2.38□□□□□ -2.03
TARDBP-230ENST00000639083 KRTAP5-10Q6L8G5 202 aa2.33□□□□□ -2.04
TARDBP-230ENST00000639083 KRTAP5-8O75690 187 aa2.31□□□□□ -2.04
TARDBP-230ENST00000639083 LCE1CQ5T751 118 aa2.31□□□□□ -2.04
TARDBP-230ENST00000639083 KRTAP4-4Q9BYR3 166 aa2.28□□□□□ -2.05
TARDBP-230ENST00000639083 KRTAP5-7Q6L8G8 165 aa2.23□□□□□ -2.05
TARDBP-230ENST00000639083 KRTAP21-2Q3LI59 83 aa2.1□□□□□ -2.07
TARDBP-230ENST00000639083 MUC5BQ9HC84 5762 aaPredicted RBP2.09□□□□□ -2.07
TARDBP-230ENST00000639083 AHNAKQ09666 5890 aaKnown RBP2.06□□□□□ -2.08
TARDBP-230ENST00000639083 PHGR1C9JFL3 82 aa1.74□□□□□ -2.13
TARDBP-230ENST00000639083 MUC19Q7Z5P9 8384 aa1.74□□□□□ -2.13
TARDBP-230ENST00000639083 KRTAP21-1Q3LI58 79 aa1.59□□□□□ -2.15
TARDBP-230ENST00000639083 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 9.5 ms