RNA–Protein interactions for RNA: ENST00000638963.1

PAX6-246, Transcript of paired box 6, humanhuman

TSL 5 BASIC

Gene PAX6, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-246ENST00000638963 LCE1DQ5T752 114 aa3.86□□□□□ -1.79
PAX6-246ENST00000638963 MACF1Q9UPN3 7388 aaKnown RBP3.86□□□□□ -1.79
PAX6-246ENST00000638963 KRTAP4-2Q9BYR5 136 aa3.8□□□□□ -1.8
PAX6-246ENST00000638963 KMT2DO14686 5537 aa3.79□□□□□ -1.8
PAX6-246ENST00000638963 KRTAP10-12P60413 245 aa3.79□□□□□ -1.8
PAX6-246ENST00000638963 SYNE2Q8WXH0 6885 aaKnown RBP3.78□□□□□ -1.8
PAX6-246ENST00000638963 LCE5AQ5TCM9 118 aa3.74□□□□□ -1.81
PAX6-246ENST00000638963 KRTAP4-9Q9BYQ8 210 aa3.73□□□□□ -1.81
PAX6-246ENST00000638963 TNP1P09430 55 aa3.72□□□□□ -1.81
PAX6-246ENST00000638963 KRTAP8-1Q8IUC2 63 aa3.71□□□□□ -1.82
PAX6-246ENST00000638963 KRTAP6-3Q3LI67 103 aa3.69□□□□□ -1.82
PAX6-246ENST00000638963 LCE3AQ5TA76 89 aa3.66□□□□□ -1.82
PAX6-246ENST00000638963 KRTAP4-11Q9BYQ6 195 aa3.64□□□□□ -1.83
PAX6-246ENST00000638963 KRTAP5-9P26371 169 aa3.63□□□□□ -1.83
PAX6-246ENST00000638963 SPRR2FQ96RM1 72 aa3.63□□□□□ -1.83
PAX6-246ENST00000638963 KRTAP19-5Q3LI72 72 aa3.59□□□□□ -1.83
PAX6-246ENST00000638963 KRTAP19-7Q3SYF9 63 aa3.59□□□□□ -1.83
PAX6-246ENST00000638963 MUC12Q9UKN1 5478 aa3.58□□□□□ -1.84
PAX6-246ENST00000638963 MT1EP04732 61 aa3.55□□□□□ -1.84
PAX6-246ENST00000638963 SPRR2EP22531 72 aa3.52□□□□□ -1.85
PAX6-246ENST00000638963 SPRR2BP35325 72 aa3.52□□□□□ -1.85
PAX6-246ENST00000638963 SPRR2AP35326 72 aa3.52□□□□□ -1.85
PAX6-246ENST00000638963 MDN1Q9NU22 5596 aa3.52□□□□□ -1.85
PAX6-246ENST00000638963 NEBP20929 6669 aa3.51□□□□□ -1.85
PAX6-246ENST00000638963 LCE1AQ5T7P2 110 aa3.51□□□□□ -1.85
PAX6-246ENST00000638963 KRTAP12-3P60328 96 aa3.49□□□□□ -1.85
PAX6-246ENST00000638963 KRTAP19-3Q7Z4W3 81 aa3.43□□□□□ -1.86
PAX6-246ENST00000638963 MT1LQ93083 61 aa3.43□□□□□ -1.86
PAX6-246ENST00000638963 SPRR2DP22532 72 aa3.39□□□□□ -1.87
PAX6-246ENST00000638963 MT1GP13640 62 aa3.35□□□□□ -1.87
PAX6-246ENST00000638963 MT1MQ8N339 61 aa3.35□□□□□ -1.87
PAX6-246ENST00000638963 KRTAP4-3Q9BYR4 195 aa3.33□□□□□ -1.88
PAX6-246ENST00000638963 KRTAP20-1Q3LI63 56 aa3.29□□□□□ -1.88
PAX6-246ENST00000638963 KRTAP2-3P0C7H8 128 aa3.27□□□□□ -1.89
PAX6-246ENST00000638963 KRTAP2-4Q9BYR9 128 aa3.27□□□□□ -1.89
PAX6-246ENST00000638963 LCE3CQ5T5A8 94 aa3.25□□□□□ -1.89
PAX6-246ENST00000638963 DSTQ03001 7570 aaKnown RBP3.22□□□□□ -1.89
PAX6-246ENST00000638963 KRTAP2-2Q9BYT5 123 aa3.18□□□□□ -1.9
PAX6-246ENST00000638963 KRTAP2-1Q9BYU5 128 aa3.18□□□□□ -1.9
PAX6-246ENST00000638963 KRTAP9-6A8MVA2 160 aa3.1□□□□□ -1.91
PAX6-246ENST00000638963 KRTAP5-5Q701N2 237 aaPredicted RBP3.04□□□□□ -1.92
PAX6-246ENST00000638963 KRTAP5-4Q6L8H1 288 aa3□□□□□ -1.93
PAX6-246ENST00000638963 MT4P47944 62 aa2.97□□□□□ -1.93
PAX6-246ENST00000638963 MT1AP04731 61 aa2.91□□□□□ -1.94
PAX6-246ENST00000638963 KRTAP6-1Q3LI64 71 aa2.91□□□□□ -1.94
PAX6-246ENST00000638963 HMCN1Q96RW7 5635 aa2.88□□□□□ -1.95
PAX6-246ENST00000638963 GPR98Q8WXG9 6306 aa2.86□□□□□ -1.95
PAX6-246ENST00000638963 KRTAP12-4P60329 112 aa2.84□□□□□ -1.95
PAX6-246ENST00000638963 SYNE1Q8NF91 8797 aaKnown RBP2.84□□□□□ -1.95
PAX6-246ENST00000638963 KRTAP20-2Q3LI61 65 aa2.83□□□□□ -1.96
PAX6-246ENST00000638963 MT3P25713 68 aa2.79□□□□□ -1.96
PAX6-246ENST00000638963 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.79□□□□□ -1.96
PAX6-246ENST00000638963 KRTAP6-2Q3LI66 62 aa2.72□□□□□ -1.97
PAX6-246ENST00000638963 LCE1FQ5T754 118 aa2.71□□□□□ -1.98
PAX6-246ENST00000638963 AHNAK2Q8IVF2 5795 aa2.68□□□□□ -1.98
PAX6-246ENST00000638963 KRTAP5-2Q701N4 177 aa2.68□□□□□ -1.98
PAX6-246ENST00000638963 KRTAP5-10Q6L8G5 202 aa2.57□□□□□ -2
PAX6-246ENST00000638963 LCE1EQ5T753 118 aa2.5□□□□□ -2.01
PAX6-246ENST00000638963 KRTAP5-11Q6L8G4 156 aa2.46□□□□□ -2.02
PAX6-246ENST00000638963 LCE3EQ5T5B0 92 aa2.44□□□□□ -2.02
PAX6-246ENST00000638963 OBSCNQ5VST9 7968 aa2.44□□□□□ -2.02
PAX6-246ENST00000638963 PRM1P04553 51 aa2.43□□□□□ -2.02
PAX6-246ENST00000638963 KRTAP5-8O75690 187 aa2.41□□□□□ -2.02
PAX6-246ENST00000638963 KRTAP5-7Q6L8G8 165 aa2.4□□□□□ -2.02
PAX6-246ENST00000638963 LCE3DQ9BYE3 92 aa2.4□□□□□ -2.03
PAX6-246ENST00000638963 KRTAP5-1Q6L8H4 278 aa2.36□□□□□ -2.03
PAX6-246ENST00000638963 KRTAP4-4Q9BYR3 166 aa2.29□□□□□ -2.04
PAX6-246ENST00000638963 MUC5ACP98088 5654 aa2.27□□□□□ -2.05
PAX6-246ENST00000638963 LCE1BQ5T7P3 118 aa2.23□□□□□ -2.05
PAX6-246ENST00000638963 AHNAKQ09666 5890 aaKnown RBP2.21□□□□□ -2.06
PAX6-246ENST00000638963 LCE1CQ5T751 118 aa2.16□□□□□ -2.06
PAX6-246ENST00000638963 MUC5BQ9HC84 5762 aaPredicted RBP2.14□□□□□ -2.07
PAX6-246ENST00000638963 KRTAP21-2Q3LI59 83 aa1.9□□□□□ -2.1
PAX6-246ENST00000638963 PHGR1C9JFL3 82 aa1.68□□□□□ -2.14
PAX6-246ENST00000638963 KRTAP21-1Q3LI58 79 aa1.67□□□□□ -2.14
PAX6-246ENST00000638963 MUC19Q7Z5P9 8384 aa1.46□□□□□ -2.18
PAX6-246ENST00000638963 MUC16Q8WXI7 14507 aa1.05□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 167.9 ms