RNA–Protein interactions for RNA: ENST00000638531.1

KCNMA1-239, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5

Gene KCNMA1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-239ENST00000638531 H3BS24 57 aa5.38□□□□□ -1.55
KCNMA1-239ENST00000638531 DSTQ03001 7570 aaKnown RBP5.37□□□□□ -1.55
KCNMA1-239ENST00000638531 C10orf95Q9H7T3 257 aa5.37□□□□□ -1.55
KCNMA1-239ENST00000638531 LCE5AQ5TCM9 118 aa5.35□□□□□ -1.55
KCNMA1-239ENST00000638531 KRTAP19-3Q7Z4W3 81 aa5.35□□□□□ -1.55
KCNMA1-239ENST00000638531 TNP1P09430 55 aa5.34□□□□□ -1.55
KCNMA1-239ENST00000638531 KRTAP19-5Q3LI72 72 aa5.33□□□□□ -1.56
KCNMA1-239ENST00000638531 KRTAP4-11Q9BYQ6 195 aa5.31□□□□□ -1.56
KCNMA1-239ENST00000638531 LCE3AQ5TA76 89 aa5.28□□□□□ -1.56
KCNMA1-239ENST00000638531 V9GYY9 64 aa5.28□□□□□ -1.56
KCNMA1-239ENST00000638531 MIR22HGQ0VDD5 57 aa5.26□□□□□ -1.57
KCNMA1-239ENST00000638531 PCP4P48539 62 aa5.25□□□□□ -1.57
KCNMA1-239ENST00000638531 Q1T7F1 81 aa5.24□□□□□ -1.57
KCNMA1-239ENST00000638531 MT1GP13640 62 aa5.23□□□□□ -1.57
KCNMA1-239ENST00000638531 PSPHP1O15172 72 aa5.2□□□□□ -1.58
KCNMA1-239ENST00000638531 PP632Q6XCG6 107 aa5.2□□□□□ -1.58
KCNMA1-239ENST00000638531 MT1LQ93083 61 aa5.19□□□□□ -1.58
KCNMA1-239ENST00000638531 K7ERS5 55 aa5.15□□□□□ -1.59
KCNMA1-239ENST00000638531 MT1MQ8N339 61 aa5.15□□□□□ -1.59
KCNMA1-239ENST00000638531 HMCN1Q96RW7 5635 aa5.13□□□□□ -1.59
KCNMA1-239ENST00000638531 KRTAP25-1Q3LHN0 102 aa5.11□□□□□ -1.59
KCNMA1-239ENST00000638531 AHNAK2Q8IVF2 5795 aa5.08□□□□□ -1.6
KCNMA1-239ENST00000638531 KRTAP12-3P60328 96 aa5.08□□□□□ -1.6
KCNMA1-239ENST00000638531 A6NED7 52 aa5.05□□□□□ -1.6
KCNMA1-239ENST00000638531 RPS28P62857 69 aaKnown RBP5.05□□□□□ -1.6
KCNMA1-239ENST00000638531 KRTAP5-10Q6L8G5 202 aa5□□□□□ -1.61
KCNMA1-239ENST00000638531 MT4P47944 62 aa4.98□□□□□ -1.61
KCNMA1-239ENST00000638531 KRTAP4-3Q9BYR4 195 aa4.98□□□□□ -1.61
KCNMA1-239ENST00000638531 KRTAP23-1A1A580 65 aa4.93□□□□□ -1.62
KCNMA1-239ENST00000638531 KRTAP5-7Q6L8G8 165 aa4.92□□□□□ -1.62
KCNMA1-239ENST00000638531 CDC42SE1Q9NRR8 79 aa4.9□□□□□ -1.63
KCNMA1-239ENST00000638531 SPRR5A0A1B0GTR4 108 aa4.87□□□□□ -1.63
KCNMA1-239ENST00000638531 KRTAP5-4Q6L8H1 288 aa4.87□□□□□ -1.63
KCNMA1-239ENST00000638531 ROMO1P60602 79 aa4.82□□□□□ -1.64
KCNMA1-239ENST00000638531 KRTAP5-3Q6L8H2 238 aa4.81□□□□□ -1.64
KCNMA1-239ENST00000638531 SVIPQ8NHG7 77 aa4.81□□□□□ -1.64
KCNMA1-239ENST00000638531 KRTAP15-1Q3LI76 137 aa4.78□□□□□ -1.64
KCNMA1-239ENST00000638531 KRTAP5-5Q701N2 237 aaPredicted RBP4.73□□□□□ -1.65
KCNMA1-239ENST00000638531 LCE3CQ5T5A8 94 aa4.68□□□□□ -1.66
KCNMA1-239ENST00000638531 KRTAP20-2Q3LI61 65 aa4.57□□□□□ -1.68
KCNMA1-239ENST00000638531 SYNE1Q8NF91 8797 aaKnown RBP4.56□□□□□ -1.68
KCNMA1-239ENST00000638531 AHNAKQ09666 5890 aaKnown RBP4.55□□□□□ -1.68
KCNMA1-239ENST00000638531 KRTAP12-4P60329 112 aa4.55□□□□□ -1.68
KCNMA1-239ENST00000638531 BRK1Q8WUW1 75 aa4.47□□□□□ -1.69
KCNMA1-239ENST00000638531 MT1AP04731 61 aa4.43□□□□□ -1.7
KCNMA1-239ENST00000638531 KRTAP9-6A8MVA2 160 aa4.42□□□□□ -1.7
KCNMA1-239ENST00000638531 MUC5ACP98088 5654 aa4.38□□□□□ -1.71
KCNMA1-239ENST00000638531 KRTAP6-1Q3LI64 71 aa4.38□□□□□ -1.71
KCNMA1-239ENST00000638531 MUC5BQ9HC84 5762 aaPredicted RBP4.31□□□□□ -1.72
KCNMA1-239ENST00000638531 KRTAP5-2Q701N4 177 aa4.29□□□□□ -1.72
KCNMA1-239ENST00000638531 PMAIP1Q13794 54 aa4.24□□□□□ -1.73
KCNMA1-239ENST00000638531 PRO0628Q9UI54 55 aa4.2□□□□□ -1.74
KCNMA1-239ENST00000638531 KRTAP6-2Q3LI66 62 aa4.15□□□□□ -1.75
KCNMA1-239ENST00000638531 KRTAP5-8O75690 187 aa4.13□□□□□ -1.75
KCNMA1-239ENST00000638531 A0A0A0MQY5 61 aa4.06□□□□□ -1.76
KCNMA1-239ENST00000638531 MT3P25713 68 aa4.03□□□□□ -1.76
KCNMA1-239ENST00000638531 OBSCNQ5VST9 7968 aa4.01□□□□□ -1.77
KCNMA1-239ENST00000638531 PRAC1Q96KF2 57 aa4□□□□□ -1.77
KCNMA1-239ENST00000638531 KTN1-AS1Q86SY8 53 aa3.86□□□□□ -1.79
KCNMA1-239ENST00000638531 KRTAP5-1Q6L8H4 278 aa3.81□□□□□ -1.8
KCNMA1-239ENST00000638531 LCE1EQ5T753 118 aa3.7□□□□□ -1.82
KCNMA1-239ENST00000638531 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.58□□□□□ -1.84
KCNMA1-239ENST00000638531 KRTAP5-11Q6L8G4 156 aa3.57□□□□□ -1.84
KCNMA1-239ENST00000638531 LCE1CQ5T751 118 aa3.42□□□□□ -1.86
KCNMA1-239ENST00000638531 LCE1BQ5T7P3 118 aa3.42□□□□□ -1.86
KCNMA1-239ENST00000638531 LCE3DQ9BYE3 92 aa3.39□□□□□ -1.87
KCNMA1-239ENST00000638531 LUZP6Q538Z0 58 aa3.36□□□□□ -1.87
KCNMA1-239ENST00000638531 LCE3EQ5T5B0 92 aa3.21□□□□□ -1.9
KCNMA1-239ENST00000638531 NDUFAF8A1L188 74 aa3.05□□□□□ -1.92
KCNMA1-239ENST00000638531 PHGR1C9JFL3 82 aa3.02□□□□□ -1.93
KCNMA1-239ENST00000638531 LCE1FQ5T754 118 aa3.01□□□□□ -1.93
KCNMA1-239ENST00000638531 KRTAP4-4Q9BYR3 166 aa3□□□□□ -1.93
KCNMA1-239ENST00000638531 KRTAP21-2Q3LI59 83 aa2.89□□□□□ -1.95
KCNMA1-239ENST00000638531 INE1O15225 51 aa2.59□□□□□ -1.99
KCNMA1-239ENST00000638531 MUC19Q7Z5P9 8384 aa2.49□□□□□ -2.01
KCNMA1-239ENST00000638531 PRM1P04553 51 aa2.47□□□□□ -2.01
KCNMA1-239ENST00000638531 KRTAP21-1Q3LI58 79 aa2.34□□□□□ -2.03
KCNMA1-239ENST00000638531 MUC16Q8WXI7 14507 aa1.73□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 93.5 ms