RNA–Protein interactions for RNA: ENST00000638443.1

ATM-226, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 2,146 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-226ENST00000638443 KRTAP10-7P60409 375 aaPredicted RBP3.97□□□□□ -1.77
ATM-226ENST00000638443 SSPOA2VEC9 5147 aa3.95□□□□□ -1.78
ATM-226ENST00000638443 LCE3AQ5TA76 89 aa3.93□□□□□ -1.78
ATM-226ENST00000638443 KRTAP5-3Q6L8H2 238 aa3.92□□□□□ -1.78
ATM-226ENST00000638443 KMT2DO14686 5537 aa3.91□□□□□ -1.78
ATM-226ENST00000638443 KRTAP10-12P60413 245 aa3.88□□□□□ -1.79
ATM-226ENST00000638443 KRTAP19-6Q3LI70 58 aa3.82□□□□□ -1.8
ATM-226ENST00000638443 KRTAP4-2Q9BYR5 136 aa3.8□□□□□ -1.8
ATM-226ENST00000638443 MT3P25713 68 aa3.8□□□□□ -1.8
ATM-226ENST00000638443 KRTAP4-9Q9BYQ8 210 aa3.79□□□□□ -1.8
ATM-226ENST00000638443 KRTAP4-11Q9BYQ6 195 aa3.79□□□□□ -1.8
ATM-226ENST00000638443 KRTAP8-1Q8IUC2 63 aa3.77□□□□□ -1.81
ATM-226ENST00000638443 FCGBPQ9Y6R7 5405 aaPredicted RBP3.74□□□□□ -1.81
ATM-226ENST00000638443 KRTAP12-3P60328 96 aa3.72□□□□□ -1.81
ATM-226ENST00000638443 KRTAP19-5Q3LI72 72 aa3.72□□□□□ -1.81
ATM-226ENST00000638443 LCE3CQ5T5A8 94 aa3.68□□□□□ -1.82
ATM-226ENST00000638443 KRTAP19-7Q3SYF9 63 aa3.65□□□□□ -1.83
ATM-226ENST00000638443 MACF1Q9UPN3 7388 aaKnown RBP3.62□□□□□ -1.83
ATM-226ENST00000638443 CRCT1Q9UGL9 99 aa3.59□□□□□ -1.84
ATM-226ENST00000638443 SPRR5A0A1B0GTR4 108 aa3.58□□□□□ -1.84
ATM-226ENST00000638443 MT1EP04732 61 aa3.56□□□□□ -1.84
ATM-226ENST00000638443 LCE1EQ5T753 118 aa3.55□□□□□ -1.84
ATM-226ENST00000638443 MUC12Q9UKN1 5478 aa3.54□□□□□ -1.84
ATM-226ENST00000638443 SYNE2Q8WXH0 6885 aaKnown RBP3.51□□□□□ -1.85
ATM-226ENST00000638443 MT1LQ93083 61 aa3.5□□□□□ -1.85
ATM-226ENST00000638443 SPRR2FQ96RM1 72 aa3.46□□□□□ -1.86
ATM-226ENST00000638443 LCE3EQ5T5B0 92 aa3.41□□□□□ -1.86
ATM-226ENST00000638443 KRTAP4-3Q9BYR4 195 aa3.4□□□□□ -1.87
ATM-226ENST00000638443 KRTAP9-6A8MVA2 160 aa3.39□□□□□ -1.87
ATM-226ENST00000638443 KRTAP6-3Q3LI67 103 aa3.38□□□□□ -1.87
ATM-226ENST00000638443 KRTAP19-3Q7Z4W3 81 aa3.38□□□□□ -1.87
ATM-226ENST00000638443 MDN1Q9NU22 5596 aa3.36□□□□□ -1.87
ATM-226ENST00000638443 MT1MQ8N339 61 aa3.35□□□□□ -1.87
ATM-226ENST00000638443 KRTAP5-9P26371 169 aa3.34□□□□□ -1.88
ATM-226ENST00000638443 DSTQ03001 7570 aaKnown RBP3.33□□□□□ -1.88
ATM-226ENST00000638443 MT1GP13640 62 aa3.32□□□□□ -1.88
ATM-226ENST00000638443 SPRR2EP22531 72 aa3.25□□□□□ -1.89
ATM-226ENST00000638443 SPRR2BP35325 72 aa3.25□□□□□ -1.89
ATM-226ENST00000638443 SPRR2AP35326 72 aa3.25□□□□□ -1.89
ATM-226ENST00000638443 KRTAP12-4P60329 112 aa3.23□□□□□ -1.89
ATM-226ENST00000638443 LCE3DQ9BYE3 92 aa3.16□□□□□ -1.9
ATM-226ENST00000638443 SPRR2DP22532 72 aa3.11□□□□□ -1.91
ATM-226ENST00000638443 KRTAP2-3P0C7H8 128 aa3.07□□□□□ -1.92
ATM-226ENST00000638443 KRTAP2-4Q9BYR9 128 aa3.07□□□□□ -1.92
ATM-226ENST00000638443 KRTAP2-1Q9BYU5 128 aa3.07□□□□□ -1.92
ATM-226ENST00000638443 NEBP20929 6669 aa3.03□□□□□ -1.92
ATM-226ENST00000638443 GPR98Q8WXG9 6306 aa3.03□□□□□ -1.92
ATM-226ENST00000638443 KRTAP5-5Q701N2 237 aaPredicted RBP3.01□□□□□ -1.93
ATM-226ENST00000638443 KRTAP6-1Q3LI64 71 aa2.98□□□□□ -1.93
ATM-226ENST00000638443 HMCN1Q96RW7 5635 aa2.97□□□□□ -1.93
ATM-226ENST00000638443 KRTAP20-1Q3LI63 56 aa2.97□□□□□ -1.93
ATM-226ENST00000638443 SYNE1Q8NF91 8797 aaKnown RBP2.97□□□□□ -1.93
ATM-226ENST00000638443 MT1AP04731 61 aa2.93□□□□□ -1.94
ATM-226ENST00000638443 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.81□□□□□ -1.96
ATM-226ENST00000638443 KRTAP5-4Q6L8H1 288 aa2.8□□□□□ -1.96
ATM-226ENST00000638443 MT4P47944 62 aa2.77□□□□□ -1.97
ATM-226ENST00000638443 KRTAP6-2Q3LI66 62 aa2.73□□□□□ -1.97
ATM-226ENST00000638443 OBSCNQ5VST9 7968 aa2.71□□□□□ -1.98
ATM-226ENST00000638443 KRTAP20-2Q3LI61 65 aa2.65□□□□□ -1.98
ATM-226ENST00000638443 KRTAP5-11Q6L8G4 156 aa2.62□□□□□ -1.99
ATM-226ENST00000638443 KRTAP5-2Q701N4 177 aa2.56□□□□□ -2
ATM-226ENST00000638443 MUC5BQ9HC84 5762 aaPredicted RBP2.48□□□□□ -2.01
ATM-226ENST00000638443 AHNAKQ09666 5890 aaKnown RBP2.46□□□□□ -2.02
ATM-226ENST00000638443 AHNAK2Q8IVF2 5795 aa2.45□□□□□ -2.02
ATM-226ENST00000638443 KRTAP5-7Q6L8G8 165 aa2.44□□□□□ -2.02
ATM-226ENST00000638443 PRM1P04553 51 aa2.32□□□□□ -2.04
ATM-226ENST00000638443 KRTAP5-10Q6L8G5 202 aa2.32□□□□□ -2.04
ATM-226ENST00000638443 KRTAP5-1Q6L8H4 278 aa2.29□□□□□ -2.04
ATM-226ENST00000638443 KRTAP4-4Q9BYR3 166 aa2.27□□□□□ -2.05
ATM-226ENST00000638443 LCE1CQ5T751 118 aa2.26□□□□□ -2.05
ATM-226ENST00000638443 LCE1BQ5T7P3 118 aa2.26□□□□□ -2.05
ATM-226ENST00000638443 MUC5ACP98088 5654 aa2.21□□□□□ -2.05
ATM-226ENST00000638443 KRTAP5-8O75690 187 aa2.2□□□□□ -2.06
ATM-226ENST00000638443 MUC19Q7Z5P9 8384 aa2.06□□□□□ -2.08
ATM-226ENST00000638443 KRTAP21-2Q3LI59 83 aa1.94□□□□□ -2.1
ATM-226ENST00000638443 KRTAP21-1Q3LI58 79 aa1.65□□□□□ -2.15
ATM-226ENST00000638443 PHGR1C9JFL3 82 aa1.61□□□□□ -2.15
ATM-226ENST00000638443 MUC16Q8WXI7 14507 aa1.04□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 6.1 ms