RNA–Protein interactions for RNA: ENST00000637625.1

CACNA1A-244, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 1,890 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-244ENST00000637625 KRTAP9-6A8MVA2 160 aa5.42□□□□□ -1.54
CACNA1A-244ENST00000637625 PLAC4Q8WY50 150 aa5.37□□□□□ -1.55
CACNA1A-244ENST00000637625 C10orf95Q9H7T3 257 aa5.35□□□□□ -1.55
CACNA1A-244ENST00000637625 KRTAP19-8Q3LI54 63 aa5.34□□□□□ -1.55
CACNA1A-244ENST00000637625 MT1BP07438 61 aa5.32□□□□□ -1.56
CACNA1A-244ENST00000637625 KRTAP5-11Q6L8G4 156 aa5.32□□□□□ -1.56
CACNA1A-244ENST00000637625 CRCT1Q9UGL9 99 aa5.3□□□□□ -1.56
CACNA1A-244ENST00000637625 LCE3DQ9BYE3 92 aa5.24□□□□□ -1.57
CACNA1A-244ENST00000637625 USH2AO75445 5202 aa5.24□□□□□ -1.57
CACNA1A-244ENST00000637625 MT1XP80297 61 aa5.17□□□□□ -1.58
CACNA1A-244ENST00000637625 FSIP2Q5CZC0 6907 aa5.17□□□□□ -1.58
CACNA1A-244ENST00000637625 TNP1P09430 55 aa5.13□□□□□ -1.59
CACNA1A-244ENST00000637625 SSPOA2VEC9 5147 aa5.05□□□□□ -1.6
CACNA1A-244ENST00000637625 PRO2289Q9P1D8 64 aa5.05□□□□□ -1.6
CACNA1A-244ENST00000637625 LCE3AQ5TA76 89 aa4.98□□□□□ -1.61
CACNA1A-244ENST00000637625 PP632Q6XCG6 107 aa4.95□□□□□ -1.62
CACNA1A-244ENST00000637625 KMT2DO14686 5537 aa4.93□□□□□ -1.62
CACNA1A-244ENST00000637625 KRTAP19-6Q3LI70 58 aa4.89□□□□□ -1.63
CACNA1A-244ENST00000637625 FCGBPQ9Y6R7 5405 aaPredicted RBP4.83□□□□□ -1.64
CACNA1A-244ENST00000637625 KRTAP8-1Q8IUC2 63 aa4.77□□□□□ -1.65
CACNA1A-244ENST00000637625 KRTAP12-3P60328 96 aa4.73□□□□□ -1.65
CACNA1A-244ENST00000637625 KRTAP19-5Q3LI72 72 aa4.71□□□□□ -1.66
CACNA1A-244ENST00000637625 KRTAP6-3Q3LI67 103 aa4.69□□□□□ -1.66
CACNA1A-244ENST00000637625 MACF1Q9UPN3 7388 aaKnown RBP4.69□□□□□ -1.66
CACNA1A-244ENST00000637625 SYNE2Q8WXH0 6885 aaKnown RBP4.62□□□□□ -1.67
CACNA1A-244ENST00000637625 KRTAP19-7Q3SYF9 63 aa4.61□□□□□ -1.67
CACNA1A-244ENST00000637625 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.6□□□□□ -1.67
CACNA1A-244ENST00000637625 MT1EP04732 61 aa4.52□□□□□ -1.69
CACNA1A-244ENST00000637625 MUC12Q9UKN1 5478 aa4.5□□□□□ -1.69
CACNA1A-244ENST00000637625 INE1O15225 51 aa4.47□□□□□ -1.69
CACNA1A-244ENST00000637625 MT1LQ93083 61 aa4.44□□□□□ -1.7
CACNA1A-244ENST00000637625 SPRR2FQ96RM1 72 aa4.43□□□□□ -1.7
CACNA1A-244ENST00000637625 KRTAP5-1Q6L8H4 278 aa4.41□□□□□ -1.7
CACNA1A-244ENST00000637625 NEBP20929 6669 aa4.4□□□□□ -1.7
CACNA1A-244ENST00000637625 KRTAP5-9P26371 169 aa4.37□□□□□ -1.71
CACNA1A-244ENST00000637625 KRTAP5-5Q701N2 237 aaPredicted RBP4.35□□□□□ -1.71
CACNA1A-244ENST00000637625 KRTAP19-3Q7Z4W3 81 aa4.32□□□□□ -1.72
CACNA1A-244ENST00000637625 MDN1Q9NU22 5596 aa4.31□□□□□ -1.72
CACNA1A-244ENST00000637625 KRTAP20-1Q3LI63 56 aa4.3□□□□□ -1.72
CACNA1A-244ENST00000637625 KRTAP4-3Q9BYR4 195 aa4.27□□□□□ -1.73
CACNA1A-244ENST00000637625 MT1MQ8N339 61 aa4.26□□□□□ -1.73
CACNA1A-244ENST00000637625 HMCN1Q96RW7 5635 aa4.26□□□□□ -1.73
CACNA1A-244ENST00000637625 MT1GP13640 62 aa4.24□□□□□ -1.73
CACNA1A-244ENST00000637625 KRTAP2-3P0C7H8 128 aa4.2□□□□□ -1.74
CACNA1A-244ENST00000637625 KRTAP2-4Q9BYR9 128 aa4.2□□□□□ -1.74
CACNA1A-244ENST00000637625 SPRR2EP22531 72 aa4.18□□□□□ -1.74
CACNA1A-244ENST00000637625 SPRR2BP35325 72 aa4.18□□□□□ -1.74
CACNA1A-244ENST00000637625 SPRR2AP35326 72 aa4.18□□□□□ -1.74
CACNA1A-244ENST00000637625 DSTQ03001 7570 aaKnown RBP4.12□□□□□ -1.75
CACNA1A-244ENST00000637625 KRTAP2-1Q9BYU5 128 aa4.06□□□□□ -1.76
CACNA1A-244ENST00000637625 SPRR2DP22532 72 aa4.03□□□□□ -1.76
CACNA1A-244ENST00000637625 OBSCNQ5VST9 7968 aa3.92□□□□□ -1.78
CACNA1A-244ENST00000637625 KRTAP4-4Q9BYR3 166 aa3.88□□□□□ -1.79
CACNA1A-244ENST00000637625 KRTAP12-4P60329 112 aa3.86□□□□□ -1.79
CACNA1A-244ENST00000637625 LCE1CQ5T751 118 aa3.86□□□□□ -1.79
CACNA1A-244ENST00000637625 LCE1BQ5T7P3 118 aa3.86□□□□□ -1.79
CACNA1A-244ENST00000637625 KRTAP6-1Q3LI64 71 aa3.77□□□□□ -1.81
CACNA1A-244ENST00000637625 MT1AP04731 61 aa3.75□□□□□ -1.81
CACNA1A-244ENST00000637625 KRTAP5-4Q6L8H1 288 aa3.75□□□□□ -1.81
CACNA1A-244ENST00000637625 SYNE1Q8NF91 8797 aaKnown RBP3.75□□□□□ -1.81
CACNA1A-244ENST00000637625 GPR98Q8WXG9 6306 aa3.6□□□□□ -1.83
CACNA1A-244ENST00000637625 MT4P47944 62 aa3.54□□□□□ -1.84
CACNA1A-244ENST00000637625 KRTAP6-2Q3LI66 62 aa3.46□□□□□ -1.86
CACNA1A-244ENST00000637625 AHNAK2Q8IVF2 5795 aa3.41□□□□□ -1.86
CACNA1A-244ENST00000637625 KRTAP5-7Q6L8G8 165 aa3.41□□□□□ -1.86
CACNA1A-244ENST00000637625 KRTAP20-2Q3LI61 65 aa3.39□□□□□ -1.87
CACNA1A-244ENST00000637625 KRTAP5-10Q6L8G5 202 aa3.35□□□□□ -1.87
CACNA1A-244ENST00000637625 KRTAP5-2Q701N4 177 aa3.26□□□□□ -1.89
CACNA1A-244ENST00000637625 MUC5BQ9HC84 5762 aaPredicted RBP3.25□□□□□ -1.89
CACNA1A-244ENST00000637625 MUC19Q7Z5P9 8384 aa3.14□□□□□ -1.91
CACNA1A-244ENST00000637625 KRTAP5-8O75690 187 aa2.91□□□□□ -1.94
CACNA1A-244ENST00000637625 PRM1P04553 51 aa2.91□□□□□ -1.94
CACNA1A-244ENST00000637625 MUC5ACP98088 5654 aa2.85□□□□□ -1.95
CACNA1A-244ENST00000637625 AHNAKQ09666 5890 aaKnown RBP2.84□□□□□ -1.95
CACNA1A-244ENST00000637625 KRTAP21-2Q3LI59 83 aa2.75□□□□□ -1.97
CACNA1A-244ENST00000637625 PHGR1C9JFL3 82 aa2.05□□□□□ -2.08
CACNA1A-244ENST00000637625 KRTAP21-1Q3LI58 79 aa1.88□□□□□ -2.11
CACNA1A-244ENST00000637625 MUC16Q8WXI7 14507 aa1.55□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 47.5 ms