RNA–Protein interactions for RNA: ENST00000637297.1

CACNA1A-239, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 637 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-239ENST00000637297 SPRR2BP35325 72 aa3.52□□□□□ -1.85
CACNA1A-239ENST00000637297 SPRR2AP35326 72 aa3.52□□□□□ -1.85
CACNA1A-239ENST00000637297 LCE3BQ5TA77 95 aa3.52□□□□□ -1.85
CACNA1A-239ENST00000637297 NEBP20929 6669 aa3.52□□□□□ -1.85
CACNA1A-239ENST00000637297 LCE3AQ5TA76 89 aa3.5□□□□□ -1.85
CACNA1A-239ENST00000637297 LCE1AQ5T7P2 110 aa3.45□□□□□ -1.86
CACNA1A-239ENST00000637297 MDN1Q9NU22 5596 aa3.45□□□□□ -1.86
CACNA1A-239ENST00000637297 LCE4AQ5TA78 99 aa3.44□□□□□ -1.86
CACNA1A-239ENST00000637297 KRTAP20-1Q3LI63 56 aa3.42□□□□□ -1.86
CACNA1A-239ENST00000637297 KRTAP19-7Q3SYF9 63 aa3.41□□□□□ -1.86
CACNA1A-239ENST00000637297 SPRR2DP22532 72 aa3.4□□□□□ -1.87
CACNA1A-239ENST00000637297 KRTAP19-5Q3LI72 72 aa3.4□□□□□ -1.87
CACNA1A-239ENST00000637297 KRTAP9-9Q9BYP9 154 aa3.39□□□□□ -1.87
CACNA1A-239ENST00000637297 KRTAP9-4Q9BYQ2 154 aa3.39□□□□□ -1.87
CACNA1A-239ENST00000637297 MT1EP04732 61 aa3.38□□□□□ -1.87
CACNA1A-239ENST00000637297 KRTAP2-3P0C7H8 128 aa3.38□□□□□ -1.87
CACNA1A-239ENST00000637297 KRTAP12-3P60328 96 aa3.38□□□□□ -1.87
CACNA1A-239ENST00000637297 KRTAP2-4Q9BYR9 128 aa3.38□□□□□ -1.87
CACNA1A-239ENST00000637297 KRTAP15-1Q3LI76 137 aa3.37□□□□□ -1.87
CACNA1A-239ENST00000637297 KRTAP19-3Q7Z4W3 81 aa3.34□□□□□ -1.87
CACNA1A-239ENST00000637297 LCE1DQ5T752 114 aa3.31□□□□□ -1.88
CACNA1A-239ENST00000637297 LCE5AQ5TCM9 118 aa3.3□□□□□ -1.88
CACNA1A-239ENST00000637297 MT1GP13640 62 aa3.29□□□□□ -1.88
CACNA1A-239ENST00000637297 KRTAP2-2Q9BYT5 123 aa3.28□□□□□ -1.88
CACNA1A-239ENST00000637297 KRTAP2-1Q9BYU5 128 aa3.28□□□□□ -1.88
CACNA1A-239ENST00000637297 MT1LQ93083 61 aa3.27□□□□□ -1.89
CACNA1A-239ENST00000637297 LUZP6Q538Z0 58 aa3.23□□□□□ -1.89
CACNA1A-239ENST00000637297 SPRR5A0A1B0GTR4 108 aa3.22□□□□□ -1.89
CACNA1A-239ENST00000637297 MT1MQ8N339 61 aa3.22□□□□□ -1.89
CACNA1A-239ENST00000637297 DSTQ03001 7570 aaKnown RBP3.18□□□□□ -1.9
CACNA1A-239ENST00000637297 KRTAP4-7Q9BYR0 210 aa3.18□□□□□ -1.9
CACNA1A-239ENST00000637297 NDUFAF8A1L188 74 aa3.17□□□□□ -1.9
CACNA1A-239ENST00000637297 KRTAP4-9Q9BYQ8 210 aa3.17□□□□□ -1.9
CACNA1A-239ENST00000637297 LCE3CQ5T5A8 94 aa3.16□□□□□ -1.9
CACNA1A-239ENST00000637297 A0A0A0MQY5 61 aa3.13□□□□□ -1.91
CACNA1A-239ENST00000637297 KRTAP4-3Q9BYR4 195 aa3.13□□□□□ -1.91
CACNA1A-239ENST00000637297 KRTAP4-11Q9BYQ6 195 aa3.1□□□□□ -1.91
CACNA1A-239ENST00000637297 KRTAP4-2Q9BYR5 136 aa3.01□□□□□ -1.93
CACNA1A-239ENST00000637297 MT4P47944 62 aa2.96□□□□□ -1.94
CACNA1A-239ENST00000637297 KRTAP9-6A8MVA2 160 aa2.95□□□□□ -1.94
CACNA1A-239ENST00000637297 KRTAP5-4Q6L8H1 288 aa2.94□□□□□ -1.94
CACNA1A-239ENST00000637297 GPR98Q8WXG9 6306 aa2.94□□□□□ -1.94
CACNA1A-239ENST00000637297 KRTAP5-5Q701N2 237 aaPredicted RBP2.9□□□□□ -1.95
CACNA1A-239ENST00000637297 KRTAP12-4P60329 112 aa2.86□□□□□ -1.95
CACNA1A-239ENST00000637297 KRTAP5-3Q6L8H2 238 aa2.84□□□□□ -1.95
CACNA1A-239ENST00000637297 HMCN1Q96RW7 5635 aa2.81□□□□□ -1.96
CACNA1A-239ENST00000637297 MT1AP04731 61 aa2.79□□□□□ -1.96
CACNA1A-239ENST00000637297 KRTAP20-2Q3LI61 65 aa2.78□□□□□ -1.96
CACNA1A-239ENST00000637297 KRTAP6-1Q3LI64 71 aa2.76□□□□□ -1.97
CACNA1A-239ENST00000637297 SYNE1Q8NF91 8797 aaKnown RBP2.75□□□□□ -1.97
CACNA1A-239ENST00000637297 AHNAK2Q8IVF2 5795 aa2.67□□□□□ -1.98
CACNA1A-239ENST00000637297 MT3P25713 68 aa2.65□□□□□ -1.99
CACNA1A-239ENST00000637297 INE1O15225 51 aa2.63□□□□□ -1.99
CACNA1A-239ENST00000637297 KRTAP5-10Q6L8G5 202 aa2.62□□□□□ -1.99
CACNA1A-239ENST00000637297 KRTAP6-2Q3LI66 62 aa2.61□□□□□ -1.99
CACNA1A-239ENST00000637297 KRTAP5-2Q701N4 177 aa2.59□□□□□ -1.99
CACNA1A-239ENST00000637297 KRTAP5-7Q6L8G8 165 aa2.5□□□□□ -2.01
CACNA1A-239ENST00000637297 OBSCNQ5VST9 7968 aa2.42□□□□□ -2.02
CACNA1A-239ENST00000637297 KRTAP5-8O75690 187 aa2.4□□□□□ -2.03
CACNA1A-239ENST00000637297 LCE3DQ9BYE3 92 aa2.39□□□□□ -2.03
CACNA1A-239ENST00000637297 LCE3EQ5T5B0 92 aa2.34□□□□□ -2.03
CACNA1A-239ENST00000637297 KRTAP5-1Q6L8H4 278 aa2.3□□□□□ -2.04
CACNA1A-239ENST00000637297 LCE1EQ5T753 118 aa2.29□□□□□ -2.04
CACNA1A-239ENST00000637297 LCE1FQ5T754 118 aa2.29□□□□□ -2.04
CACNA1A-239ENST00000637297 AHNAKQ09666 5890 aaKnown RBP2.24□□□□□ -2.05
CACNA1A-239ENST00000637297 MUC5ACP98088 5654 aa2.21□□□□□ -2.06
CACNA1A-239ENST00000637297 MUC5BQ9HC84 5762 aaPredicted RBP2.19□□□□□ -2.06
CACNA1A-239ENST00000637297 LCE1BQ5T7P3 118 aa2.18□□□□□ -2.06
CACNA1A-239ENST00000637297 LCE1CQ5T751 118 aa2.12□□□□□ -2.07
CACNA1A-239ENST00000637297 PRM1P04553 51 aa2.06□□□□□ -2.08
CACNA1A-239ENST00000637297 KRTAP5-11Q6L8G4 156 aa2.06□□□□□ -2.08
CACNA1A-239ENST00000637297 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.01□□□□□ -2.09
CACNA1A-239ENST00000637297 KRTAP21-2Q3LI59 83 aa1.8□□□□□ -2.12
CACNA1A-239ENST00000637297 KRTAP4-4Q9BYR3 166 aa1.71□□□□□ -2.14
CACNA1A-239ENST00000637297 PHGR1C9JFL3 82 aa1.63□□□□□ -2.15
CACNA1A-239ENST00000637297 MUC19Q7Z5P9 8384 aa1.48□□□□□ -2.17
CACNA1A-239ENST00000637297 KRTAP21-1Q3LI58 79 aa1.26□□□□□ -2.21
CACNA1A-239ENST00000637297 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 38.7 ms