RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 SYNE2Q8WXH0 6885 aaKnown RBP4.27□□□□□ -1.73
CLN8-212ENST00000637083 MT1EP04732 61 aa4.26□□□□□ -1.73
CLN8-212ENST00000637083 MT1LQ93083 61 aa4.24□□□□□ -1.73
CLN8-212ENST00000637083 INE1O15225 51 aa4.22□□□□□ -1.73
CLN8-212ENST00000637083 KRTAP20-1Q3LI63 56 aa4.19□□□□□ -1.74
CLN8-212ENST00000637083 KRTAP6-3Q3LI67 103 aa4.18□□□□□ -1.74
CLN8-212ENST00000637083 KRTAP4-7Q9BYR0 210 aa4.17□□□□□ -1.74
CLN8-212ENST00000637083 KRTAP9-6A8MVA2 160 aa4.14□□□□□ -1.75
CLN8-212ENST00000637083 MUC12Q9UKN1 5478 aa4.11□□□□□ -1.75
CLN8-212ENST00000637083 NEBP20929 6669 aa4.11□□□□□ -1.75
CLN8-212ENST00000637083 MT1GP13640 62 aa4.06□□□□□ -1.76
CLN8-212ENST00000637083 KRTAP2-3P0C7H8 128 aa4.05□□□□□ -1.76
CLN8-212ENST00000637083 KRTAP19-3Q7Z4W3 81 aa4.05□□□□□ -1.76
CLN8-212ENST00000637083 KRTAP2-4Q9BYR9 128 aa4.05□□□□□ -1.76
CLN8-212ENST00000637083 KRTAP2-1Q9BYU5 128 aa4.05□□□□□ -1.76
CLN8-212ENST00000637083 MT1MQ8N339 61 aa4□□□□□ -1.77
CLN8-212ENST00000637083 MDN1Q9NU22 5596 aa3.97□□□□□ -1.77
CLN8-212ENST00000637083 KRTAP4-3Q9BYR4 195 aa3.97□□□□□ -1.77
CLN8-212ENST00000637083 KRTAP5-9P26371 169 aa3.95□□□□□ -1.78
CLN8-212ENST00000637083 SPRR2FQ96RM1 72 aa3.94□□□□□ -1.78
CLN8-212ENST00000637083 LCE5AQ5TCM9 118 aa3.91□□□□□ -1.78
CLN8-212ENST00000637083 LOC100996750A0A140TA64 210 aa3.9□□□□□ -1.79
CLN8-212ENST00000637083 GPR98Q8WXG9 6306 aa3.87□□□□□ -1.79
CLN8-212ENST00000637083 DSTQ03001 7570 aaKnown RBP3.84□□□□□ -1.79
CLN8-212ENST00000637083 SPRR2EP22531 72 aa3.75□□□□□ -1.81
CLN8-212ENST00000637083 SPRR2BP35325 72 aa3.75□□□□□ -1.81
CLN8-212ENST00000637083 SPRR2AP35326 72 aa3.75□□□□□ -1.81
CLN8-212ENST00000637083 KRTAP2-2Q9BYT5 123 aa3.75□□□□□ -1.81
CLN8-212ENST00000637083 LCE1AQ5T7P2 110 aa3.73□□□□□ -1.81
CLN8-212ENST00000637083 SPRR2DP22532 72 aa3.63□□□□□ -1.83
CLN8-212ENST00000637083 MT1AP04731 61 aa3.61□□□□□ -1.83
CLN8-212ENST00000637083 LCE3BQ5TA77 95 aa3.56□□□□□ -1.84
CLN8-212ENST00000637083 KRTAP6-1Q3LI64 71 aa3.56□□□□□ -1.84
CLN8-212ENST00000637083 KRTAP5-5Q701N2 237 aaPredicted RBP3.54□□□□□ -1.84
CLN8-212ENST00000637083 KRTAP12-4P60329 112 aa3.53□□□□□ -1.84
CLN8-212ENST00000637083 SYNE1Q8NF91 8797 aaKnown RBP3.48□□□□□ -1.85
CLN8-212ENST00000637083 KRTAP4-9Q9BYQ8 210 aa3.41□□□□□ -1.86
CLN8-212ENST00000637083 LCE3DQ9BYE3 92 aa3.41□□□□□ -1.86
CLN8-212ENST00000637083 KRTAP9-4Q9BYQ2 154 aa3.41□□□□□ -1.86
CLN8-212ENST00000637083 LCE3EQ5T5B0 92 aa3.36□□□□□ -1.87
CLN8-212ENST00000637083 AHNAK2Q8IVF2 5795 aa3.3□□□□□ -1.88
CLN8-212ENST00000637083 KRTAP5-7Q6L8G8 165 aa3.29□□□□□ -1.88
CLN8-212ENST00000637083 MT3P25713 68 aa3.29□□□□□ -1.88
CLN8-212ENST00000637083 KRTAP5-10Q6L8G5 202 aa3.28□□□□□ -1.88
CLN8-212ENST00000637083 HMCN1Q96RW7 5635 aa3.25□□□□□ -1.89
CLN8-212ENST00000637083 LCE1DQ5T752 114 aa3.24□□□□□ -1.89
CLN8-212ENST00000637083 KRTAP6-2Q3LI66 62 aa3.22□□□□□ -1.89
CLN8-212ENST00000637083 KRTAP5-4Q6L8H1 288 aa3.22□□□□□ -1.89
CLN8-212ENST00000637083 LCE4AQ5TA78 99 aa3.22□□□□□ -1.89
CLN8-212ENST00000637083 KRTAP4-6Q9BYQ5 205 aa3.21□□□□□ -1.9
CLN8-212ENST00000637083 MT4P47944 62 aa3.17□□□□□ -1.9
CLN8-212ENST00000637083 OBSCNQ5VST9 7968 aa3.1□□□□□ -1.91
CLN8-212ENST00000637083 PRM1P04553 51 aa3.09□□□□□ -1.92
CLN8-212ENST00000637083 KRTAP5-3Q6L8H2 238 aa3.03□□□□□ -1.92
CLN8-212ENST00000637083 AHNAKQ09666 5890 aaKnown RBP3.02□□□□□ -1.93
CLN8-212ENST00000637083 KRTAP20-2Q3LI61 65 aa3.02□□□□□ -1.93
CLN8-212ENST00000637083 KRTAP5-2Q701N4 177 aa2.98□□□□□ -1.93
CLN8-212ENST00000637083 MUC5BQ9HC84 5762 aaPredicted RBP2.94□□□□□ -1.94
CLN8-212ENST00000637083 MUC5ACP98088 5654 aa2.82□□□□□ -1.96
CLN8-212ENST00000637083 LCE1EQ5T753 118 aa2.75□□□□□ -1.97
CLN8-212ENST00000637083 KRTAP4-11Q9BYQ6 195 aa2.73□□□□□ -1.97
CLN8-212ENST00000637083 KRTAP5-8O75690 187 aa2.64□□□□□ -1.99
CLN8-212ENST00000637083 LCE1BQ5T7P3 118 aa2.59□□□□□ -2
CLN8-212ENST00000637083 KRTAP9-9Q9BYP9 154 aa2.57□□□□□ -2
CLN8-212ENST00000637083 LCE1CQ5T751 118 aa2.56□□□□□ -2
CLN8-212ENST00000637083 KRTAP5-1Q6L8H4 278 aa2.56□□□□□ -2
CLN8-212ENST00000637083 KRTAP4-2Q9BYR5 136 aa2.52□□□□□ -2.01
CLN8-212ENST00000637083 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.42□□□□□ -2.02
CLN8-212ENST00000637083 KRTAP21-2Q3LI59 83 aa2.31□□□□□ -2.04
CLN8-212ENST00000637083 KRTAP5-11Q6L8G4 156 aa2.22□□□□□ -2.05
CLN8-212ENST00000637083 KRTAP4-4Q9BYR3 166 aa2.08□□□□□ -2.08
CLN8-212ENST00000637083 KRTAP4-12Q9BQ66 201 aa2.07□□□□□ -2.08
CLN8-212ENST00000637083 KRTAP21-1Q3LI58 79 aa1.95□□□□□ -2.1
CLN8-212ENST00000637083 LCE1FQ5T754 118 aa1.95□□□□□ -2.1
CLN8-212ENST00000637083 PHGR1C9JFL3 82 aa1.94□□□□□ -2.1
CLN8-212ENST00000637083 MUC19Q7Z5P9 8384 aa1.87□□□□□ -2.11
CLN8-212ENST00000637083 MUC16Q8WXI7 14507 aa1.24□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 11.2 ms