RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 KRTAP12-1P59990 96 aa2.82□□□□□ -1.96
UPF3B-205ENST00000636792 A0A0D9SG42 100 aa2.81□□□□□ -1.96
UPF3B-205ENST00000636792 A6NED7 52 aa2.81□□□□□ -1.96
UPF3B-205ENST00000636792 KRTAP20-1Q3LI63 56 aa2.81□□□□□ -1.96
UPF3B-205ENST00000636792 CAMK2N1Q7Z7J9 78 aa2.81□□□□□ -1.96
UPF3B-205ENST00000636792 K7ERS5 55 aa2.8□□□□□ -1.96
UPF3B-205ENST00000636792 MT1XP80297 61 aa2.79□□□□□ -1.96
UPF3B-205ENST00000636792 SPINT4Q6UDR6 99 aa2.79□□□□□ -1.96
UPF3B-205ENST00000636792 FCGBPQ9Y6R7 5405 aaPredicted RBP2.79□□□□□ -1.96
UPF3B-205ENST00000636792 A8MU10 97 aa2.78□□□□□ -1.96
UPF3B-205ENST00000636792 LCE3CQ5T5A8 94 aa2.78□□□□□ -1.96
UPF3B-205ENST00000636792 KRTAP12-2P59991 146 aa2.77□□□□□ -1.97
UPF3B-205ENST00000636792 CDC42SE1Q9NRR8 79 aa2.77□□□□□ -1.97
UPF3B-205ENST00000636792 LCE3AQ5TA76 89 aa2.76□□□□□ -1.97
UPF3B-205ENST00000636792 MACF1Q9UPN3 7388 aaKnown RBP2.75□□□□□ -1.97
UPF3B-205ENST00000636792 TNP1P09430 55 aa2.67□□□□□ -1.98
UPF3B-205ENST00000636792 KRTAP25-1Q3LHN0 102 aa2.65□□□□□ -1.99
UPF3B-205ENST00000636792 BRK1Q8WUW1 75 aa2.64□□□□□ -1.99
UPF3B-205ENST00000636792 C10orf95Q9H7T3 257 aa2.64□□□□□ -1.99
UPF3B-205ENST00000636792 A0A0A0MQY5 61 aa2.63□□□□□ -1.99
UPF3B-205ENST00000636792 KRTAP6-3Q3LI67 103 aa2.63□□□□□ -1.99
UPF3B-205ENST00000636792 ROMO1P60602 79 aa2.6□□□□□ -1.99
UPF3B-205ENST00000636792 KRTAP8-1Q8IUC2 63 aa2.6□□□□□ -1.99
UPF3B-205ENST00000636792 KMT2DO14686 5537 aa2.56□□□□□ -2
UPF3B-205ENST00000636792 PP632Q6XCG6 107 aa2.55□□□□□ -2
UPF3B-205ENST00000636792 PRO0628Q9UI54 55 aa2.54□□□□□ -2
UPF3B-205ENST00000636792 MUC12Q9UKN1 5478 aa2.53□□□□□ -2
UPF3B-205ENST00000636792 KRTAP2-3P0C7H8 128 aa2.52□□□□□ -2.01
UPF3B-205ENST00000636792 SPRR2FQ96RM1 72 aa2.52□□□□□ -2.01
UPF3B-205ENST00000636792 KRTAP2-4Q9BYR9 128 aa2.52□□□□□ -2.01
UPF3B-205ENST00000636792 LCE3EQ5T5B0 92 aa2.51□□□□□ -2.01
UPF3B-205ENST00000636792 PMAIP1Q13794 54 aa2.5□□□□□ -2.01
UPF3B-205ENST00000636792 KRTAP19-7Q3SYF9 63 aa2.5□□□□□ -2.01
UPF3B-205ENST00000636792 KRTAP5-5Q701N2 237 aaPredicted RBP2.49□□□□□ -2.01
UPF3B-205ENST00000636792 MT1EP04732 61 aa2.47□□□□□ -2.01
UPF3B-205ENST00000636792 KRTAP12-3P60328 96 aa2.46□□□□□ -2.02
UPF3B-205ENST00000636792 KRTAP19-5Q3LI72 72 aa2.46□□□□□ -2.02
UPF3B-205ENST00000636792 SPRR2EP22531 72 aa2.45□□□□□ -2.02
UPF3B-205ENST00000636792 SPRR2BP35325 72 aa2.45□□□□□ -2.02
UPF3B-205ENST00000636792 SPRR2AP35326 72 aa2.45□□□□□ -2.02
UPF3B-205ENST00000636792 LCE1CQ5T751 118 aa2.44□□□□□ -2.02
UPF3B-205ENST00000636792 LCE1BQ5T7P3 118 aa2.44□□□□□ -2.02
UPF3B-205ENST00000636792 MDN1Q9NU22 5596 aa2.43□□□□□ -2.02
UPF3B-205ENST00000636792 KRTAP5-8O75690 187 aa2.43□□□□□ -2.02
UPF3B-205ENST00000636792 KRTAP19-3Q7Z4W3 81 aa2.43□□□□□ -2.02
UPF3B-205ENST00000636792 MT1GP13640 62 aa2.41□□□□□ -2.02
UPF3B-205ENST00000636792 MT1LQ93083 61 aa2.39□□□□□ -2.03
UPF3B-205ENST00000636792 KRTAP2-1Q9BYU5 128 aa2.39□□□□□ -2.03
UPF3B-205ENST00000636792 KTN1-AS1Q86SY8 53 aa2.38□□□□□ -2.03
UPF3B-205ENST00000636792 AHNAK2Q8IVF2 5795 aa2.38□□□□□ -2.03
UPF3B-205ENST00000636792 SPRR2DP22532 72 aa2.37□□□□□ -2.03
UPF3B-205ENST00000636792 SPRR5A0A1B0GTR4 108 aa2.36□□□□□ -2.03
UPF3B-205ENST00000636792 MT1MQ8N339 61 aa2.34□□□□□ -2.03
UPF3B-205ENST00000636792 PRAC1Q96KF2 57 aa2.28□□□□□ -2.04
UPF3B-205ENST00000636792 DSTQ03001 7570 aaKnown RBP2.27□□□□□ -2.05
UPF3B-205ENST00000636792 NDUFAF8A1L188 74 aa2.26□□□□□ -2.05
UPF3B-205ENST00000636792 KRTAP5-7Q6L8G8 165 aa2.24□□□□□ -2.05
UPF3B-205ENST00000636792 KRTAP5-10Q6L8G5 202 aa2.21□□□□□ -2.06
UPF3B-205ENST00000636792 AHNAKQ09666 5890 aaKnown RBP2.2□□□□□ -2.06
UPF3B-205ENST00000636792 HMCN1Q96RW7 5635 aa2.11□□□□□ -2.07
UPF3B-205ENST00000636792 MUC5BQ9HC84 5762 aaPredicted RBP2.08□□□□□ -2.08
UPF3B-205ENST00000636792 MT1AP04731 61 aa2.07□□□□□ -2.08
UPF3B-205ENST00000636792 KRTAP12-4P60329 112 aa2.06□□□□□ -2.08
UPF3B-205ENST00000636792 MUC19Q7Z5P9 8384 aa2.02□□□□□ -2.09
UPF3B-205ENST00000636792 LUZP6Q538Z0 58 aa2.01□□□□□ -2.09
UPF3B-205ENST00000636792 MT4P47944 62 aa2□□□□□ -2.09
UPF3B-205ENST00000636792 KRTAP6-1Q3LI64 71 aa1.99□□□□□ -2.09
UPF3B-205ENST00000636792 KRTAP20-2Q3LI61 65 aa1.98□□□□□ -2.09
UPF3B-205ENST00000636792 MUC5ACP98088 5654 aa1.96□□□□□ -2.1
UPF3B-205ENST00000636792 SYNE1Q8NF91 8797 aaKnown RBP1.89□□□□□ -2.11
UPF3B-205ENST00000636792 LCE3DQ9BYE3 92 aa1.89□□□□□ -2.11
UPF3B-205ENST00000636792 KRTAP6-2Q3LI66 62 aa1.86□□□□□ -2.11
UPF3B-205ENST00000636792 KRTAP21-2Q3LI59 83 aa1.75□□□□□ -2.13
UPF3B-205ENST00000636792 INE1O15225 51 aa1.54□□□□□ -2.16
UPF3B-205ENST00000636792 PHGR1C9JFL3 82 aa1.35□□□□□ -2.19
UPF3B-205ENST00000636792 PRM1P04553 51 aa1.3□□□□□ -2.2
UPF3B-205ENST00000636792 KRTAP21-1Q3LI58 79 aa1.03□□□□□ -2.24
UPF3B-205ENST00000636792 MUC16Q8WXI7 14507 aa0.77□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 6.7 ms