RNA–Protein interactions for RNA: ENST00000636666.1

EPB41-213, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 5

Gene EPB41, Length 3,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-213ENST00000636666 OBSCNQ5VST9 7968 aa2.48□□□□□ -2.01
EPB41-213ENST00000636666 LCE1DQ5T752 114 aa2.48□□□□□ -2.01
EPB41-213ENST00000636666 LCE3CQ5T5A8 94 aa2.47□□□□□ -2.01
EPB41-213ENST00000636666 KRTAP4-9Q9BYQ8 210 aa2.44□□□□□ -2.02
EPB41-213ENST00000636666 KRTAP4-2Q9BYR5 136 aa2.44□□□□□ -2.02
EPB41-213ENST00000636666 SYNE1Q8NF91 8797 aaKnown RBP2.42□□□□□ -2.02
EPB41-213ENST00000636666 KRTAP9-3Q9BYQ3 159 aa2.42□□□□□ -2.02
EPB41-213ENST00000636666 DSTQ03001 7570 aaKnown RBP2.41□□□□□ -2.02
EPB41-213ENST00000636666 KRTAP5-3Q6L8H2 238 aa2.4□□□□□ -2.03
EPB41-213ENST00000636666 FCGBPQ9Y6R7 5405 aaPredicted RBP2.37□□□□□ -2.03
EPB41-213ENST00000636666 KRTAP9-6A8MVA2 160 aa2.34□□□□□ -2.03
EPB41-213ENST00000636666 KRTAP4-11Q9BYQ6 195 aa2.3□□□□□ -2.04
EPB41-213ENST00000636666 LCE4AQ5TA78 99 aa2.29□□□□□ -2.04
EPB41-213ENST00000636666 MT1GP13640 62 aa2.27□□□□□ -2.05
EPB41-213ENST00000636666 KRTAP4-3Q9BYR4 195 aa2.26□□□□□ -2.05
EPB41-213ENST00000636666 KRTAP19-7Q3SYF9 63 aa2.25□□□□□ -2.05
EPB41-213ENST00000636666 MUC12Q9UKN1 5478 aa2.25□□□□□ -2.05
EPB41-213ENST00000636666 KRTAP12-4P60329 112 aa2.24□□□□□ -2.05
EPB41-213ENST00000636666 MT1LQ93083 61 aa2.23□□□□□ -2.05
EPB41-213ENST00000636666 KRTAP9-7A8MTY7 169 aa2.21□□□□□ -2.06
EPB41-213ENST00000636666 MT1EP04732 61 aa2.21□□□□□ -2.06
EPB41-213ENST00000636666 KRTAP2-3P0C7H8 128 aa2.19□□□□□ -2.06
EPB41-213ENST00000636666 KRTAP2-4Q9BYR9 128 aa2.19□□□□□ -2.06
EPB41-213ENST00000636666 KRTAP2-1Q9BYU5 128 aa2.19□□□□□ -2.06
EPB41-213ENST00000636666 SPRR2FQ96RM1 72 aa2.16□□□□□ -2.06
EPB41-213ENST00000636666 SYNE2Q8WXH0 6885 aaKnown RBP2.14□□□□□ -2.07
EPB41-213ENST00000636666 SSPOA2VEC9 5147 aa2.13□□□□□ -2.07
EPB41-213ENST00000636666 MT1MQ8N339 61 aa2.08□□□□□ -2.08
EPB41-213ENST00000636666 KRTAP19-3Q7Z4W3 81 aa2.08□□□□□ -2.08
EPB41-213ENST00000636666 LCE5AQ5TCM9 118 aa2.07□□□□□ -2.08
EPB41-213ENST00000636666 KRTAP19-4Q3LI73 84 aa2.05□□□□□ -2.08
EPB41-213ENST00000636666 LCE3DQ9BYE3 92 aa2.02□□□□□ -2.09
EPB41-213ENST00000636666 PRM1P04553 51 aa1.99□□□□□ -2.09
EPB41-213ENST00000636666 KRTAP19-6Q3LI70 58 aa1.99□□□□□ -2.09
EPB41-213ENST00000636666 LCE3EQ5T5B0 92 aa1.98□□□□□ -2.09
EPB41-213ENST00000636666 MACF1Q9UPN3 7388 aaKnown RBP1.95□□□□□ -2.1
EPB41-213ENST00000636666 MDN1Q9NU22 5596 aa1.95□□□□□ -2.1
EPB41-213ENST00000636666 KRTAP6-1Q3LI64 71 aa1.95□□□□□ -2.1
EPB41-213ENST00000636666 SPRR2EP22531 72 aa1.89□□□□□ -2.11
EPB41-213ENST00000636666 SPRR2BP35325 72 aa1.89□□□□□ -2.11
EPB41-213ENST00000636666 SPRR2AP35326 72 aa1.89□□□□□ -2.11
EPB41-213ENST00000636666 MT1AP04731 61 aa1.85□□□□□ -2.11
EPB41-213ENST00000636666 KRTAP6-2Q3LI66 62 aa1.83□□□□□ -2.12
EPB41-213ENST00000636666 SPRR2DP22532 72 aa1.79□□□□□ -2.12
EPB41-213ENST00000636666 KRTAP5-5Q701N2 237 aaPredicted RBP1.78□□□□□ -2.13
EPB41-213ENST00000636666 LCE1AQ5T7P2 110 aa1.77□□□□□ -2.13
EPB41-213ENST00000636666 HMCN1Q96RW7 5635 aa1.75□□□□□ -2.13
EPB41-213ENST00000636666 MT3P25713 68 aa1.75□□□□□ -2.13
EPB41-213ENST00000636666 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.74□□□□□ -2.13
EPB41-213ENST00000636666 MUC19Q7Z5P9 8384 aa1.74□□□□□ -2.13
EPB41-213ENST00000636666 MT4P47944 62 aa1.7□□□□□ -2.14
EPB41-213ENST00000636666 GPR98Q8WXG9 6306 aa1.69□□□□□ -2.14
EPB41-213ENST00000636666 KRTAP2-2Q9BYT5 123 aa1.67□□□□□ -2.14
EPB41-213ENST00000636666 KRTAP6-3Q3LI67 103 aa1.63□□□□□ -2.15
EPB41-213ENST00000636666 LCE1BQ5T7P3 118 aa1.62□□□□□ -2.15
EPB41-213ENST00000636666 KRTAP5-9P26371 169 aa1.6□□□□□ -2.15
EPB41-213ENST00000636666 LCE1EQ5T753 118 aa1.54□□□□□ -2.16
EPB41-213ENST00000636666 MUC5BQ9HC84 5762 aaPredicted RBP1.54□□□□□ -2.16
EPB41-213ENST00000636666 KRTAP5-11Q6L8G4 156 aa1.53□□□□□ -2.17
EPB41-213ENST00000636666 KRTAP5-4Q6L8H1 288 aa1.48□□□□□ -2.17
EPB41-213ENST00000636666 MUC5ACP98088 5654 aa1.47□□□□□ -2.17
EPB41-213ENST00000636666 LCE1FQ5T754 118 aa1.46□□□□□ -2.18
EPB41-213ENST00000636666 KRTAP5-1Q6L8H4 278 aa1.45□□□□□ -2.18
EPB41-213ENST00000636666 NEBP20929 6669 aa1.44□□□□□ -2.18
EPB41-213ENST00000636666 KRTAP20-2Q3LI61 65 aa1.43□□□□□ -2.18
EPB41-213ENST00000636666 KRTAP4-4Q9BYR3 166 aa1.42□□□□□ -2.18
EPB41-213ENST00000636666 AHNAKQ09666 5890 aaKnown RBP1.38□□□□□ -2.19
EPB41-213ENST00000636666 KRTAP5-2Q701N4 177 aa1.34□□□□□ -2.2
EPB41-213ENST00000636666 KRTAP5-10Q6L8G5 202 aa1.3□□□□□ -2.2
EPB41-213ENST00000636666 KRTAP5-8O75690 187 aa1.29□□□□□ -2.2
EPB41-213ENST00000636666 KRTAP20-1Q3LI63 56 aa1.27□□□□□ -2.21
EPB41-213ENST00000636666 LCE1CQ5T751 118 aa1.16□□□□□ -2.22
EPB41-213ENST00000636666 AHNAK2Q8IVF2 5795 aa1.16□□□□□ -2.22
EPB41-213ENST00000636666 KRTAP5-7Q6L8G8 165 aa1.15□□□□□ -2.23
EPB41-213ENST00000636666 KRTAP21-2Q3LI59 83 aa1.14□□□□□ -2.23
EPB41-213ENST00000636666 KRTAP21-1Q3LI58 79 aa1.07□□□□□ -2.24
EPB41-213ENST00000636666 PHGR1C9JFL3 82 aa0.85□□□□□ -2.27
EPB41-213ENST00000636666 MUC16Q8WXI7 14507 aa0.65□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 11.1 ms