RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 KRTAP5-9P26371 169 aa5.93□□□□□ -1.46
CLN8-209ENST00000635970 KRTAP12-3P60328 96 aa5.93□□□□□ -1.46
CLN8-209ENST00000635970 MDN1Q9NU22 5596 aa5.86□□□□□ -1.47
CLN8-209ENST00000635970 SPRR2FQ96RM1 72 aa5.85□□□□□ -1.47
CLN8-209ENST00000635970 NEBP20929 6669 aa5.82□□□□□ -1.48
CLN8-209ENST00000635970 SPRR2EP22531 72 aa5.68□□□□□ -1.5
CLN8-209ENST00000635970 SPRR2BP35325 72 aa5.68□□□□□ -1.5
CLN8-209ENST00000635970 SPRR2AP35326 72 aa5.68□□□□□ -1.5
CLN8-209ENST00000635970 LCE1AQ5T7P2 110 aa5.65□□□□□ -1.51
CLN8-209ENST00000635970 KRTAP19-7Q3SYF9 63 aa5.63□□□□□ -1.51
CLN8-209ENST00000635970 LCE3CQ5T5A8 94 aa5.61□□□□□ -1.51
CLN8-209ENST00000635970 KRTAP19-5Q3LI72 72 aa5.57□□□□□ -1.52
CLN8-209ENST00000635970 MT1EP04732 61 aa5.56□□□□□ -1.52
CLN8-209ENST00000635970 KRTAP19-4Q3LI73 84 aa5.51□□□□□ -1.53
CLN8-209ENST00000635970 SPRR2DP22532 72 aa5.48□□□□□ -1.53
CLN8-209ENST00000635970 KRTAP20-1Q3LI63 56 aa5.47□□□□□ -1.53
CLN8-209ENST00000635970 KRTAP19-3Q7Z4W3 81 aa5.44□□□□□ -1.54
CLN8-209ENST00000635970 LCE5AQ5TCM9 118 aa5.41□□□□□ -1.54
CLN8-209ENST00000635970 KRTAP2-3P0C7H8 128 aa5.39□□□□□ -1.55
CLN8-209ENST00000635970 KRTAP2-4Q9BYR9 128 aa5.39□□□□□ -1.55
CLN8-209ENST00000635970 MT1LQ93083 61 aa5.36□□□□□ -1.55
CLN8-209ENST00000635970 KRTAP2-1Q9BYU5 128 aa5.34□□□□□ -1.55
CLN8-209ENST00000635970 MT1GP13640 62 aa5.31□□□□□ -1.56
CLN8-209ENST00000635970 LCE3BQ5TA77 95 aa5.31□□□□□ -1.56
CLN8-209ENST00000635970 KRTAP9-6A8MVA2 160 aa5.3□□□□□ -1.56
CLN8-209ENST00000635970 DSTQ03001 7570 aaKnown RBP5.29□□□□□ -1.56
CLN8-209ENST00000635970 MT1MQ8N339 61 aa5.27□□□□□ -1.57
CLN8-209ENST00000635970 KRTAP2-2Q9BYT5 123 aa5.24□□□□□ -1.57
CLN8-209ENST00000635970 KRTAP4-3Q9BYR4 195 aa5.18□□□□□ -1.58
CLN8-209ENST00000635970 KRTAP4-7Q9BYR0 210 aa5.17□□□□□ -1.58
CLN8-209ENST00000635970 LCE4AQ5TA78 99 aa4.98□□□□□ -1.61
CLN8-209ENST00000635970 LOC100996750A0A140TA64 210 aa4.97□□□□□ -1.61
CLN8-209ENST00000635970 KRTAP4-6Q9BYQ5 205 aa4.97□□□□□ -1.61
CLN8-209ENST00000635970 KRTAP4-9Q9BYQ8 210 aa4.89□□□□□ -1.63
CLN8-209ENST00000635970 KRTAP4-12Q9BQ66 201 aa4.85□□□□□ -1.63
CLN8-209ENST00000635970 KRTAP5-4Q6L8H1 288 aa4.82□□□□□ -1.64
CLN8-209ENST00000635970 LCE1DQ5T752 114 aa4.8□□□□□ -1.64
CLN8-209ENST00000635970 KRTAP5-5Q701N2 237 aaPredicted RBP4.8□□□□□ -1.64
CLN8-209ENST00000635970 MT4P47944 62 aa4.8□□□□□ -1.64
CLN8-209ENST00000635970 KRTAP9-4Q9BYQ2 154 aa4.78□□□□□ -1.64
CLN8-209ENST00000635970 KRTAP9-9Q9BYP9 154 aa4.77□□□□□ -1.65
CLN8-209ENST00000635970 HMCN1Q96RW7 5635 aa4.75□□□□□ -1.65
CLN8-209ENST00000635970 KRTAP12-4P60329 112 aa4.71□□□□□ -1.66
CLN8-209ENST00000635970 SYNE1Q8NF91 8797 aaKnown RBP4.61□□□□□ -1.67
CLN8-209ENST00000635970 MT1AP04731 61 aa4.56□□□□□ -1.68
CLN8-209ENST00000635970 KRTAP20-2Q3LI61 65 aa4.54□□□□□ -1.68
CLN8-209ENST00000635970 KRTAP6-1Q3LI64 71 aa4.54□□□□□ -1.68
CLN8-209ENST00000635970 AHNAK2Q8IVF2 5795 aa4.44□□□□□ -1.7
CLN8-209ENST00000635970 GPR98Q8WXG9 6306 aa4.44□□□□□ -1.7
CLN8-209ENST00000635970 KRTAP5-3Q6L8H2 238 aa4.4□□□□□ -1.71
CLN8-209ENST00000635970 LCE3DQ9BYE3 92 aa4.36□□□□□ -1.71
CLN8-209ENST00000635970 LCE3EQ5T5B0 92 aa4.34□□□□□ -1.71
CLN8-209ENST00000635970 KRTAP5-10Q6L8G5 202 aa4.29□□□□□ -1.72
CLN8-209ENST00000635970 KRTAP5-2Q701N4 177 aa4.28□□□□□ -1.72
CLN8-209ENST00000635970 KRTAP6-2Q3LI66 62 aa4.27□□□□□ -1.73
CLN8-209ENST00000635970 PRM1P04553 51 aa4.16□□□□□ -1.74
CLN8-209ENST00000635970 MT3P25713 68 aa4.13□□□□□ -1.75
CLN8-209ENST00000635970 KRTAP4-11Q9BYQ6 195 aa4.09□□□□□ -1.76
CLN8-209ENST00000635970 OBSCNQ5VST9 7968 aa4.07□□□□□ -1.76
CLN8-209ENST00000635970 KRTAP5-7Q6L8G8 165 aa4.05□□□□□ -1.76
CLN8-209ENST00000635970 KRTAP4-2Q9BYR5 136 aa3.94□□□□□ -1.78
CLN8-209ENST00000635970 KRTAP5-8O75690 187 aa3.93□□□□□ -1.78
CLN8-209ENST00000635970 KRTAP5-1Q6L8H4 278 aa3.8□□□□□ -1.8
CLN8-209ENST00000635970 MUC5ACP98088 5654 aa3.71□□□□□ -1.82
CLN8-209ENST00000635970 LCE1EQ5T753 118 aa3.7□□□□□ -1.82
CLN8-209ENST00000635970 LCE1FQ5T754 118 aa3.68□□□□□ -1.82
CLN8-209ENST00000635970 MUC5BQ9HC84 5762 aaPredicted RBP3.62□□□□□ -1.83
CLN8-209ENST00000635970 LCE1BQ5T7P3 118 aa3.52□□□□□ -1.85
CLN8-209ENST00000635970 AHNAKQ09666 5890 aaKnown RBP3.52□□□□□ -1.85
CLN8-209ENST00000635970 LCE1CQ5T751 118 aa3.45□□□□□ -1.86
CLN8-209ENST00000635970 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.18□□□□□ -1.9
CLN8-209ENST00000635970 KRTAP5-11Q6L8G4 156 aa3.1□□□□□ -1.91
CLN8-209ENST00000635970 KRTAP21-2Q3LI59 83 aa2.98□□□□□ -1.93
CLN8-209ENST00000635970 KRTAP21-1Q3LI58 79 aa2.72□□□□□ -1.97
CLN8-209ENST00000635970 KRTAP4-4Q9BYR3 166 aa2.72□□□□□ -1.97
CLN8-209ENST00000635970 PHGR1C9JFL3 82 aa2.67□□□□□ -1.98
CLN8-209ENST00000635970 MUC19Q7Z5P9 8384 aa2.46□□□□□ -2.01
CLN8-209ENST00000635970 MUC16Q8WXI7 14507 aa1.74□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 11.3 ms