RNA–Protein interactions for RNA: ENST00000635915.1

CLN5-206, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 5

Gene CLN5, Length 2,517 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-206ENST00000635915 CRCT1Q9UGL9 99 aa6.23□□□□□ -1.41
CLN5-206ENST00000635915 KRTAP9-6A8MVA2 160 aa6.19□□□□□ -1.42
CLN5-206ENST00000635915 SPRR2FQ96RM1 72 aa6.16□□□□□ -1.42
CLN5-206ENST00000635915 SYNE2Q8WXH0 6885 aaKnown RBP6.12□□□□□ -1.43
CLN5-206ENST00000635915 KRTAP19-3Q7Z4W3 81 aa6.1□□□□□ -1.43
CLN5-206ENST00000635915 KRTAP19-4Q3LI73 84 aa6.09□□□□□ -1.43
CLN5-206ENST00000635915 KRTAP4-3Q9BYR4 195 aa6.08□□□□□ -1.44
CLN5-206ENST00000635915 MT1MQ8N339 61 aa6.03□□□□□ -1.44
CLN5-206ENST00000635915 MT1GP13640 62 aa6.02□□□□□ -1.45
CLN5-206ENST00000635915 MDN1Q9NU22 5596 aa6.01□□□□□ -1.45
CLN5-206ENST00000635915 LCE5AQ5TCM9 118 aa5.96□□□□□ -1.46
CLN5-206ENST00000635915 DSTQ03001 7570 aaKnown RBP5.95□□□□□ -1.46
CLN5-206ENST00000635915 LOC100996750A0A140TA64 210 aa5.93□□□□□ -1.46
CLN5-206ENST00000635915 KRTAP5-9P26371 169 aa5.88□□□□□ -1.47
CLN5-206ENST00000635915 LCE1AQ5T7P2 110 aa5.81□□□□□ -1.48
CLN5-206ENST00000635915 KRTAP9-6A0A140TA67 174 aa5.77□□□□□ -1.49
CLN5-206ENST00000635915 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.76□□□□□ -1.49
CLN5-206ENST00000635915 SPRR2EP22531 72 aa5.74□□□□□ -1.49
CLN5-206ENST00000635915 SPRR2BP35325 72 aa5.74□□□□□ -1.49
CLN5-206ENST00000635915 SPRR2AP35326 72 aa5.74□□□□□ -1.49
CLN5-206ENST00000635915 KRTAP2-3P0C7H8 128 aa5.72□□□□□ -1.49
CLN5-206ENST00000635915 KRTAP2-4Q9BYR9 128 aa5.72□□□□□ -1.49
CLN5-206ENST00000635915 KRTAP2-1Q9BYU5 128 aa5.72□□□□□ -1.49
CLN5-206ENST00000635915 INE1O15225 51 aa5.67□□□□□ -1.5
CLN5-206ENST00000635915 KRTAP6-3Q3LI67 103 aa5.63□□□□□ -1.51
CLN5-206ENST00000635915 SPRR2DP22532 72 aa5.5□□□□□ -1.53
CLN5-206ENST00000635915 KRTAP6-1Q3LI64 71 aa5.39□□□□□ -1.55
CLN5-206ENST00000635915 KRTAP5-5Q701N2 237 aaPredicted RBP5.38□□□□□ -1.55
CLN5-206ENST00000635915 KRTAP9-7A8MTY7 169 aa5.34□□□□□ -1.55
CLN5-206ENST00000635915 LCE3BQ5TA77 95 aa5.34□□□□□ -1.56
CLN5-206ENST00000635915 SYNE1Q8NF91 8797 aaKnown RBP5.33□□□□□ -1.56
CLN5-206ENST00000635915 MT1AP04731 61 aa5.33□□□□□ -1.56
CLN5-206ENST00000635915 NEBP20929 6669 aa5.29□□□□□ -1.56
CLN5-206ENST00000635915 KRTAP4-9Q9BYQ8 210 aa5.17□□□□□ -1.58
CLN5-206ENST00000635915 KRTAP9-4Q9BYQ2 154 aa5.05□□□□□ -1.6
CLN5-206ENST00000635915 KRTAP12-4P60329 112 aa5□□□□□ -1.61
CLN5-206ENST00000635915 KRTAP5-4Q6L8H1 288 aa4.97□□□□□ -1.61
CLN5-206ENST00000635915 KRTAP6-2Q3LI66 62 aa4.92□□□□□ -1.62
CLN5-206ENST00000635915 MT4P47944 62 aa4.86□□□□□ -1.63
CLN5-206ENST00000635915 LCE3DQ9BYE3 92 aa4.86□□□□□ -1.63
CLN5-206ENST00000635915 KRTAP4-6Q9BYQ5 205 aa4.86□□□□□ -1.63
CLN5-206ENST00000635915 OBSCNQ5VST9 7968 aa4.86□□□□□ -1.63
CLN5-206ENST00000635915 MT3P25713 68 aa4.8□□□□□ -1.64
CLN5-206ENST00000635915 KRTAP2-2Q9BYT5 123 aa4.79□□□□□ -1.64
CLN5-206ENST00000635915 LCE4AQ5TA78 99 aa4.77□□□□□ -1.65
CLN5-206ENST00000635915 HMCN1Q96RW7 5635 aa4.74□□□□□ -1.65
CLN5-206ENST00000635915 LCE3EQ5T5B0 92 aa4.74□□□□□ -1.65
CLN5-206ENST00000635915 KRTAP20-1Q3LI63 56 aa4.72□□□□□ -1.65
CLN5-206ENST00000635915 KRTAP20-2Q3LI61 65 aa4.69□□□□□ -1.66
CLN5-206ENST00000635915 LCE1DQ5T752 114 aa4.68□□□□□ -1.66
CLN5-206ENST00000635915 KRTAP5-2Q701N4 177 aa4.56□□□□□ -1.68
CLN5-206ENST00000635915 KRTAP5-3Q6L8H2 238 aa4.49□□□□□ -1.69
CLN5-206ENST00000635915 PRM1P04553 51 aa4.41□□□□□ -1.7
CLN5-206ENST00000635915 KRTAP4-12Q9BQ66 201 aa4.07□□□□□ -1.76
CLN5-206ENST00000635915 MUC5ACP98088 5654 aa4.05□□□□□ -1.76
CLN5-206ENST00000635915 LCE1EQ5T753 118 aa4.04□□□□□ -1.76
CLN5-206ENST00000635915 KRTAP4-11Q9BYQ6 195 aa4□□□□□ -1.77
CLN5-206ENST00000635915 AHNAK2Q8IVF2 5795 aa4□□□□□ -1.77
CLN5-206ENST00000635915 LCE1BQ5T7P3 118 aa3.99□□□□□ -1.77
CLN5-206ENST00000635915 KRTAP5-1Q6L8H4 278 aa3.95□□□□□ -1.78
CLN5-206ENST00000635915 KRTAP9-9Q9BYP9 154 aa3.88□□□□□ -1.79
CLN5-206ENST00000635915 KRTAP4-2Q9BYR5 136 aa3.87□□□□□ -1.79
CLN5-206ENST00000635915 KRTAP5-10Q6L8G5 202 aa3.86□□□□□ -1.79
CLN5-206ENST00000635915 KRTAP5-8O75690 187 aa3.84□□□□□ -1.79
CLN5-206ENST00000635915 LCE1CQ5T751 118 aa3.81□□□□□ -1.8
CLN5-206ENST00000635915 KRTAP5-7Q6L8G8 165 aa3.68□□□□□ -1.82
CLN5-206ENST00000635915 GPR98Q8WXG9 6306 aa3.63□□□□□ -1.83
CLN5-206ENST00000635915 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.55□□□□□ -1.84
CLN5-206ENST00000635915 MUC5BQ9HC84 5762 aaPredicted RBP3.49□□□□□ -1.85
CLN5-206ENST00000635915 KRTAP21-2Q3LI59 83 aa3.49□□□□□ -1.85
CLN5-206ENST00000635915 KRTAP5-11Q6L8G4 156 aa3.33□□□□□ -1.88
CLN5-206ENST00000635915 KRTAP4-4Q9BYR3 166 aa3.23□□□□□ -1.89
CLN5-206ENST00000635915 AHNAKQ09666 5890 aaKnown RBP2.94□□□□□ -1.94
CLN5-206ENST00000635915 MUC19Q7Z5P9 8384 aa2.91□□□□□ -1.94
CLN5-206ENST00000635915 PHGR1C9JFL3 82 aa2.88□□□□□ -1.95
CLN5-206ENST00000635915 LCE1FQ5T754 118 aa2.84□□□□□ -1.95
CLN5-206ENST00000635915 KRTAP21-1Q3LI58 79 aa2.68□□□□□ -1.98
CLN5-206ENST00000635915 MUC16Q8WXI7 14507 aa1.86□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 49 ms