RNA–Protein interactions for RNA: ENST00000635856.1

CHD2-221, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-221ENST00000635856 MACF1Q9UPN3 7388 aaKnown RBP2□□□□□ -2.09
CHD2-221ENST00000635856 KRTAP4-8A0A0G2JLE6 195 aa1.99□□□□□ -2.09
CHD2-221ENST00000635856 MT1XP80297 61 aa1.99□□□□□ -2.09
CHD2-221ENST00000635856 KRTAP9-6A8MVA2 160 aa1.99□□□□□ -2.09
CHD2-221ENST00000635856 LCE2BO14633 110 aa1.98□□□□□ -2.09
CHD2-221ENST00000635856 CRCT1Q9UGL9 99 aa1.97□□□□□ -2.09
CHD2-221ENST00000635856 FCGBPQ9Y6R7 5405 aaPredicted RBP1.96□□□□□ -2.09
CHD2-221ENST00000635856 PRM1P04553 51 aa1.96□□□□□ -2.09
CHD2-221ENST00000635856 KRTAP4-7Q9BYR0 210 aa1.96□□□□□ -2.09
CHD2-221ENST00000635856 KRTAP6-3Q3LI67 103 aa1.96□□□□□ -2.1
CHD2-221ENST00000635856 MT1BP07438 61 aa1.96□□□□□ -2.1
CHD2-221ENST00000635856 KMT2DO14686 5537 aa1.94□□□□□ -2.1
CHD2-221ENST00000635856 KRTAP9-9Q9BYP9 154 aa1.93□□□□□ -2.1
CHD2-221ENST00000635856 KRTAP9-4Q9BYQ2 154 aa1.93□□□□□ -2.1
CHD2-221ENST00000635856 KRTAP4-12Q9BQ66 201 aa1.93□□□□□ -2.1
CHD2-221ENST00000635856 DSTQ03001 7570 aaKnown RBP1.91□□□□□ -2.1
CHD2-221ENST00000635856 SPRR2FQ96RM1 72 aa1.91□□□□□ -2.1
CHD2-221ENST00000635856 MUC12Q9UKN1 5478 aa1.91□□□□□ -2.1
CHD2-221ENST00000635856 KRTAP19-6Q3LI70 58 aa1.91□□□□□ -2.1
CHD2-221ENST00000635856 LCE1EQ5T753 118 aa1.91□□□□□ -2.1
CHD2-221ENST00000635856 LCE3BQ5TA77 95 aa1.9□□□□□ -2.11
CHD2-221ENST00000635856 LCE3EQ5T5B0 92 aa1.89□□□□□ -2.11
CHD2-221ENST00000635856 LCE3DQ9BYE3 92 aa1.87□□□□□ -2.11
CHD2-221ENST00000635856 KRTAP4-9Q9BYQ8 210 aa1.87□□□□□ -2.11
CHD2-221ENST00000635856 MDN1Q9NU22 5596 aa1.87□□□□□ -2.11
CHD2-221ENST00000635856 KRTAP4-2Q9BYR5 136 aa1.86□□□□□ -2.11
CHD2-221ENST00000635856 LCE1DQ5T752 114 aa1.85□□□□□ -2.11
CHD2-221ENST00000635856 KRTAP5-3Q6L8H2 238 aa1.85□□□□□ -2.11
CHD2-221ENST00000635856 KRTAP9-7A8MTY7 169 aa1.84□□□□□ -2.12
CHD2-221ENST00000635856 OBSCNQ5VST9 7968 aa1.83□□□□□ -2.12
CHD2-221ENST00000635856 SPRR2EP22531 72 aa1.83□□□□□ -2.12
CHD2-221ENST00000635856 SPRR2BP35325 72 aa1.83□□□□□ -2.12
CHD2-221ENST00000635856 SPRR2AP35326 72 aa1.83□□□□□ -2.12
CHD2-221ENST00000635856 SYNE1Q8NF91 8797 aaKnown RBP1.81□□□□□ -2.12
CHD2-221ENST00000635856 MT1LQ93083 61 aa1.81□□□□□ -2.12
CHD2-221ENST00000635856 MT1GP13640 62 aa1.78□□□□□ -2.12
CHD2-221ENST00000635856 MT1EP04732 61 aa1.78□□□□□ -2.12
CHD2-221ENST00000635856 SPRR2DP22532 72 aa1.78□□□□□ -2.12
CHD2-221ENST00000635856 MT1AP04731 61 aa1.77□□□□□ -2.13
CHD2-221ENST00000635856 MT3P25713 68 aa1.77□□□□□ -2.13
CHD2-221ENST00000635856 LCE1FQ5T754 118 aa1.76□□□□□ -2.13
CHD2-221ENST00000635856 LCE5AQ5TCM9 118 aa1.75□□□□□ -2.13
CHD2-221ENST00000635856 KRTAP19-3Q7Z4W3 81 aa1.74□□□□□ -2.13
CHD2-221ENST00000635856 KRTAP19-7Q3SYF9 63 aa1.74□□□□□ -2.13
CHD2-221ENST00000635856 MUC19Q7Z5P9 8384 aa1.73□□□□□ -2.13
CHD2-221ENST00000635856 KRTAP4-11Q9BYQ6 195 aa1.72□□□□□ -2.13
CHD2-221ENST00000635856 KRTAP6-2Q3LI66 62 aa1.71□□□□□ -2.14
CHD2-221ENST00000635856 KRTAP20-1Q3LI63 56 aa1.69□□□□□ -2.14
CHD2-221ENST00000635856 KRTAP5-5Q701N2 237 aaPredicted RBP1.69□□□□□ -2.14
CHD2-221ENST00000635856 NEBP20929 6669 aa1.65□□□□□ -2.14
CHD2-221ENST00000635856 MT1MQ8N339 61 aa1.65□□□□□ -2.15
CHD2-221ENST00000635856 KRTAP4-3Q9BYR4 195 aa1.63□□□□□ -2.15
CHD2-221ENST00000635856 GPR98Q8WXG9 6306 aa1.61□□□□□ -2.15
CHD2-221ENST00000635856 KRTAP5-9P26371 169 aa1.6□□□□□ -2.15
CHD2-221ENST00000635856 LCE4AQ5TA78 99 aa1.53□□□□□ -2.16
CHD2-221ENST00000635856 KRTAP6-1Q3LI64 71 aa1.51□□□□□ -2.17
CHD2-221ENST00000635856 MT4P47944 62 aa1.51□□□□□ -2.17
CHD2-221ENST00000635856 HMCN1Q96RW7 5635 aa1.43□□□□□ -2.18
CHD2-221ENST00000635856 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.42□□□□□ -2.18
CHD2-221ENST00000635856 LCE1BQ5T7P3 118 aa1.38□□□□□ -2.19
CHD2-221ENST00000635856 AHNAK2Q8IVF2 5795 aa1.32□□□□□ -2.2
CHD2-221ENST00000635856 KRTAP20-2Q3LI61 65 aa1.31□□□□□ -2.2
CHD2-221ENST00000635856 KRTAP5-4Q6L8H1 288 aa1.3□□□□□ -2.2
CHD2-221ENST00000635856 LCE1CQ5T751 118 aa1.28□□□□□ -2.2
CHD2-221ENST00000635856 MUC5BQ9HC84 5762 aaPredicted RBP1.22□□□□□ -2.21
CHD2-221ENST00000635856 MUC5ACP98088 5654 aa1.22□□□□□ -2.21
CHD2-221ENST00000635856 KRTAP21-1Q3LI58 79 aa1.18□□□□□ -2.22
CHD2-221ENST00000635856 KRTAP5-10Q6L8G5 202 aa1.18□□□□□ -2.22
CHD2-221ENST00000635856 KRTAP5-2Q701N4 177 aa1.14□□□□□ -2.23
CHD2-221ENST00000635856 KRTAP5-11Q6L8G4 156 aa1.13□□□□□ -2.23
CHD2-221ENST00000635856 AHNAKQ09666 5890 aaKnown RBP1.1□□□□□ -2.23
CHD2-221ENST00000635856 KRTAP5-8O75690 187 aa1.1□□□□□ -2.23
CHD2-221ENST00000635856 KRTAP4-4Q9BYR3 166 aa1.08□□□□□ -2.24
CHD2-221ENST00000635856 KRTAP5-7Q6L8G8 165 aa1.07□□□□□ -2.24
CHD2-221ENST00000635856 KRTAP5-1Q6L8H4 278 aa1.07□□□□□ -2.24
CHD2-221ENST00000635856 KRTAP21-2Q3LI59 83 aa0.89□□□□□ -2.27
CHD2-221ENST00000635856 PHGR1C9JFL3 82 aa0.86□□□□□ -2.27
CHD2-221ENST00000635856 MUC16Q8WXI7 14507 aa0.61□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 117.8 ms