RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 KRTAP19-5Q3LI72 72 aa3.19□□□□□ -1.9
CDKL5-209ENST00000635828 TNP1P09430 55 aa3.18□□□□□ -1.9
CDKL5-209ENST00000635828 LCE1AQ5T7P2 110 aa3.18□□□□□ -1.9
CDKL5-209ENST00000635828 SPRR2EP22531 72 aa3.17□□□□□ -1.9
CDKL5-209ENST00000635828 SPRR2BP35325 72 aa3.17□□□□□ -1.9
CDKL5-209ENST00000635828 SPRR2AP35326 72 aa3.17□□□□□ -1.9
CDKL5-209ENST00000635828 MT1EP04732 61 aa3.14□□□□□ -1.91
CDKL5-209ENST00000635828 KRTAP4-7Q9BYR0 210 aa3.06□□□□□ -1.92
CDKL5-209ENST00000635828 KRTAP15-1Q3LI76 137 aa3.05□□□□□ -1.92
CDKL5-209ENST00000635828 KRTAP19-3Q7Z4W3 81 aa3.05□□□□□ -1.92
CDKL5-209ENST00000635828 LCE5AQ5TCM9 118 aa3.05□□□□□ -1.92
CDKL5-209ENST00000635828 KRTAP4-3Q9BYR4 195 aa3.05□□□□□ -1.92
CDKL5-209ENST00000635828 SPRR2DP22532 72 aa3.04□□□□□ -1.92
CDKL5-209ENST00000635828 KRTAP12-3P60328 96 aa3.04□□□□□ -1.92
CDKL5-209ENST00000635828 MT1LQ93083 61 aa3.04□□□□□ -1.92
CDKL5-209ENST00000635828 OBSCNQ5VST9 7968 aa3□□□□□ -1.93
CDKL5-209ENST00000635828 KRTAP20-1Q3LI63 56 aa2.99□□□□□ -1.93
CDKL5-209ENST00000635828 MT1MQ8N339 61 aa2.98□□□□□ -1.93
CDKL5-209ENST00000635828 MT1GP13640 62 aa2.96□□□□□ -1.94
CDKL5-209ENST00000635828 LCE3BQ5TA77 95 aa2.96□□□□□ -1.94
CDKL5-209ENST00000635828 KRTAP2-3P0C7H8 128 aa2.94□□□□□ -1.94
CDKL5-209ENST00000635828 KRTAP2-4Q9BYR9 128 aa2.94□□□□□ -1.94
CDKL5-209ENST00000635828 LOC100996750A0A140TA64 210 aa2.88□□□□□ -1.95
CDKL5-209ENST00000635828 PP632Q6XCG6 107 aa2.88□□□□□ -1.95
CDKL5-209ENST00000635828 KRTAP2-2Q9BYT5 123 aa2.87□□□□□ -1.95
CDKL5-209ENST00000635828 KRTAP2-1Q9BYU5 128 aa2.87□□□□□ -1.95
CDKL5-209ENST00000635828 SYNE1Q8NF91 8797 aaKnown RBP2.86□□□□□ -1.95
CDKL5-209ENST00000635828 LCE3CQ5T5A8 94 aa2.83□□□□□ -1.96
CDKL5-209ENST00000635828 KRTAP4-9Q9BYQ8 210 aa2.81□□□□□ -1.96
CDKL5-209ENST00000635828 KRTAP9-6A8MVA2 160 aa2.79□□□□□ -1.96
CDKL5-209ENST00000635828 HMCN1Q96RW7 5635 aa2.75□□□□□ -1.97
CDKL5-209ENST00000635828 MT4P47944 62 aa2.73□□□□□ -1.97
CDKL5-209ENST00000635828 INE1O15225 51 aa2.72□□□□□ -1.97
CDKL5-209ENST00000635828 KRTAP5-5Q701N2 237 aaPredicted RBP2.72□□□□□ -1.97
CDKL5-209ENST00000635828 LCE1DQ5T752 114 aa2.7□□□□□ -1.98
CDKL5-209ENST00000635828 KRTAP4-6Q9BYQ5 205 aa2.7□□□□□ -1.98
CDKL5-209ENST00000635828 KRTAP5-4Q6L8H1 288 aa2.68□□□□□ -1.98
CDKL5-209ENST00000635828 KRTAP19-4Q3LI73 84 aa2.63□□□□□ -1.99
CDKL5-209ENST00000635828 KRTAP6-1Q3LI64 71 aa2.62□□□□□ -1.99
CDKL5-209ENST00000635828 LCE4AQ5TA78 99 aa2.61□□□□□ -1.99
CDKL5-209ENST00000635828 KRTAP20-2Q3LI61 65 aa2.54□□□□□ -2
CDKL5-209ENST00000635828 MT1AP04731 61 aa2.54□□□□□ -2
CDKL5-209ENST00000635828 SPRR5A0A1B0GTR4 108 aa2.52□□□□□ -2.01
CDKL5-209ENST00000635828 KRTAP12-4P60329 112 aa2.5□□□□□ -2.01
CDKL5-209ENST00000635828 AHNAK2Q8IVF2 5795 aa2.49□□□□□ -2.01
CDKL5-209ENST00000635828 KRTAP5-3Q6L8H2 238 aa2.47□□□□□ -2.01
CDKL5-209ENST00000635828 KRTAP9-4Q9BYQ2 154 aa2.45□□□□□ -2.02
CDKL5-209ENST00000635828 KRTAP6-2Q3LI66 62 aa2.45□□□□□ -2.02
CDKL5-209ENST00000635828 GPR98Q8WXG9 6306 aa2.4□□□□□ -2.03
CDKL5-209ENST00000635828 KRTAP5-2Q701N4 177 aa2.38□□□□□ -2.03
CDKL5-209ENST00000635828 KRTAP5-10Q6L8G5 202 aa2.37□□□□□ -2.03
CDKL5-209ENST00000635828 LCE1FQ5T754 118 aa2.33□□□□□ -2.04
CDKL5-209ENST00000635828 KRTAP9-9Q9BYP9 154 aa2.3□□□□□ -2.04
CDKL5-209ENST00000635828 MT3P25713 68 aa2.29□□□□□ -2.04
CDKL5-209ENST00000635828 KRTAP4-11Q9BYQ6 195 aa2.27□□□□□ -2.05
CDKL5-209ENST00000635828 KRTAP5-8O75690 187 aa2.2□□□□□ -2.06
CDKL5-209ENST00000635828 KRTAP5-7Q6L8G8 165 aa2.18□□□□□ -2.06
CDKL5-209ENST00000635828 LCE1EQ5T753 118 aa2.15□□□□□ -2.07
CDKL5-209ENST00000635828 KRTAP5-1Q6L8H4 278 aa2.15□□□□□ -2.07
CDKL5-209ENST00000635828 MUC5ACP98088 5654 aa2.12□□□□□ -2.07
CDKL5-209ENST00000635828 MUC19Q7Z5P9 8384 aa2.1□□□□□ -2.07
CDKL5-209ENST00000635828 MUC5BQ9HC84 5762 aaPredicted RBP2.08□□□□□ -2.08
CDKL5-209ENST00000635828 LCE3DQ9BYE3 92 aa2.06□□□□□ -2.08
CDKL5-209ENST00000635828 LCE1BQ5T7P3 118 aa2.03□□□□□ -2.08
CDKL5-209ENST00000635828 LCE3EQ5T5B0 92 aa2□□□□□ -2.09
CDKL5-209ENST00000635828 KRTAP4-2Q9BYR5 136 aa1.99□□□□□ -2.09
CDKL5-209ENST00000635828 LCE1CQ5T751 118 aa1.91□□□□□ -2.1
CDKL5-209ENST00000635828 AHNAKQ09666 5890 aaKnown RBP1.89□□□□□ -2.11
CDKL5-209ENST00000635828 PRM1P04553 51 aa1.84□□□□□ -2.11
CDKL5-209ENST00000635828 KRTAP4-12Q9BQ66 201 aa1.81□□□□□ -2.12
CDKL5-209ENST00000635828 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.74□□□□□ -2.13
CDKL5-209ENST00000635828 KRTAP21-2Q3LI59 83 aa1.7□□□□□ -2.14
CDKL5-209ENST00000635828 KRTAP5-11Q6L8G4 156 aa1.7□□□□□ -2.14
CDKL5-209ENST00000635828 KRTAP4-4Q9BYR3 166 aa1.63□□□□□ -2.15
CDKL5-209ENST00000635828 PHGR1C9JFL3 82 aa1.49□□□□□ -2.17
CDKL5-209ENST00000635828 KRTAP21-1Q3LI58 79 aa1.05□□□□□ -2.24
CDKL5-209ENST00000635828 MUC16Q8WXI7 14507 aa0.94□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 11.2 ms