RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 TNP1P09430 55 aa5.81□□□□□ -1.48
LINC00339-207ENST00000634712 C10orf95Q9H7T3 257 aa5.8□□□□□ -1.48
LINC00339-207ENST00000634712 KRTAP19-5Q3LI72 72 aa5.78□□□□□ -1.48
LINC00339-207ENST00000634712 KRTAP19-3Q7Z4W3 81 aa5.77□□□□□ -1.49
LINC00339-207ENST00000634712 LCE5AQ5TCM9 118 aa5.75□□□□□ -1.49
LINC00339-207ENST00000634712 V9GYY9 64 aa5.73□□□□□ -1.49
LINC00339-207ENST00000634712 MIR22HGQ0VDD5 57 aa5.72□□□□□ -1.49
LINC00339-207ENST00000634712 LCE3AQ5TA76 89 aa5.69□□□□□ -1.5
LINC00339-207ENST00000634712 KRTAP4-11Q9BYQ6 195 aa5.69□□□□□ -1.5
LINC00339-207ENST00000634712 PSPHP1O15172 72 aa5.67□□□□□ -1.5
LINC00339-207ENST00000634712 MT1GP13640 62 aa5.67□□□□□ -1.5
LINC00339-207ENST00000634712 K7ERS5 55 aa5.66□□□□□ -1.5
LINC00339-207ENST00000634712 Q1T7F1 81 aa5.65□□□□□ -1.51
LINC00339-207ENST00000634712 PP632Q6XCG6 107 aa5.65□□□□□ -1.51
LINC00339-207ENST00000634712 DSTQ03001 7570 aaKnown RBP5.63□□□□□ -1.51
LINC00339-207ENST00000634712 LCE4AQ5TA78 99 aa5.62□□□□□ -1.51
LINC00339-207ENST00000634712 MT1LQ93083 61 aa5.58□□□□□ -1.52
LINC00339-207ENST00000634712 MT1MQ8N339 61 aa5.54□□□□□ -1.52
LINC00339-207ENST00000634712 KRTAP25-1Q3LHN0 102 aa5.52□□□□□ -1.53
LINC00339-207ENST00000634712 A6NED7 52 aa5.5□□□□□ -1.53
LINC00339-207ENST00000634712 KRTAP12-3P60328 96 aa5.5□□□□□ -1.53
LINC00339-207ENST00000634712 KRTAP23-1A1A580 65 aa5.45□□□□□ -1.54
LINC00339-207ENST00000634712 PCP4P48539 62 aa5.44□□□□□ -1.54
LINC00339-207ENST00000634712 RPS28P62857 69 aaKnown RBP5.42□□□□□ -1.54
LINC00339-207ENST00000634712 KRTAP4-3Q9BYR4 195 aa5.4□□□□□ -1.55
LINC00339-207ENST00000634712 KRTAP5-3Q6L8H2 238 aa5.33□□□□□ -1.56
LINC00339-207ENST00000634712 CDC42SE1Q9NRR8 79 aa5.33□□□□□ -1.56
LINC00339-207ENST00000634712 MT4P47944 62 aa5.26□□□□□ -1.57
LINC00339-207ENST00000634712 ROMO1P60602 79 aa5.23□□□□□ -1.57
LINC00339-207ENST00000634712 KRTAP5-4Q6L8H1 288 aa5.19□□□□□ -1.58
LINC00339-207ENST00000634712 KRTAP15-1Q3LI76 137 aa5.18□□□□□ -1.58
LINC00339-207ENST00000634712 HMCN1Q96RW7 5635 aa5.16□□□□□ -1.58
LINC00339-207ENST00000634712 GPR98Q8WXG9 6306 aa5.11□□□□□ -1.59
LINC00339-207ENST00000634712 LCE3CQ5T5A8 94 aa5.07□□□□□ -1.6
LINC00339-207ENST00000634712 KRTAP5-5Q701N2 237 aaPredicted RBP5.04□□□□□ -1.6
LINC00339-207ENST00000634712 KRTAP12-4P60329 112 aa4.97□□□□□ -1.61
LINC00339-207ENST00000634712 AHNAK2Q8IVF2 5795 aa4.93□□□□□ -1.62
LINC00339-207ENST00000634712 SPRR5A0A1B0GTR4 108 aa4.91□□□□□ -1.62
LINC00339-207ENST00000634712 KRTAP20-2Q3LI61 65 aa4.91□□□□□ -1.62
LINC00339-207ENST00000634712 SYNE1Q8NF91 8797 aaKnown RBP4.86□□□□□ -1.63
LINC00339-207ENST00000634712 KRTAP5-10Q6L8G5 202 aa4.82□□□□□ -1.64
LINC00339-207ENST00000634712 BRK1Q8WUW1 75 aa4.81□□□□□ -1.64
LINC00339-207ENST00000634712 A0A0A0MQY5 61 aa4.8□□□□□ -1.64
LINC00339-207ENST00000634712 MT1AP04731 61 aa4.76□□□□□ -1.65
LINC00339-207ENST00000634712 KRTAP9-6A8MVA2 160 aa4.72□□□□□ -1.65
LINC00339-207ENST00000634712 KRTAP6-1Q3LI64 71 aa4.72□□□□□ -1.65
LINC00339-207ENST00000634712 KRTAP5-7Q6L8G8 165 aa4.63□□□□□ -1.67
LINC00339-207ENST00000634712 KRTAP5-2Q701N4 177 aa4.56□□□□□ -1.68
LINC00339-207ENST00000634712 PMAIP1Q13794 54 aa4.54□□□□□ -1.68
LINC00339-207ENST00000634712 KRTAP6-2Q3LI66 62 aa4.5□□□□□ -1.69
LINC00339-207ENST00000634712 MT3P25713 68 aa4.39□□□□□ -1.71
LINC00339-207ENST00000634712 PRO0628Q9UI54 55 aa4.37□□□□□ -1.71
LINC00339-207ENST00000634712 PRAC1Q96KF2 57 aa4.31□□□□□ -1.72
LINC00339-207ENST00000634712 OBSCNQ5VST9 7968 aa4.31□□□□□ -1.72
LINC00339-207ENST00000634712 KRTAP5-8O75690 187 aa4.29□□□□□ -1.72
LINC00339-207ENST00000634712 KRTAP5-1Q6L8H4 278 aa4.08□□□□□ -1.76
LINC00339-207ENST00000634712 KTN1-AS1Q86SY8 53 aa4.04□□□□□ -1.76
LINC00339-207ENST00000634712 MUC5BQ9HC84 5762 aaPredicted RBP4.04□□□□□ -1.76
LINC00339-207ENST00000634712 AHNAKQ09666 5890 aaKnown RBP4.01□□□□□ -1.77
LINC00339-207ENST00000634712 MUC5ACP98088 5654 aa4□□□□□ -1.77
LINC00339-207ENST00000634712 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.98□□□□□ -1.77
LINC00339-207ENST00000634712 LCE1EQ5T753 118 aa3.97□□□□□ -1.77
LINC00339-207ENST00000634712 KRTAP5-11Q6L8G4 156 aa3.81□□□□□ -1.8
LINC00339-207ENST00000634712 LCE1BQ5T7P3 118 aa3.76□□□□□ -1.81
LINC00339-207ENST00000634712 LUZP6Q538Z0 58 aa3.72□□□□□ -1.81
LINC00339-207ENST00000634712 LCE3DQ9BYE3 92 aa3.7□□□□□ -1.82
LINC00339-207ENST00000634712 LCE1CQ5T751 118 aa3.68□□□□□ -1.82
LINC00339-207ENST00000634712 NDUFAF8A1L188 74 aa3.56□□□□□ -1.84
LINC00339-207ENST00000634712 LCE1FQ5T754 118 aa3.55□□□□□ -1.84
LINC00339-207ENST00000634712 LCE3EQ5T5B0 92 aa3.5□□□□□ -1.85
LINC00339-207ENST00000634712 KRTAP4-4Q9BYR3 166 aa3.28□□□□□ -1.88
LINC00339-207ENST00000634712 KRTAP21-2Q3LI59 83 aa3.09□□□□□ -1.92
LINC00339-207ENST00000634712 PHGR1C9JFL3 82 aa2.86□□□□□ -1.95
LINC00339-207ENST00000634712 PRM1P04553 51 aa2.67□□□□□ -1.98
LINC00339-207ENST00000634712 INE1O15225 51 aa2.66□□□□□ -1.98
LINC00339-207ENST00000634712 MUC19Q7Z5P9 8384 aa2.64□□□□□ -1.99
LINC00339-207ENST00000634712 KRTAP21-1Q3LI58 79 aa2.16□□□□□ -2.06
LINC00339-207ENST00000634712 MUC16Q8WXI7 14507 aa1.9□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 400.5 ms