RNA–Protein interactions for RNA: ENST00000634451.2

LINC00339-206, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-206ENST00000634451 LCE3AQ5TA76 89 aa4.4□□□□□ -1.71
LINC00339-206ENST00000634451 KRTAP12-1P59990 96 aa4.39□□□□□ -1.71
LINC00339-206ENST00000634451 KRTAP20-2Q3LI61 65 aa4.36□□□□□ -1.71
LINC00339-206ENST00000634451 SPRR5A0A1B0GTR4 108 aa4.33□□□□□ -1.72
LINC00339-206ENST00000634451 SPANXA2-OT1Q8N9U9 137 aa4.29□□□□□ -1.72
LINC00339-206ENST00000634451 KRTAP5-5Q701N2 237 aaPredicted RBP4.28□□□□□ -1.72
LINC00339-206ENST00000634451 COA5Q86WW8 74 aa4.28□□□□□ -1.72
LINC00339-206ENST00000634451 SMIM20Q8N5G0 67 aa4.26□□□□□ -1.73
LINC00339-206ENST00000634451 A0A1B0GU33 70 aa4.25□□□□□ -1.73
LINC00339-206ENST00000634451 A8MU10 97 aa4.23□□□□□ -1.73
LINC00339-206ENST00000634451 SERP1Q9Y6X1 66 aa4.23□□□□□ -1.73
LINC00339-206ENST00000634451 SYNE1Q8NF91 8797 aaKnown RBP4.2□□□□□ -1.74
LINC00339-206ENST00000634451 SEC61GP60059 68 aa4.19□□□□□ -1.74
LINC00339-206ENST00000634451 TNP1P09430 55 aa4.17□□□□□ -1.74
LINC00339-206ENST00000634451 PCP4P48539 62 aa4.17□□□□□ -1.74
LINC00339-206ENST00000634451 KRTAP12-3P60328 96 aa4.16□□□□□ -1.74
LINC00339-206ENST00000634451 KRTAP12-4P60329 112 aa4.14□□□□□ -1.75
LINC00339-206ENST00000634451 SERP2Q8N6R1 65 aa4.1□□□□□ -1.75
LINC00339-206ENST00000634451 ANAPC13Q9BS18 74 aa4.08□□□□□ -1.76
LINC00339-206ENST00000634451 SMIM26A0A096LP01 95 aa4.07□□□□□ -1.76
LINC00339-206ENST00000634451 KRTAP23-1A1A580 65 aa4.07□□□□□ -1.76
LINC00339-206ENST00000634451 COX7CP15954 63 aa4.03□□□□□ -1.76
LINC00339-206ENST00000634451 A0A1B0GU69 56 aa4.01□□□□□ -1.77
LINC00339-206ENST00000634451 AHNAKQ09666 5890 aaKnown RBP3.99□□□□□ -1.77
LINC00339-206ENST00000634451 A0A0A0MQY5 61 aa3.98□□□□□ -1.77
LINC00339-206ENST00000634451 MUC5ACP98088 5654 aa3.96□□□□□ -1.78
LINC00339-206ENST00000634451 KRTAP5-2Q701N4 177 aa3.96□□□□□ -1.78
LINC00339-206ENST00000634451 H7BZZ5 65 aa3.95□□□□□ -1.78
LINC00339-206ENST00000634451 KRTAP5-8O75690 187 aa3.95□□□□□ -1.78
LINC00339-206ENST00000634451 CCDC179H3BU77 68 aa3.93□□□□□ -1.78
LINC00339-206ENST00000634451 MUC5BQ9HC84 5762 aaPredicted RBP3.92□□□□□ -1.78
LINC00339-206ENST00000634451 KRTAP6-1Q3LI64 71 aa3.91□□□□□ -1.78
LINC00339-206ENST00000634451 ATP5EP56381 51 aaPredicted RBP3.88□□□□□ -1.79
LINC00339-206ENST00000634451 TMEM258P61165 79 aa3.87□□□□□ -1.79
LINC00339-206ENST00000634451 MT1AP04731 61 aa3.85□□□□□ -1.79
LINC00339-206ENST00000634451 LCE3CQ5T5A8 94 aa3.8□□□□□ -1.8
LINC00339-206ENST00000634451 KRTAP6-2Q3LI66 62 aa3.78□□□□□ -1.8
LINC00339-206ENST00000634451 OBSCNQ5VST9 7968 aa3.77□□□□□ -1.81
LINC00339-206ENST00000634451 KRTAP15-1Q3LI76 137 aa3.76□□□□□ -1.81
LINC00339-206ENST00000634451 KRTAP25-1Q3LHN0 102 aa3.75□□□□□ -1.81
LINC00339-206ENST00000634451 KRTAP9-6A8MVA2 160 aa3.71□□□□□ -1.82
LINC00339-206ENST00000634451 PRR15LQ9BU68 103 aa3.7□□□□□ -1.82
LINC00339-206ENST00000634451 LINC01558Q9Y6Z2 57 aa3.68□□□□□ -1.82
LINC00339-206ENST00000634451 RPS28P62857 69 aaKnown RBP3.66□□□□□ -1.82
LINC00339-206ENST00000634451 KRTAP5-1Q6L8H4 278 aa3.63□□□□□ -1.83
LINC00339-206ENST00000634451 V9GYY9 64 aa3.62□□□□□ -1.83
LINC00339-206ENST00000634451 UQCR11O14957 56 aa3.61□□□□□ -1.83
LINC00339-206ENST00000634451 Q1T7F1 81 aa3.55□□□□□ -1.84
LINC00339-206ENST00000634451 MIR22HGQ0VDD5 57 aa3.54□□□□□ -1.84
LINC00339-206ENST00000634451 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.53□□□□□ -1.84
LINC00339-206ENST00000634451 PSPHP1O15172 72 aa3.49□□□□□ -1.85
LINC00339-206ENST00000634451 MT3P25713 68 aa3.49□□□□□ -1.85
LINC00339-206ENST00000634451 K7ERS5 55 aa3.43□□□□□ -1.86
LINC00339-206ENST00000634451 A6NED7 52 aa3.42□□□□□ -1.86
LINC00339-206ENST00000634451 KRTAP5-11Q6L8G4 156 aa3.37□□□□□ -1.87
LINC00339-206ENST00000634451 CDC42SE1Q9NRR8 79 aa3.34□□□□□ -1.87
LINC00339-206ENST00000634451 BRK1Q8WUW1 75 aa3.29□□□□□ -1.88
LINC00339-206ENST00000634451 PRAC1Q96KF2 57 aa3.26□□□□□ -1.89
LINC00339-206ENST00000634451 LCE1EQ5T753 118 aa3.25□□□□□ -1.89
LINC00339-206ENST00000634451 ROMO1P60602 79 aa3.23□□□□□ -1.89
LINC00339-206ENST00000634451 LCE1BQ5T7P3 118 aa3.2□□□□□ -1.9
LINC00339-206ENST00000634451 PRO0628Q9UI54 55 aa3.16□□□□□ -1.9
LINC00339-206ENST00000634451 PMAIP1Q13794 54 aa3.11□□□□□ -1.91
LINC00339-206ENST00000634451 LCE1CQ5T751 118 aa3.04□□□□□ -1.92
LINC00339-206ENST00000634451 KTN1-AS1Q86SY8 53 aa2.96□□□□□ -1.94
LINC00339-206ENST00000634451 KRTAP4-4Q9BYR3 166 aa2.93□□□□□ -1.94
LINC00339-206ENST00000634451 NDUFAF8A1L188 74 aa2.9□□□□□ -1.95
LINC00339-206ENST00000634451 LCE1FQ5T754 118 aa2.73□□□□□ -1.97
LINC00339-206ENST00000634451 PHGR1C9JFL3 82 aa2.72□□□□□ -1.97
LINC00339-206ENST00000634451 LCE3DQ9BYE3 92 aa2.64□□□□□ -1.99
LINC00339-206ENST00000634451 KRTAP21-2Q3LI59 83 aa2.57□□□□□ -2
LINC00339-206ENST00000634451 LUZP6Q538Z0 58 aa2.46□□□□□ -2.02
LINC00339-206ENST00000634451 LCE3EQ5T5B0 92 aa2.43□□□□□ -2.02
LINC00339-206ENST00000634451 MUC19Q7Z5P9 8384 aa2.36□□□□□ -2.03
LINC00339-206ENST00000634451 KRTAP21-1Q3LI58 79 aa2.01□□□□□ -2.09
LINC00339-206ENST00000634451 INE1O15225 51 aa1.91□□□□□ -2.1
LINC00339-206ENST00000634451 PRM1P04553 51 aa1.69□□□□□ -2.14
LINC00339-206ENST00000634451 MUC16Q8WXI7 14507 aa1.63□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 44.3 ms