RNA–Protein interactions for RNA: ENST00000633956.1

SORT1-210, Transcript of sortilin 1, humanhuman

TSL 4

Gene SORT1, Length 561 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-210ENST00000633956 LCE3AQ5TA76 89 aa2.18□□□□□ -2.06
SORT1-210ENST00000633956 USH2AO75445 5202 aa2.18□□□□□ -2.06
SORT1-210ENST00000633956 KRTAP19-6Q3LI70 58 aa2.17□□□□□ -2.06
SORT1-210ENST00000633956 PP632Q6XCG6 107 aa2.17□□□□□ -2.06
SORT1-210ENST00000633956 KRTAP10-12P60413 245 aa2.16□□□□□ -2.06
SORT1-210ENST00000633956 LCE1EQ5T753 118 aa2.15□□□□□ -2.07
SORT1-210ENST00000633956 SSPOA2VEC9 5147 aa2.14□□□□□ -2.07
SORT1-210ENST00000633956 KRTAP8-1Q8IUC2 63 aa2.1□□□□□ -2.07
SORT1-210ENST00000633956 KRTAP19-5Q3LI72 72 aa2.07□□□□□ -2.08
SORT1-210ENST00000633956 KRTAP12-3P60328 96 aa2.06□□□□□ -2.08
SORT1-210ENST00000633956 CRCT1Q9UGL9 99 aa2.05□□□□□ -2.08
SORT1-210ENST00000633956 KRTAP5-1Q6L8H4 278 aa2.04□□□□□ -2.08
SORT1-210ENST00000633956 KRTAP19-7Q3SYF9 63 aa2.03□□□□□ -2.08
SORT1-210ENST00000633956 KMT2DO14686 5537 aa2.02□□□□□ -2.09
SORT1-210ENST00000633956 FCGBPQ9Y6R7 5405 aaPredicted RBP2.01□□□□□ -2.09
SORT1-210ENST00000633956 MT3P25713 68 aa2.01□□□□□ -2.09
SORT1-210ENST00000633956 MT1EP04732 61 aa1.99□□□□□ -2.09
SORT1-210ENST00000633956 FSIP2Q5CZC0 6907 aa1.98□□□□□ -2.09
SORT1-210ENST00000633956 NDUFAF8A1L188 74 aa1.98□□□□□ -2.09
SORT1-210ENST00000633956 KRTAP5-4Q6L8H1 288 aa1.96□□□□□ -2.1
SORT1-210ENST00000633956 MT1LQ93083 61 aa1.96□□□□□ -2.1
SORT1-210ENST00000633956 KRTAP4-4Q9BYR3 166 aa1.96□□□□□ -2.1
SORT1-210ENST00000633956 SPRR5A0A1B0GTR4 108 aa1.94□□□□□ -2.1
SORT1-210ENST00000633956 SPRR2FQ96RM1 72 aa1.94□□□□□ -2.1
SORT1-210ENST00000633956 KRTAP5-9P26371 169 aa1.93□□□□□ -2.1
SORT1-210ENST00000633956 LCE3CQ5T5A8 94 aa1.93□□□□□ -2.1
SORT1-210ENST00000633956 KRTAP9-6A8MVA2 160 aa1.92□□□□□ -2.1
SORT1-210ENST00000633956 KRTAP19-3Q7Z4W3 81 aa1.9□□□□□ -2.11
SORT1-210ENST00000633956 LCE1FQ5T754 118 aa1.89□□□□□ -2.11
SORT1-210ENST00000633956 MT1GP13640 62 aa1.88□□□□□ -2.11
SORT1-210ENST00000633956 LUZP6Q538Z0 58 aa1.88□□□□□ -2.11
SORT1-210ENST00000633956 MT1MQ8N339 61 aa1.87□□□□□ -2.11
SORT1-210ENST00000633956 KRTAP4-3Q9BYR4 195 aa1.87□□□□□ -2.11
SORT1-210ENST00000633956 KRTAP6-3Q3LI67 103 aa1.85□□□□□ -2.11
SORT1-210ENST00000633956 MUC12Q9UKN1 5478 aa1.85□□□□□ -2.11
SORT1-210ENST00000633956 SPRR2EP22531 72 aa1.84□□□□□ -2.11
SORT1-210ENST00000633956 SPRR2BP35325 72 aa1.84□□□□□ -2.11
SORT1-210ENST00000633956 SPRR2AP35326 72 aa1.84□□□□□ -2.11
SORT1-210ENST00000633956 MACF1Q9UPN3 7388 aaKnown RBP1.79□□□□□ -2.12
SORT1-210ENST00000633956 SPRR2DP22532 72 aa1.77□□□□□ -2.13
SORT1-210ENST00000633956 KRTAP20-1Q3LI63 56 aa1.77□□□□□ -2.13
SORT1-210ENST00000633956 NEBP20929 6669 aa1.76□□□□□ -2.13
SORT1-210ENST00000633956 SYNE2Q8WXH0 6885 aaKnown RBP1.75□□□□□ -2.13
SORT1-210ENST00000633956 MDN1Q9NU22 5596 aa1.75□□□□□ -2.13
SORT1-210ENST00000633956 GPR98Q8WXG9 6306 aa1.7□□□□□ -2.14
SORT1-210ENST00000633956 KRTAP2-3P0C7H8 128 aa1.69□□□□□ -2.14
SORT1-210ENST00000633956 KRTAP2-4Q9BYR9 128 aa1.69□□□□□ -2.14
SORT1-210ENST00000633956 KRTAP2-1Q9BYU5 128 aa1.69□□□□□ -2.14
SORT1-210ENST00000633956 OBSCNQ5VST9 7968 aa1.69□□□□□ -2.14
SORT1-210ENST00000633956 KRTAP5-5Q701N2 237 aaPredicted RBP1.68□□□□□ -2.14
SORT1-210ENST00000633956 MT1AP04731 61 aa1.66□□□□□ -2.14
SORT1-210ENST00000633956 KRTAP6-1Q3LI64 71 aa1.66□□□□□ -2.14
SORT1-210ENST00000633956 KRTAP5-2Q701N4 177 aa1.66□□□□□ -2.14
SORT1-210ENST00000633956 LCE3EQ5T5B0 92 aa1.61□□□□□ -2.15
SORT1-210ENST00000633956 DSTQ03001 7570 aaKnown RBP1.6□□□□□ -2.15
SORT1-210ENST00000633956 MT4P47944 62 aa1.55□□□□□ -2.16
SORT1-210ENST00000633956 KRTAP12-4P60329 112 aa1.54□□□□□ -2.16
SORT1-210ENST00000633956 INE1O15225 51 aa1.52□□□□□ -2.17
SORT1-210ENST00000633956 KRTAP6-2Q3LI66 62 aa1.52□□□□□ -2.17
SORT1-210ENST00000633956 SYNE1Q8NF91 8797 aaKnown RBP1.51□□□□□ -2.17
SORT1-210ENST00000633956 KRTAP20-2Q3LI61 65 aa1.5□□□□□ -2.17
SORT1-210ENST00000633956 LCE3DQ9BYE3 92 aa1.45□□□□□ -2.18
SORT1-210ENST00000633956 AHNAK2Q8IVF2 5795 aa1.44□□□□□ -2.18
SORT1-210ENST00000633956 LCE1CQ5T751 118 aa1.4□□□□□ -2.19
SORT1-210ENST00000633956 LCE1BQ5T7P3 118 aa1.4□□□□□ -2.19
SORT1-210ENST00000633956 KRTAP5-7Q6L8G8 165 aa1.4□□□□□ -2.19
SORT1-210ENST00000633956 HMCN1Q96RW7 5635 aa1.39□□□□□ -2.19
SORT1-210ENST00000633956 KRTAP5-10Q6L8G5 202 aa1.37□□□□□ -2.19
SORT1-210ENST00000633956 KRTAP5-8O75690 187 aa1.36□□□□□ -2.19
SORT1-210ENST00000633956 AHNAKQ09666 5890 aaKnown RBP1.32□□□□□ -2.2
SORT1-210ENST00000633956 PRM1P04553 51 aa1.26□□□□□ -2.21
SORT1-210ENST00000633956 MUC5BQ9HC84 5762 aaPredicted RBP1.25□□□□□ -2.21
SORT1-210ENST00000633956 MUC5ACP98088 5654 aa1.19□□□□□ -2.22
SORT1-210ENST00000633956 MUC19Q7Z5P9 8384 aa1.12□□□□□ -2.23
SORT1-210ENST00000633956 KRTAP21-2Q3LI59 83 aa1.07□□□□□ -2.24
SORT1-210ENST00000633956 PHGR1C9JFL3 82 aa0.9□□□□□ -2.27
SORT1-210ENST00000633956 KRTAP21-1Q3LI58 79 aa0.76□□□□□ -2.29
SORT1-210ENST00000633956 MUC16Q8WXI7 14507 aa0.62□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 8.3 ms