RNA–Protein interactions for RNA: ENST00000633899.1

SF1-221, Transcript of splicing factor 1, humanhuman

TSL 4

Gene SF1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-221ENST00000633899 PP632Q6XCG6 107 aa7.5□□□□□ -1.21
SF1-221ENST00000633899 PCP4P48539 62 aa7.47□□□□□ -1.21
SF1-221ENST00000633899 A6NED7 52 aa7.45□□□□□ -1.22
SF1-221ENST00000633899 MT1LQ93083 61 aa7.43□□□□□ -1.22
SF1-221ENST00000633899 KRTAP25-1Q3LHN0 102 aa7.41□□□□□ -1.22
SF1-221ENST00000633899 RPS28P62857 69 aaKnown RBP7.38□□□□□ -1.23
SF1-221ENST00000633899 MT1MQ8N339 61 aa7.37□□□□□ -1.23
SF1-221ENST00000633899 DSTQ03001 7570 aaKnown RBP7.36□□□□□ -1.23
SF1-221ENST00000633899 KRTAP12-3P60328 96 aa7.34□□□□□ -1.23
SF1-221ENST00000633899 GPR98Q8WXG9 6306 aa7.24□□□□□ -1.25
SF1-221ENST00000633899 CDC42SE1Q9NRR8 79 aa7.19□□□□□ -1.26
SF1-221ENST00000633899 KRTAP4-3Q9BYR4 195 aa7.17□□□□□ -1.26
SF1-221ENST00000633899 KRTAP23-1A1A580 65 aa7.11□□□□□ -1.27
SF1-221ENST00000633899 KRTAP4-9Q9BYQ8 210 aa7.11□□□□□ -1.27
SF1-221ENST00000633899 ROMO1P60602 79 aa7.06□□□□□ -1.28
SF1-221ENST00000633899 KRTAP4-7Q9BYR0 210 aa7.06□□□□□ -1.28
SF1-221ENST00000633899 LCE4AQ5TA78 99 aa7.03□□□□□ -1.28
SF1-221ENST00000633899 LCE1DQ5T752 114 aa6.96□□□□□ -1.3
SF1-221ENST00000633899 MT4P47944 62 aa6.94□□□□□ -1.3
SF1-221ENST00000633899 KRTAP19-4Q3LI73 84 aa6.93□□□□□ -1.3
SF1-221ENST00000633899 KRTAP15-1Q3LI76 137 aa6.92□□□□□ -1.3
SF1-221ENST00000633899 KRTAP5-4Q6L8H1 288 aa6.88□□□□□ -1.31
SF1-221ENST00000633899 HMCN1Q96RW7 5635 aa6.78□□□□□ -1.32
SF1-221ENST00000633899 LCE3CQ5T5A8 94 aa6.76□□□□□ -1.33
SF1-221ENST00000633899 KRTAP4-6Q9BYQ5 205 aa6.72□□□□□ -1.33
SF1-221ENST00000633899 LOC100996750A0A140TA64 210 aa6.69□□□□□ -1.34
SF1-221ENST00000633899 KRTAP5-5Q701N2 237 aaPredicted RBP6.69□□□□□ -1.34
SF1-221ENST00000633899 BRK1Q8WUW1 75 aa6.58□□□□□ -1.36
SF1-221ENST00000633899 KRTAP12-4P60329 112 aa6.57□□□□□ -1.36
SF1-221ENST00000633899 AHNAK2Q8IVF2 5795 aa6.55□□□□□ -1.36
SF1-221ENST00000633899 KRTAP20-2Q3LI61 65 aa6.51□□□□□ -1.37
SF1-221ENST00000633899 SPRR5A0A1B0GTR4 108 aa6.5□□□□□ -1.37
SF1-221ENST00000633899 KRTAP5-10Q6L8G5 202 aa6.48□□□□□ -1.37
SF1-221ENST00000633899 SYNE1Q8NF91 8797 aaKnown RBP6.41□□□□□ -1.38
SF1-221ENST00000633899 MT1AP04731 61 aa6.34□□□□□ -1.39
SF1-221ENST00000633899 KRTAP9-6A8MVA2 160 aa6.31□□□□□ -1.4
SF1-221ENST00000633899 KRTAP5-7Q6L8G8 165 aa6.31□□□□□ -1.4
SF1-221ENST00000633899 KRTAP6-1Q3LI64 71 aa6.28□□□□□ -1.4
SF1-221ENST00000633899 KRTAP5-3Q6L8H2 238 aa6.28□□□□□ -1.4
SF1-221ENST00000633899 PMAIP1Q13794 54 aa6.18□□□□□ -1.42
SF1-221ENST00000633899 KRTAP9-4Q9BYQ2 154 aa6.1□□□□□ -1.43
SF1-221ENST00000633899 KRTAP5-2Q701N4 177 aa6.06□□□□□ -1.44
SF1-221ENST00000633899 KRTAP6-2Q3LI66 62 aa5.97□□□□□ -1.45
SF1-221ENST00000633899 KRTAP4-11Q9BYQ6 195 aa5.9□□□□□ -1.46
SF1-221ENST00000633899 PRAC1Q96KF2 57 aa5.89□□□□□ -1.47
SF1-221ENST00000633899 MT3P25713 68 aa5.81□□□□□ -1.48
SF1-221ENST00000633899 PRO0628Q9UI54 55 aa5.81□□□□□ -1.48
SF1-221ENST00000633899 KRTAP5-8O75690 187 aa5.68□□□□□ -1.5
SF1-221ENST00000633899 AHNAKQ09666 5890 aaKnown RBP5.59□□□□□ -1.51
SF1-221ENST00000633899 OBSCNQ5VST9 7968 aa5.59□□□□□ -1.51
SF1-221ENST00000633899 KTN1-AS1Q86SY8 53 aa5.56□□□□□ -1.52
SF1-221ENST00000633899 MUC5ACP98088 5654 aa5.55□□□□□ -1.52
SF1-221ENST00000633899 MUC5BQ9HC84 5762 aaPredicted RBP5.46□□□□□ -1.54
SF1-221ENST00000633899 KRTAP9-9Q9BYP9 154 aa5.41□□□□□ -1.54
SF1-221ENST00000633899 KRTAP5-1Q6L8H4 278 aa5.39□□□□□ -1.55
SF1-221ENST00000633899 SVIPQ8NHG7 77 aa5.39□□□□□ -1.55
SF1-221ENST00000633899 LCE1EQ5T753 118 aa5.26□□□□□ -1.57
SF1-221ENST00000633899 LUZP6Q538Z0 58 aa5.05□□□□□ -1.6
SF1-221ENST00000633899 LCE1BQ5T7P3 118 aa4.99□□□□□ -1.61
SF1-221ENST00000633899 LCE3DQ9BYE3 92 aa4.93□□□□□ -1.62
SF1-221ENST00000633899 KRTAP4-2Q9BYR5 136 aa4.93□□□□□ -1.62
SF1-221ENST00000633899 LCE1CQ5T751 118 aa4.87□□□□□ -1.63
SF1-221ENST00000633899 LCE3EQ5T5B0 92 aa4.67□□□□□ -1.66
SF1-221ENST00000633899 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.45□□□□□ -1.7
SF1-221ENST00000633899 KRTAP4-12Q9BQ66 201 aa4.43□□□□□ -1.7
SF1-221ENST00000633899 KRTAP5-11Q6L8G4 156 aa4.4□□□□□ -1.71
SF1-221ENST00000633899 LCE1FQ5T754 118 aa4.25□□□□□ -1.73
SF1-221ENST00000633899 NDUFAF8A1L188 74 aa4.12□□□□□ -1.75
SF1-221ENST00000633899 KRTAP21-2Q3LI59 83 aa4.11□□□□□ -1.75
SF1-221ENST00000633899 PHGR1C9JFL3 82 aa3.79□□□□□ -1.8
SF1-221ENST00000633899 KRTAP4-4Q9BYR3 166 aa3.77□□□□□ -1.81
SF1-221ENST00000633899 PRM1P04553 51 aa3.62□□□□□ -1.83
SF1-221ENST00000633899 MUC19Q7Z5P9 8384 aa3.45□□□□□ -1.86
SF1-221ENST00000633899 H3BS24 57 aa3.44□□□□□ -1.86
SF1-221ENST00000633899 A0A0A0MQY5 61 aa3.37□□□□□ -1.87
SF1-221ENST00000633899 INE1O15225 51 aa3.35□□□□□ -1.87
SF1-221ENST00000633899 KRTAP21-1Q3LI58 79 aa2.89□□□□□ -1.95
SF1-221ENST00000633899 MUC16Q8WXI7 14507 aa2.44□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 13.3 ms