RNA–Protein interactions for RNA: ENST00000633364.1

LIMS4-205, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best)

Gene LIMS4, Length 957 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-205ENST00000633364 DSTQ03001 7570 aaKnown RBP5.7□□□□□ -1.5
LIMS4-205ENST00000633364 KRTAP19-5Q3LI72 72 aa5.69□□□□□ -1.5
LIMS4-205ENST00000633364 TNP1P09430 55 aa5.67□□□□□ -1.5
LIMS4-205ENST00000633364 PP632Q6XCG6 107 aa5.62□□□□□ -1.51
LIMS4-205ENST00000633364 MT1GP13640 62 aa5.61□□□□□ -1.51
LIMS4-205ENST00000633364 KRTAP4-11Q9BYQ6 195 aa5.61□□□□□ -1.51
LIMS4-205ENST00000633364 C10orf95Q9H7T3 257 aa5.61□□□□□ -1.51
LIMS4-205ENST00000633364 KRTAP23-1A1A580 65 aa5.6□□□□□ -1.51
LIMS4-205ENST00000633364 UQCR11O14957 56 aa5.6□□□□□ -1.51
LIMS4-205ENST00000633364 KRTAP4-2Q9BYR5 136 aa5.58□□□□□ -1.52
LIMS4-205ENST00000633364 LCE3AQ5TA76 89 aa5.57□□□□□ -1.52
LIMS4-205ENST00000633364 MT1LQ93083 61 aa5.51□□□□□ -1.53
LIMS4-205ENST00000633364 MT1MQ8N339 61 aa5.49□□□□□ -1.53
LIMS4-205ENST00000633364 MIR22HGQ0VDD5 57 aa5.48□□□□□ -1.53
LIMS4-205ENST00000633364 V9GYY9 64 aa5.47□□□□□ -1.53
LIMS4-205ENST00000633364 K7ERS5 55 aa5.41□□□□□ -1.54
LIMS4-205ENST00000633364 PSPHP1O15172 72 aa5.41□□□□□ -1.54
LIMS4-205ENST00000633364 Q1T7F1 81 aa5.4□□□□□ -1.54
LIMS4-205ENST00000633364 KRTAP12-3P60328 96 aa5.38□□□□□ -1.55
LIMS4-205ENST00000633364 KRTAP4-3Q9BYR4 195 aa5.35□□□□□ -1.55
LIMS4-205ENST00000633364 GPR98Q8WXG9 6306 aa5.35□□□□□ -1.55
LIMS4-205ENST00000633364 MT4P47944 62 aa5.32□□□□□ -1.56
LIMS4-205ENST00000633364 KRTAP25-1Q3LHN0 102 aa5.32□□□□□ -1.56
LIMS4-205ENST00000633364 HMCN1Q96RW7 5635 aa5.27□□□□□ -1.57
LIMS4-205ENST00000633364 A6NED7 52 aa5.25□□□□□ -1.57
LIMS4-205ENST00000633364 KRTAP15-1Q3LI76 137 aa5.25□□□□□ -1.57
LIMS4-205ENST00000633364 KRTAP5-4Q6L8H1 288 aa5.19□□□□□ -1.58
LIMS4-205ENST00000633364 RPS28P62857 69 aaKnown RBP5.18□□□□□ -1.58
LIMS4-205ENST00000633364 PCP4P48539 62 aa5.16□□□□□ -1.58
LIMS4-205ENST00000633364 CDC42SE1Q9NRR8 79 aa5.1□□□□□ -1.59
LIMS4-205ENST00000633364 AHNAK2Q8IVF2 5795 aa5.08□□□□□ -1.6
LIMS4-205ENST00000633364 ROMO1P60602 79 aa5.01□□□□□ -1.61
LIMS4-205ENST00000633364 KRTAP5-5Q701N2 237 aaPredicted RBP4.99□□□□□ -1.61
LIMS4-205ENST00000633364 KRTAP12-4P60329 112 aa4.97□□□□□ -1.61
LIMS4-205ENST00000633364 LCE3CQ5T5A8 94 aa4.94□□□□□ -1.62
LIMS4-205ENST00000633364 KRTAP20-2Q3LI61 65 aa4.93□□□□□ -1.62
LIMS4-205ENST00000633364 SPRR5A0A1B0GTR4 108 aa4.91□□□□□ -1.62
LIMS4-205ENST00000633364 KRTAP5-10Q6L8G5 202 aa4.91□□□□□ -1.62
LIMS4-205ENST00000633364 SYNE1Q8NF91 8797 aaKnown RBP4.89□□□□□ -1.63
LIMS4-205ENST00000633364 KRTAP5-3Q6L8H2 238 aa4.84□□□□□ -1.63
LIMS4-205ENST00000633364 KRTAP5-7Q6L8G8 165 aa4.73□□□□□ -1.65
LIMS4-205ENST00000633364 MT1AP04731 61 aa4.7□□□□□ -1.66
LIMS4-205ENST00000633364 KRTAP6-1Q3LI64 71 aa4.66□□□□□ -1.66
LIMS4-205ENST00000633364 SVIPQ8NHG7 77 aa4.63□□□□□ -1.67
LIMS4-205ENST00000633364 KRTAP9-6A8MVA2 160 aa4.6□□□□□ -1.67
LIMS4-205ENST00000633364 BRK1Q8WUW1 75 aa4.58□□□□□ -1.68
LIMS4-205ENST00000633364 KRTAP5-2Q701N4 177 aa4.54□□□□□ -1.68
LIMS4-205ENST00000633364 KRTAP6-2Q3LI66 62 aa4.47□□□□□ -1.69
LIMS4-205ENST00000633364 OBSCNQ5VST9 7968 aa4.36□□□□□ -1.71
LIMS4-205ENST00000633364 MT3P25713 68 aa4.34□□□□□ -1.71
LIMS4-205ENST00000633364 KRTAP5-8O75690 187 aa4.33□□□□□ -1.72
LIMS4-205ENST00000633364 A0A0A0MQY5 61 aa4.3□□□□□ -1.72
LIMS4-205ENST00000633364 PMAIP1Q13794 54 aa4.3□□□□□ -1.72
LIMS4-205ENST00000633364 AHNAKQ09666 5890 aaKnown RBP4.21□□□□□ -1.74
LIMS4-205ENST00000633364 MUC5BQ9HC84 5762 aaPredicted RBP4.21□□□□□ -1.74
LIMS4-205ENST00000633364 MUC5ACP98088 5654 aa4.15□□□□□ -1.74
LIMS4-205ENST00000633364 PRAC1Q96KF2 57 aa4.11□□□□□ -1.75
LIMS4-205ENST00000633364 KRTAP5-1Q6L8H4 278 aa4.07□□□□□ -1.76
LIMS4-205ENST00000633364 PRO0628Q9UI54 55 aa4.01□□□□□ -1.77
LIMS4-205ENST00000633364 LCE1EQ5T753 118 aa3.94□□□□□ -1.78
LIMS4-205ENST00000633364 KTN1-AS1Q86SY8 53 aa3.84□□□□□ -1.79
LIMS4-205ENST00000633364 LCE1BQ5T7P3 118 aa3.77□□□□□ -1.81
LIMS4-205ENST00000633364 KRTAP5-11Q6L8G4 156 aa3.75□□□□□ -1.81
LIMS4-205ENST00000633364 LCE1CQ5T751 118 aa3.65□□□□□ -1.83
LIMS4-205ENST00000633364 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.65□□□□□ -1.83
LIMS4-205ENST00000633364 NDUFAF8A1L188 74 aa3.64□□□□□ -1.83
LIMS4-205ENST00000633364 LCE3DQ9BYE3 92 aa3.59□□□□□ -1.83
LIMS4-205ENST00000633364 LCE1FQ5T754 118 aa3.58□□□□□ -1.84
LIMS4-205ENST00000633364 LUZP6Q538Z0 58 aa3.52□□□□□ -1.85
LIMS4-205ENST00000633364 LCE3EQ5T5B0 92 aa3.37□□□□□ -1.87
LIMS4-205ENST00000633364 KRTAP21-2Q3LI59 83 aa3.04□□□□□ -1.92
LIMS4-205ENST00000633364 KRTAP4-4Q9BYR3 166 aa3.03□□□□□ -1.92
LIMS4-205ENST00000633364 PHGR1C9JFL3 82 aa2.92□□□□□ -1.94
LIMS4-205ENST00000633364 MUC19Q7Z5P9 8384 aa2.68□□□□□ -1.98
LIMS4-205ENST00000633364 PRM1P04553 51 aa2.56□□□□□ -2
LIMS4-205ENST00000633364 INE1O15225 51 aa2.29□□□□□ -2.04
LIMS4-205ENST00000633364 KRTAP21-1Q3LI58 79 aa2.21□□□□□ -2.06
LIMS4-205ENST00000633364 MUC16Q8WXI7 14507 aa1.92□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 72.5 ms