RNA–Protein interactions for RNA: ENST00000629570.1

LINC00550-202, long intergenic non-protein coding RNA 550, humanhuman

TSL 3

Gene LINC00550, Length 317 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-202ENST00000629570 SPINT4Q6UDR6 99 aa2.21□□□□□ -2.06
LINC00550-202ENST00000629570 PRR15LQ9BU68 103 aa2.21□□□□□ -2.06
LINC00550-202ENST00000629570 KRTAP5-2Q701N4 177 aa2.2□□□□□ -2.06
LINC00550-202ENST00000629570 KRTAP8-1Q8IUC2 63 aa2.2□□□□□ -2.06
LINC00550-202ENST00000629570 SMIM26A0A096LP01 95 aa2.19□□□□□ -2.06
LINC00550-202ENST00000629570 LCE3AQ5TA76 89 aa2.19□□□□□ -2.06
LINC00550-202ENST00000629570 SPRR2FQ96RM1 72 aa2.19□□□□□ -2.06
LINC00550-202ENST00000629570 MDN1Q9NU22 5596 aa2.19□□□□□ -2.06
LINC00550-202ENST00000629570 PCP4P48539 62 aa2.18□□□□□ -2.06
LINC00550-202ENST00000629570 A0A0A0MQY5 61 aa2.16□□□□□ -2.06
LINC00550-202ENST00000629570 UQCR11O14957 56 aa2.15□□□□□ -2.07
LINC00550-202ENST00000629570 PSPHP1O15172 72 aa2.15□□□□□ -2.07
LINC00550-202ENST00000629570 Q1T7F1 81 aa2.14□□□□□ -2.07
LINC00550-202ENST00000629570 LCE3EQ5T5B0 92 aa2.14□□□□□ -2.07
LINC00550-202ENST00000629570 V9GYY9 64 aa2.13□□□□□ -2.07
LINC00550-202ENST00000629570 SPRR2EP22531 72 aa2.12□□□□□ -2.07
LINC00550-202ENST00000629570 SPRR2BP35325 72 aa2.12□□□□□ -2.07
LINC00550-202ENST00000629570 SPRR2AP35326 72 aa2.12□□□□□ -2.07
LINC00550-202ENST00000629570 MIR22HGQ0VDD5 57 aa2.12□□□□□ -2.07
LINC00550-202ENST00000629570 C10orf95Q9H7T3 257 aa2.11□□□□□ -2.07
LINC00550-202ENST00000629570 RPS28P62857 69 aaKnown RBP2.09□□□□□ -2.07
LINC00550-202ENST00000629570 KRTAP19-7Q3SYF9 63 aa2.09□□□□□ -2.07
LINC00550-202ENST00000629570 TNP1P09430 55 aa2.07□□□□□ -2.08
LINC00550-202ENST00000629570 KRTAP20-1Q3LI63 56 aa2.07□□□□□ -2.08
LINC00550-202ENST00000629570 A6NED7 52 aa2.06□□□□□ -2.08
LINC00550-202ENST00000629570 MT1EP04732 61 aa2.06□□□□□ -2.08
LINC00550-202ENST00000629570 KRTAP19-5Q3LI72 72 aa2.06□□□□□ -2.08
LINC00550-202ENST00000629570 SPRR2DP22532 72 aa2.05□□□□□ -2.08
LINC00550-202ENST00000629570 K7ERS5 55 aa2.04□□□□□ -2.08
LINC00550-202ENST00000629570 KRTAP2-3P0C7H8 128 aa2.02□□□□□ -2.09
LINC00550-202ENST00000629570 KRTAP5-5Q701N2 237 aaPredicted RBP2.02□□□□□ -2.09
LINC00550-202ENST00000629570 KRTAP19-3Q7Z4W3 81 aa2.02□□□□□ -2.09
LINC00550-202ENST00000629570 KRTAP2-4Q9BYR9 128 aa2.02□□□□□ -2.09
LINC00550-202ENST00000629570 KRTAP25-1Q3LHN0 102 aa2□□□□□ -2.09
LINC00550-202ENST00000629570 MT1LQ93083 61 aa1.99□□□□□ -2.09
LINC00550-202ENST00000629570 CDC42SE1Q9NRR8 79 aa1.98□□□□□ -2.09
LINC00550-202ENST00000629570 DSTQ03001 7570 aaKnown RBP1.97□□□□□ -2.09
LINC00550-202ENST00000629570 KRTAP12-3P60328 96 aa1.97□□□□□ -2.09
LINC00550-202ENST00000629570 KRTAP2-1Q9BYU5 128 aa1.97□□□□□ -2.09
LINC00550-202ENST00000629570 MT1GP13640 62 aa1.96□□□□□ -2.1
LINC00550-202ENST00000629570 NDUFAF8A1L188 74 aa1.95□□□□□ -2.1
LINC00550-202ENST00000629570 MT1MQ8N339 61 aa1.95□□□□□ -2.1
LINC00550-202ENST00000629570 PP632Q6XCG6 107 aa1.94□□□□□ -2.1
LINC00550-202ENST00000629570 ROMO1P60602 79 aa1.93□□□□□ -2.1
LINC00550-202ENST00000629570 LCE1CQ5T751 118 aa1.91□□□□□ -2.1
LINC00550-202ENST00000629570 LCE1BQ5T7P3 118 aa1.91□□□□□ -2.1
LINC00550-202ENST00000629570 BRK1Q8WUW1 75 aa1.87□□□□□ -2.11
LINC00550-202ENST00000629570 KRTAP5-8O75690 187 aa1.83□□□□□ -2.12
LINC00550-202ENST00000629570 MT4P47944 62 aa1.8□□□□□ -2.12
LINC00550-202ENST00000629570 HMCN1Q96RW7 5635 aa1.8□□□□□ -2.12
LINC00550-202ENST00000629570 PRAC1Q96KF2 57 aa1.78□□□□□ -2.12
LINC00550-202ENST00000629570 PMAIP1Q13794 54 aa1.77□□□□□ -2.13
LINC00550-202ENST00000629570 SVIPQ8NHG7 77 aa1.76□□□□□ -2.13
LINC00550-202ENST00000629570 GPR98Q8WXG9 6306 aa1.75□□□□□ -2.13
LINC00550-202ENST00000629570 SYNE1Q8NF91 8797 aaKnown RBP1.71□□□□□ -2.14
LINC00550-202ENST00000629570 PRO0628Q9UI54 55 aa1.71□□□□□ -2.14
LINC00550-202ENST00000629570 KRTAP20-2Q3LI61 65 aa1.7□□□□□ -2.14
LINC00550-202ENST00000629570 KRTAP12-4P60329 112 aa1.69□□□□□ -2.14
LINC00550-202ENST00000629570 SPRR5A0A1B0GTR4 108 aa1.68□□□□□ -2.14
LINC00550-202ENST00000629570 MT1AP04731 61 aa1.68□□□□□ -2.14
LINC00550-202ENST00000629570 KRTAP6-1Q3LI64 71 aa1.68□□□□□ -2.14
LINC00550-202ENST00000629570 AHNAK2Q8IVF2 5795 aa1.67□□□□□ -2.14
LINC00550-202ENST00000629570 MUC19Q7Z5P9 8384 aa1.66□□□□□ -2.14
LINC00550-202ENST00000629570 LCE3DQ9BYE3 92 aa1.65□□□□□ -2.15
LINC00550-202ENST00000629570 KRTAP5-10Q6L8G5 202 aa1.63□□□□□ -2.15
LINC00550-202ENST00000629570 KTN1-AS1Q86SY8 53 aa1.61□□□□□ -2.15
LINC00550-202ENST00000629570 KRTAP6-2Q3LI66 62 aa1.59□□□□□ -2.15
LINC00550-202ENST00000629570 KRTAP5-7Q6L8G8 165 aa1.58□□□□□ -2.16
LINC00550-202ENST00000629570 LUZP6Q538Z0 58 aa1.43□□□□□ -2.18
LINC00550-202ENST00000629570 MUC5BQ9HC84 5762 aaPredicted RBP1.39□□□□□ -2.19
LINC00550-202ENST00000629570 KRTAP21-2Q3LI59 83 aa1.39□□□□□ -2.19
LINC00550-202ENST00000629570 MUC5ACP98088 5654 aa1.39□□□□□ -2.19
LINC00550-202ENST00000629570 AHNAKQ09666 5890 aaKnown RBP1.35□□□□□ -2.19
LINC00550-202ENST00000629570 INE1O15225 51 aa1.02□□□□□ -2.25
LINC00550-202ENST00000629570 PRM1P04553 51 aa1.01□□□□□ -2.25
LINC00550-202ENST00000629570 PHGR1C9JFL3 82 aa1□□□□□ -2.25
LINC00550-202ENST00000629570 KRTAP21-1Q3LI58 79 aa0.7□□□□□ -2.3
LINC00550-202ENST00000629570 MUC16Q8WXI7 14507 aa0.68□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 63.6 ms