RNA–Protein interactions for RNA: ENST00000628867.1

SPTAN1-215, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-215ENST00000628867 KRTAP4-11Q9BYQ6 195 aa2.9□□□□□ -1.95
SPTAN1-215ENST00000628867 HMCN1Q96RW7 5635 aa2.89□□□□□ -1.95
SPTAN1-215ENST00000628867 KRTAP13-4Q3LI77 160 aa2.89□□□□□ -1.95
SPTAN1-215ENST00000628867 KRTAP19-3Q7Z4W3 81 aa2.89□□□□□ -1.95
SPTAN1-215ENST00000628867 SPRR5A0A1B0GTR4 108 aa2.88□□□□□ -1.95
SPTAN1-215ENST00000628867 PP632Q6XCG6 107 aa2.86□□□□□ -1.95
SPTAN1-215ENST00000628867 KRTAP5-7Q6L8G8 165 aa2.84□□□□□ -1.95
SPTAN1-215ENST00000628867 AHNAK2Q8IVF2 5795 aa2.83□□□□□ -1.96
SPTAN1-215ENST00000628867 CCDC179H3BU77 68 aa2.83□□□□□ -1.96
SPTAN1-215ENST00000628867 MT1EP04732 61 aa2.82□□□□□ -1.96
SPTAN1-215ENST00000628867 MT1GP13640 62 aa2.82□□□□□ -1.96
SPTAN1-215ENST00000628867 KRTAP19-7Q3SYF9 63 aa2.8□□□□□ -1.96
SPTAN1-215ENST00000628867 LUZP6Q538Z0 58 aa2.8□□□□□ -1.96
SPTAN1-215ENST00000628867 K7ERS5 55 aa2.77□□□□□ -1.97
SPTAN1-215ENST00000628867 ATP5EP56381 51 aaPredicted RBP2.77□□□□□ -1.97
SPTAN1-215ENST00000628867 RPS28P62857 69 aaKnown RBP2.77□□□□□ -1.97
SPTAN1-215ENST00000628867 SPATA8Q6RVD6 105 aa2.76□□□□□ -1.97
SPTAN1-215ENST00000628867 SERP1Q9Y6X1 66 aa2.75□□□□□ -1.97
SPTAN1-215ENST00000628867 A0A1B0GU33 70 aa2.74□□□□□ -1.97
SPTAN1-215ENST00000628867 KRTAP5-4Q6L8H1 288 aa2.74□□□□□ -1.97
SPTAN1-215ENST00000628867 A0A0D9SG42 100 aa2.73□□□□□ -1.97
SPTAN1-215ENST00000628867 KRTAP12-1P59990 96 aa2.73□□□□□ -1.97
SPTAN1-215ENST00000628867 TMEM258P61165 79 aa2.73□□□□□ -1.97
SPTAN1-215ENST00000628867 A0A1B0GU69 56 aa2.72□□□□□ -1.97
SPTAN1-215ENST00000628867 MT1MQ8N339 61 aa2.72□□□□□ -1.97
SPTAN1-215ENST00000628867 KRTAP19-5Q3LI72 72 aa2.71□□□□□ -1.98
SPTAN1-215ENST00000628867 A6NED7 52 aa2.7□□□□□ -1.98
SPTAN1-215ENST00000628867 KTN1-AS1Q86SY8 53 aa2.7□□□□□ -1.98
SPTAN1-215ENST00000628867 A8MU10 97 aa2.68□□□□□ -1.98
SPTAN1-215ENST00000628867 SPINT4Q6UDR6 99 aa2.67□□□□□ -1.98
SPTAN1-215ENST00000628867 LINC01558Q9Y6Z2 57 aa2.67□□□□□ -1.98
SPTAN1-215ENST00000628867 KRTAP4-3Q9BYR4 195 aa2.66□□□□□ -1.98
SPTAN1-215ENST00000628867 MT1LQ93083 61 aa2.65□□□□□ -1.99
SPTAN1-215ENST00000628867 KRTAP20-2Q3LI61 65 aa2.64□□□□□ -1.99
SPTAN1-215ENST00000628867 PRR15LQ9BU68 103 aa2.64□□□□□ -1.99
SPTAN1-215ENST00000628867 KRTAP12-4P60329 112 aa2.63□□□□□ -1.99
SPTAN1-215ENST00000628867 C10orf95Q9H7T3 257 aa2.59□□□□□ -1.99
SPTAN1-215ENST00000628867 BRK1Q8WUW1 75 aa2.58□□□□□ -2
SPTAN1-215ENST00000628867 UQCR11O14957 56 aa2.57□□□□□ -2
SPTAN1-215ENST00000628867 LCE3AQ5TA76 89 aa2.55□□□□□ -2
SPTAN1-215ENST00000628867 Q1T7F1 81 aa2.54□□□□□ -2
SPTAN1-215ENST00000628867 TNP1P09430 55 aa2.52□□□□□ -2.01
SPTAN1-215ENST00000628867 MIR22HGQ0VDD5 57 aa2.52□□□□□ -2.01
SPTAN1-215ENST00000628867 KRTAP25-1Q3LHN0 102 aa2.47□□□□□ -2.01
SPTAN1-215ENST00000628867 AHNAKQ09666 5890 aaKnown RBP2.47□□□□□ -2.01
SPTAN1-215ENST00000628867 MT3P25713 68 aa2.46□□□□□ -2.02
SPTAN1-215ENST00000628867 KRTAP5-5Q701N2 237 aaPredicted RBP2.46□□□□□ -2.02
SPTAN1-215ENST00000628867 MUC5ACP98088 5654 aa2.43□□□□□ -2.02
SPTAN1-215ENST00000628867 KRTAP5-8O75690 187 aa2.43□□□□□ -2.02
SPTAN1-215ENST00000628867 KRTAP12-3P60328 96 aa2.43□□□□□ -2.02
SPTAN1-215ENST00000628867 SYNE1Q8NF91 8797 aaKnown RBP2.43□□□□□ -2.02
SPTAN1-215ENST00000628867 MUC5BQ9HC84 5762 aaPredicted RBP2.4□□□□□ -2.03
SPTAN1-215ENST00000628867 ROMO1P60602 79 aa2.38□□□□□ -2.03
SPTAN1-215ENST00000628867 CDC42SE1Q9NRR8 79 aa2.35□□□□□ -2.03
SPTAN1-215ENST00000628867 OBSCNQ5VST9 7968 aa2.33□□□□□ -2.04
SPTAN1-215ENST00000628867 KRTAP5-2Q701N4 177 aa2.32□□□□□ -2.04
SPTAN1-215ENST00000628867 MT1AP04731 61 aa2.26□□□□□ -2.05
SPTAN1-215ENST00000628867 KRTAP6-1Q3LI64 71 aa2.25□□□□□ -2.05
SPTAN1-215ENST00000628867 KRTAP6-2Q3LI66 62 aa2.24□□□□□ -2.05
SPTAN1-215ENST00000628867 LCE3CQ5T5A8 94 aa2.24□□□□□ -2.05
SPTAN1-215ENST00000628867 LCE1FQ5T754 118 aa2.24□□□□□ -2.05
SPTAN1-215ENST00000628867 KRTAP9-6A8MVA2 160 aa2.17□□□□□ -2.06
SPTAN1-215ENST00000628867 KRTAP5-1Q6L8H4 278 aa2.15□□□□□ -2.07
SPTAN1-215ENST00000628867 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.13□□□□□ -2.07
SPTAN1-215ENST00000628867 LCE1EQ5T753 118 aa2.04□□□□□ -2.08
SPTAN1-215ENST00000628867 INE1O15225 51 aa2.01□□□□□ -2.09
SPTAN1-215ENST00000628867 LCE1BQ5T7P3 118 aa1.97□□□□□ -2.09
SPTAN1-215ENST00000628867 KRTAP5-11Q6L8G4 156 aa1.95□□□□□ -2.1
SPTAN1-215ENST00000628867 LCE3EQ5T5B0 92 aa1.9□□□□□ -2.11
SPTAN1-215ENST00000628867 LCE1CQ5T751 118 aa1.84□□□□□ -2.11
SPTAN1-215ENST00000628867 PHGR1C9JFL3 82 aa1.77□□□□□ -2.13
SPTAN1-215ENST00000628867 KRTAP4-4Q9BYR3 166 aa1.74□□□□□ -2.13
SPTAN1-215ENST00000628867 LCE3DQ9BYE3 92 aa1.71□□□□□ -2.14
SPTAN1-215ENST00000628867 KRTAP21-2Q3LI59 83 aa1.46□□□□□ -2.18
SPTAN1-215ENST00000628867 MUC19Q7Z5P9 8384 aa1.45□□□□□ -2.18
SPTAN1-215ENST00000628867 KRTAP21-1Q3LI58 79 aa1.35□□□□□ -2.19
SPTAN1-215ENST00000628867 PRM1P04553 51 aa1.21□□□□□ -2.22
SPTAN1-215ENST00000628867 MUC16Q8WXI7 14507 aa1□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 117.9 ms