RNA–Protein interactions for RNA: ENST00000628509.1

FOXCUT-201, FOXC1 upstream transcript, humanhuman

TSL 3 BASIC

Gene FOXCUT, Length 333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXCUT-201ENST00000628509 USH2AO75445 5202 aa4.05□□□□□ -1.76
FOXCUT-201ENST00000628509 KRTAP10-12P60413 245 aa4.05□□□□□ -1.76
FOXCUT-201ENST00000628509 KRTAP5-11Q6L8G4 156 aa4.04□□□□□ -1.76
FOXCUT-201ENST00000628509 PRAC1Q96KF2 57 aa3.97□□□□□ -1.77
FOXCUT-201ENST00000628509 SSPOA2VEC9 5147 aa3.95□□□□□ -1.78
FOXCUT-201ENST00000628509 LCE3AQ5TA76 89 aa3.91□□□□□ -1.78
FOXCUT-201ENST00000628509 KRTAP2-2Q9BYT5 123 aa3.9□□□□□ -1.79
FOXCUT-201ENST00000628509 KRTAP8-1Q8IUC2 63 aa3.89□□□□□ -1.79
FOXCUT-201ENST00000628509 LCE1EQ5T753 118 aa3.85□□□□□ -1.79
FOXCUT-201ENST00000628509 SYNE2Q8WXH0 6885 aaKnown RBP3.85□□□□□ -1.79
FOXCUT-201ENST00000628509 NEBP20929 6669 aa3.84□□□□□ -1.79
FOXCUT-201ENST00000628509 KRTAP12-3P60328 96 aa3.83□□□□□ -1.8
FOXCUT-201ENST00000628509 FCGBPQ9Y6R7 5405 aaPredicted RBP3.82□□□□□ -1.8
FOXCUT-201ENST00000628509 KRTAP19-5Q3LI72 72 aa3.77□□□□□ -1.81
FOXCUT-201ENST00000628509 GPR98Q8WXG9 6306 aa3.75□□□□□ -1.81
FOXCUT-201ENST00000628509 SPRR2FQ96RM1 72 aa3.72□□□□□ -1.81
FOXCUT-201ENST00000628509 KRTAP19-7Q3SYF9 63 aa3.71□□□□□ -1.82
FOXCUT-201ENST00000628509 KRTAP6-3Q3LI67 103 aa3.7□□□□□ -1.82
FOXCUT-201ENST00000628509 MACF1Q9UPN3 7388 aaKnown RBP3.7□□□□□ -1.82
FOXCUT-201ENST00000628509 KRTAP5-9P26371 169 aa3.69□□□□□ -1.82
FOXCUT-201ENST00000628509 MT1EP04732 61 aa3.68□□□□□ -1.82
FOXCUT-201ENST00000628509 KRTAP20-1Q3LI63 56 aa3.64□□□□□ -1.83
FOXCUT-201ENST00000628509 MT1GP13640 62 aa3.62□□□□□ -1.83
FOXCUT-201ENST00000628509 KRTAP19-3Q7Z4W3 81 aa3.61□□□□□ -1.83
FOXCUT-201ENST00000628509 MT1LQ93083 61 aa3.6□□□□□ -1.83
FOXCUT-201ENST00000628509 KMT2DO14686 5537 aa3.58□□□□□ -1.84
FOXCUT-201ENST00000628509 KRTAP5-1Q6L8H4 278 aa3.58□□□□□ -1.84
FOXCUT-201ENST00000628509 SPRR2EP22531 72 aa3.57□□□□□ -1.84
FOXCUT-201ENST00000628509 SPRR2BP35325 72 aa3.57□□□□□ -1.84
FOXCUT-201ENST00000628509 SPRR2AP35326 72 aa3.57□□□□□ -1.84
FOXCUT-201ENST00000628509 LCE3CQ5T5A8 94 aa3.57□□□□□ -1.84
FOXCUT-201ENST00000628509 LUZP6Q538Z0 58 aa3.54□□□□□ -1.84
FOXCUT-201ENST00000628509 MT3P25713 68 aa3.53□□□□□ -1.84
FOXCUT-201ENST00000628509 MT1MQ8N339 61 aa3.48□□□□□ -1.85
FOXCUT-201ENST00000628509 KRTAP5-4Q6L8H1 288 aa3.47□□□□□ -1.85
FOXCUT-201ENST00000628509 SPRR5A0A1B0GTR4 108 aa3.46□□□□□ -1.86
FOXCUT-201ENST00000628509 SPRR2DP22532 72 aa3.45□□□□□ -1.86
FOXCUT-201ENST00000628509 MUC12Q9UKN1 5478 aa3.45□□□□□ -1.86
FOXCUT-201ENST00000628509 KRTAP4-4Q9BYR3 166 aa3.44□□□□□ -1.86
FOXCUT-201ENST00000628509 KRTAP9-6A8MVA2 160 aa3.31□□□□□ -1.88
FOXCUT-201ENST00000628509 KRTAP2-3P0C7H8 128 aa3.3□□□□□ -1.88
FOXCUT-201ENST00000628509 KRTAP2-4Q9BYR9 128 aa3.3□□□□□ -1.88
FOXCUT-201ENST00000628509 KRTAP4-3Q9BYR4 195 aa3.28□□□□□ -1.88
FOXCUT-201ENST00000628509 MDN1Q9NU22 5596 aa3.27□□□□□ -1.89
FOXCUT-201ENST00000628509 KRTAP2-1Q9BYU5 128 aa3.21□□□□□ -1.9
FOXCUT-201ENST00000628509 NDUFAF8A1L188 74 aa3.19□□□□□ -1.9
FOXCUT-201ENST00000628509 DSTQ03001 7570 aaKnown RBP3.16□□□□□ -1.9
FOXCUT-201ENST00000628509 AHNAK2Q8IVF2 5795 aa3.14□□□□□ -1.91
FOXCUT-201ENST00000628509 OBSCNQ5VST9 7968 aa3.14□□□□□ -1.91
FOXCUT-201ENST00000628509 MT1AP04731 61 aa3.11□□□□□ -1.91
FOXCUT-201ENST00000628509 KRTAP5-5Q701N2 237 aaPredicted RBP3.11□□□□□ -1.91
FOXCUT-201ENST00000628509 KRTAP12-4P60329 112 aa3.08□□□□□ -1.92
FOXCUT-201ENST00000628509 LCE1FQ5T754 118 aa3.03□□□□□ -1.92
FOXCUT-201ENST00000628509 KRTAP6-1Q3LI64 71 aa2.99□□□□□ -1.93
FOXCUT-201ENST00000628509 KRTAP5-7Q6L8G8 165 aa2.94□□□□□ -1.94
FOXCUT-201ENST00000628509 MT4P47944 62 aa2.93□□□□□ -1.94
FOXCUT-201ENST00000628509 KRTAP5-10Q6L8G5 202 aa2.92□□□□□ -1.94
FOXCUT-201ENST00000628509 KRTAP5-2Q701N4 177 aa2.89□□□□□ -1.95
FOXCUT-201ENST00000628509 HMCN1Q96RW7 5635 aa2.87□□□□□ -1.95
FOXCUT-201ENST00000628509 AHNAKQ09666 5890 aaKnown RBP2.86□□□□□ -1.95
FOXCUT-201ENST00000628509 KRTAP20-2Q3LI61 65 aa2.85□□□□□ -1.95
FOXCUT-201ENST00000628509 SYNE1Q8NF91 8797 aaKnown RBP2.8□□□□□ -1.96
FOXCUT-201ENST00000628509 KRTAP6-2Q3LI66 62 aa2.79□□□□□ -1.96
FOXCUT-201ENST00000628509 INE1O15225 51 aa2.78□□□□□ -1.96
FOXCUT-201ENST00000628509 MUC5BQ9HC84 5762 aaPredicted RBP2.77□□□□□ -1.97
FOXCUT-201ENST00000628509 LCE3DQ9BYE3 92 aa2.7□□□□□ -1.98
FOXCUT-201ENST00000628509 LCE3EQ5T5B0 92 aa2.64□□□□□ -1.99
FOXCUT-201ENST00000628509 MUC5ACP98088 5654 aa2.64□□□□□ -1.99
FOXCUT-201ENST00000628509 LCE1CQ5T751 118 aa2.49□□□□□ -2.01
FOXCUT-201ENST00000628509 LCE1BQ5T7P3 118 aa2.49□□□□□ -2.01
FOXCUT-201ENST00000628509 KRTAP5-8O75690 187 aa2.44□□□□□ -2.02
FOXCUT-201ENST00000628509 PRM1P04553 51 aa2.18□□□□□ -2.06
FOXCUT-201ENST00000628509 MUC19Q7Z5P9 8384 aa2.08□□□□□ -2.08
FOXCUT-201ENST00000628509 KRTAP21-2Q3LI59 83 aa1.95□□□□□ -2.1
FOXCUT-201ENST00000628509 PHGR1C9JFL3 82 aa1.74□□□□□ -2.13
FOXCUT-201ENST00000628509 KRTAP21-1Q3LI58 79 aa1.34□□□□□ -2.19
FOXCUT-201ENST00000628509 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 48.2 ms