RNA–Protein interactions for RNA: ENST00000627864.1

MECP2-216, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3

Gene MECP2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-216ENST00000627864 SPRR2DP22532 72 aa6.79□□□□□ -1.32
MECP2-216ENST00000627864 KRTAP19-3Q7Z4W3 81 aa6.79□□□□□ -1.32
MECP2-216ENST00000627864 LCE5AQ5TCM9 118 aa6.73□□□□□ -1.33
MECP2-216ENST00000627864 MT1LQ93083 61 aa6.73□□□□□ -1.33
MECP2-216ENST00000627864 KRTAP20-1Q3LI63 56 aa6.71□□□□□ -1.34
MECP2-216ENST00000627864 PP632Q6XCG6 107 aa6.71□□□□□ -1.34
MECP2-216ENST00000627864 MT1GP13640 62 aa6.69□□□□□ -1.34
MECP2-216ENST00000627864 PMAIP1Q13794 54 aa6.68□□□□□ -1.34
MECP2-216ENST00000627864 KRTAP2-3P0C7H8 128 aa6.66□□□□□ -1.34
MECP2-216ENST00000627864 KRTAP2-4Q9BYR9 128 aa6.66□□□□□ -1.34
MECP2-216ENST00000627864 MT1MQ8N339 61 aa6.59□□□□□ -1.35
MECP2-216ENST00000627864 PRO0628Q9UI54 55 aa6.58□□□□□ -1.36
MECP2-216ENST00000627864 LCE3BQ5TA77 95 aa6.56□□□□□ -1.36
MECP2-216ENST00000627864 KRTAP15-1Q3LI76 137 aa6.53□□□□□ -1.36
MECP2-216ENST00000627864 KRTAP2-2Q9BYT5 123 aa6.47□□□□□ -1.37
MECP2-216ENST00000627864 KRTAP2-1Q9BYU5 128 aa6.47□□□□□ -1.37
MECP2-216ENST00000627864 KRTAP4-7Q9BYR0 210 aa6.45□□□□□ -1.38
MECP2-216ENST00000627864 KRTAP4-3Q9BYR4 195 aa6.45□□□□□ -1.38
MECP2-216ENST00000627864 KRTAP19-4Q3LI73 84 aa6.42□□□□□ -1.38
MECP2-216ENST00000627864 LCE3CQ5T5A8 94 aa6.33□□□□□ -1.4
MECP2-216ENST00000627864 PRAC1Q96KF2 57 aa6.32□□□□□ -1.4
MECP2-216ENST00000627864 DSTQ03001 7570 aaKnown RBP6.3□□□□□ -1.4
MECP2-216ENST00000627864 H3BS24 57 aa6.22□□□□□ -1.41
MECP2-216ENST00000627864 KTN1-AS1Q86SY8 53 aa6.18□□□□□ -1.42
MECP2-216ENST00000627864 LOC100996750A0A140TA64 210 aa6.08□□□□□ -1.44
MECP2-216ENST00000627864 LCE4AQ5TA78 99 aa6.01□□□□□ -1.45
MECP2-216ENST00000627864 KRTAP4-9Q9BYQ8 210 aa5.99□□□□□ -1.45
MECP2-216ENST00000627864 KRTAP5-4Q6L8H1 288 aa5.97□□□□□ -1.45
MECP2-216ENST00000627864 KRTAP5-5Q701N2 237 aaPredicted RBP5.96□□□□□ -1.46
MECP2-216ENST00000627864 KRTAP9-6A8MVA2 160 aa5.95□□□□□ -1.46
MECP2-216ENST00000627864 A0A0A0MQY5 61 aa5.91□□□□□ -1.46
MECP2-216ENST00000627864 MT4P47944 62 aa5.91□□□□□ -1.46
MECP2-216ENST00000627864 LCE1DQ5T752 114 aa5.89□□□□□ -1.47
MECP2-216ENST00000627864 KRTAP4-6Q9BYQ5 205 aa5.78□□□□□ -1.48
MECP2-216ENST00000627864 MT1AP04731 61 aa5.74□□□□□ -1.49
MECP2-216ENST00000627864 KRTAP12-4P60329 112 aa5.72□□□□□ -1.49
MECP2-216ENST00000627864 SPRR5A0A1B0GTR4 108 aa5.68□□□□□ -1.5
MECP2-216ENST00000627864 KRTAP6-1Q3LI64 71 aa5.68□□□□□ -1.5
MECP2-216ENST00000627864 HMCN1Q96RW7 5635 aa5.63□□□□□ -1.51
MECP2-216ENST00000627864 KRTAP20-2Q3LI61 65 aa5.62□□□□□ -1.51
MECP2-216ENST00000627864 SYNE1Q8NF91 8797 aaKnown RBP5.59□□□□□ -1.51
MECP2-216ENST00000627864 KRTAP9-4Q9BYQ2 154 aa5.5□□□□□ -1.53
MECP2-216ENST00000627864 KRTAP5-3Q6L8H2 238 aa5.43□□□□□ -1.54
MECP2-216ENST00000627864 KRTAP6-2Q3LI66 62 aa5.33□□□□□ -1.56
MECP2-216ENST00000627864 KRTAP5-2Q701N4 177 aa5.31□□□□□ -1.56
MECP2-216ENST00000627864 AHNAK2Q8IVF2 5795 aa5.28□□□□□ -1.56
MECP2-216ENST00000627864 LUZP6Q538Z0 58 aa5.24□□□□□ -1.57
MECP2-216ENST00000627864 MT3P25713 68 aa5.23□□□□□ -1.57
MECP2-216ENST00000627864 KRTAP5-10Q6L8G5 202 aa5.19□□□□□ -1.58
MECP2-216ENST00000627864 GPR98Q8WXG9 6306 aa5.16□□□□□ -1.58
MECP2-216ENST00000627864 KRTAP4-11Q9BYQ6 195 aa5.01□□□□□ -1.61
MECP2-216ENST00000627864 KRTAP5-7Q6L8G8 165 aa4.93□□□□□ -1.62
MECP2-216ENST00000627864 KRTAP5-8O75690 187 aa4.83□□□□□ -1.64
MECP2-216ENST00000627864 OBSCNQ5VST9 7968 aa4.76□□□□□ -1.65
MECP2-216ENST00000627864 NDUFAF8A1L188 74 aa4.71□□□□□ -1.66
MECP2-216ENST00000627864 KRTAP5-1Q6L8H4 278 aa4.67□□□□□ -1.66
MECP2-216ENST00000627864 LCE3DQ9BYE3 92 aa4.66□□□□□ -1.66
MECP2-216ENST00000627864 LCE1EQ5T753 118 aa4.65□□□□□ -1.67
MECP2-216ENST00000627864 KRTAP9-9Q9BYP9 154 aa4.5□□□□□ -1.69
MECP2-216ENST00000627864 LCE3EQ5T5B0 92 aa4.47□□□□□ -1.69
MECP2-216ENST00000627864 MUC5ACP98088 5654 aa4.43□□□□□ -1.7
MECP2-216ENST00000627864 LCE1BQ5T7P3 118 aa4.4□□□□□ -1.71
MECP2-216ENST00000627864 KRTAP4-2Q9BYR5 136 aa4.36□□□□□ -1.71
MECP2-216ENST00000627864 LCE1CQ5T751 118 aa4.32□□□□□ -1.72
MECP2-216ENST00000627864 MUC5BQ9HC84 5762 aaPredicted RBP4.23□□□□□ -1.73
MECP2-216ENST00000627864 AHNAKQ09666 5890 aaKnown RBP4.16□□□□□ -1.74
MECP2-216ENST00000627864 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.98□□□□□ -1.77
MECP2-216ENST00000627864 KRTAP5-11Q6L8G4 156 aa3.86□□□□□ -1.79
MECP2-216ENST00000627864 INE1O15225 51 aa3.84□□□□□ -1.79
MECP2-216ENST00000627864 KRTAP4-12Q9BQ66 201 aa3.82□□□□□ -1.8
MECP2-216ENST00000627864 KRTAP21-2Q3LI59 83 aa3.72□□□□□ -1.81
MECP2-216ENST00000627864 PRM1P04553 51 aa3.64□□□□□ -1.83
MECP2-216ENST00000627864 LCE1FQ5T754 118 aa3.64□□□□□ -1.83
MECP2-216ENST00000627864 KRTAP4-4Q9BYR3 166 aa3.38□□□□□ -1.87
MECP2-216ENST00000627864 PHGR1C9JFL3 82 aa3.33□□□□□ -1.88
MECP2-216ENST00000627864 MUC19Q7Z5P9 8384 aa2.9□□□□□ -1.94
MECP2-216ENST00000627864 KRTAP21-1Q3LI58 79 aa2.27□□□□□ -2.05
MECP2-216ENST00000627864 MUC16Q8WXI7 14507 aa2.12□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 112.4 ms