RNA–Protein interactions for RNA: ENST00000627490.2

PBX1-222, Transcript of PBX homeobox 1, humanhuman

TSL 2 BASIC

Gene PBX1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-222ENST00000627490 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.1□□□□□ -1.27
PBX1-222ENST00000627490 KRTAP9-6A8MVA2 160 aa7□□□□□ -1.29
PBX1-222ENST00000627490 KRTAP5-9P26371 169 aa6.99□□□□□ -1.29
PBX1-222ENST00000627490 MT1LQ93083 61 aa6.97□□□□□ -1.29
PBX1-222ENST00000627490 MT1EP04732 61 aa6.97□□□□□ -1.29
PBX1-222ENST00000627490 KRTAP2-3P0C7H8 128 aa6.94□□□□□ -1.3
PBX1-222ENST00000627490 KRTAP2-4Q9BYR9 128 aa6.94□□□□□ -1.3
PBX1-222ENST00000627490 KRTAP2-1Q9BYU5 128 aa6.94□□□□□ -1.3
PBX1-222ENST00000627490 KRTAP6-3Q3LI67 103 aa6.93□□□□□ -1.3
PBX1-222ENST00000627490 SPRR2FQ96RM1 72 aa6.92□□□□□ -1.3
PBX1-222ENST00000627490 SYNE2Q8WXH0 6885 aaKnown RBP6.86□□□□□ -1.31
PBX1-222ENST00000627490 KRTAP4-7Q9BYR0 210 aa6.83□□□□□ -1.32
PBX1-222ENST00000627490 KRTAP19-3Q7Z4W3 81 aa6.74□□□□□ -1.33
PBX1-222ENST00000627490 MUC12Q9UKN1 5478 aa6.7□□□□□ -1.34
PBX1-222ENST00000627490 MT1GP13640 62 aa6.67□□□□□ -1.34
PBX1-222ENST00000627490 LCE1AQ5T7P2 110 aa6.67□□□□□ -1.34
PBX1-222ENST00000627490 LCE5AQ5TCM9 118 aa6.65□□□□□ -1.34
PBX1-222ENST00000627490 SPRR2EP22531 72 aa6.62□□□□□ -1.35
PBX1-222ENST00000627490 SPRR2BP35325 72 aa6.62□□□□□ -1.35
PBX1-222ENST00000627490 SPRR2AP35326 72 aa6.62□□□□□ -1.35
PBX1-222ENST00000627490 MT1MQ8N339 61 aa6.57□□□□□ -1.36
PBX1-222ENST00000627490 MDN1Q9NU22 5596 aa6.53□□□□□ -1.36
PBX1-222ENST00000627490 KRTAP4-3Q9BYR4 195 aa6.39□□□□□ -1.39
PBX1-222ENST00000627490 SPRR2DP22532 72 aa6.38□□□□□ -1.39
PBX1-222ENST00000627490 LOC100996750A0A140TA64 210 aa6.37□□□□□ -1.39
PBX1-222ENST00000627490 NEBP20929 6669 aa6.36□□□□□ -1.39
PBX1-222ENST00000627490 KRTAP20-1Q3LI63 56 aa6.26□□□□□ -1.41
PBX1-222ENST00000627490 LCE3BQ5TA77 95 aa6.15□□□□□ -1.43
PBX1-222ENST00000627490 DSTQ03001 7570 aaKnown RBP6.1□□□□□ -1.43
PBX1-222ENST00000627490 KRTAP12-4P60329 112 aa6.04□□□□□ -1.44
PBX1-222ENST00000627490 MT1AP04731 61 aa5.99□□□□□ -1.45
PBX1-222ENST00000627490 KRTAP5-5Q701N2 237 aaPredicted RBP5.98□□□□□ -1.45
PBX1-222ENST00000627490 GPR98Q8WXG9 6306 aa5.96□□□□□ -1.45
PBX1-222ENST00000627490 KRTAP2-2Q9BYT5 123 aa5.94□□□□□ -1.46
PBX1-222ENST00000627490 KRTAP6-1Q3LI64 71 aa5.85□□□□□ -1.47
PBX1-222ENST00000627490 KRTAP5-4Q6L8H1 288 aa5.8□□□□□ -1.48
PBX1-222ENST00000627490 LCE4AQ5TA78 99 aa5.74□□□□□ -1.49
PBX1-222ENST00000627490 LCE3DQ9BYE3 92 aa5.71□□□□□ -1.5
PBX1-222ENST00000627490 KRTAP4-9Q9BYQ8 210 aa5.69□□□□□ -1.5
PBX1-222ENST00000627490 LCE3EQ5T5B0 92 aa5.66□□□□□ -1.5
PBX1-222ENST00000627490 SYNE1Q8NF91 8797 aaKnown RBP5.56□□□□□ -1.52
PBX1-222ENST00000627490 KRTAP9-4Q9BYQ2 154 aa5.55□□□□□ -1.52
PBX1-222ENST00000627490 MT4P47944 62 aa5.5□□□□□ -1.53
PBX1-222ENST00000627490 LCE1DQ5T752 114 aa5.48□□□□□ -1.53
PBX1-222ENST00000627490 KRTAP4-6Q9BYQ5 205 aa5.46□□□□□ -1.54
PBX1-222ENST00000627490 KRTAP20-2Q3LI61 65 aa5.39□□□□□ -1.55
PBX1-222ENST00000627490 MT3P25713 68 aa5.33□□□□□ -1.56
PBX1-222ENST00000627490 PRM1P04553 51 aa5.32□□□□□ -1.56
PBX1-222ENST00000627490 HMCN1Q96RW7 5635 aa5.3□□□□□ -1.56
PBX1-222ENST00000627490 KRTAP6-2Q3LI66 62 aa5.27□□□□□ -1.57
PBX1-222ENST00000627490 KRTAP5-2Q701N4 177 aa5.24□□□□□ -1.57
PBX1-222ENST00000627490 KRTAP5-3Q6L8H2 238 aa5.22□□□□□ -1.57
PBX1-222ENST00000627490 KRTAP5-7Q6L8G8 165 aa4.95□□□□□ -1.62
PBX1-222ENST00000627490 AHNAK2Q8IVF2 5795 aa4.95□□□□□ -1.62
PBX1-222ENST00000627490 KRTAP5-10Q6L8G5 202 aa4.92□□□□□ -1.62
PBX1-222ENST00000627490 OBSCNQ5VST9 7968 aa4.75□□□□□ -1.65
PBX1-222ENST00000627490 KRTAP4-11Q9BYQ6 195 aa4.71□□□□□ -1.66
PBX1-222ENST00000627490 LCE1EQ5T753 118 aa4.65□□□□□ -1.66
PBX1-222ENST00000627490 AHNAKQ09666 5890 aaKnown RBP4.57□□□□□ -1.68
PBX1-222ENST00000627490 KRTAP5-8O75690 187 aa4.55□□□□□ -1.68
PBX1-222ENST00000627490 KRTAP5-1Q6L8H4 278 aa4.53□□□□□ -1.68
PBX1-222ENST00000627490 MUC5BQ9HC84 5762 aaPredicted RBP4.46□□□□□ -1.7
PBX1-222ENST00000627490 LCE1CQ5T751 118 aa4.32□□□□□ -1.72
PBX1-222ENST00000627490 LCE1BQ5T7P3 118 aa4.32□□□□□ -1.72
PBX1-222ENST00000627490 KRTAP4-2Q9BYR5 136 aa4.31□□□□□ -1.72
PBX1-222ENST00000627490 MUC5ACP98088 5654 aa4.3□□□□□ -1.72
PBX1-222ENST00000627490 KRTAP9-9Q9BYP9 154 aa4.13□□□□□ -1.75
PBX1-222ENST00000627490 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.06□□□□□ -1.76
PBX1-222ENST00000627490 KRTAP5-11Q6L8G4 156 aa3.84□□□□□ -1.79
PBX1-222ENST00000627490 KRTAP21-2Q3LI59 83 aa3.81□□□□□ -1.8
PBX1-222ENST00000627490 KRTAP4-12Q9BQ66 201 aa3.59□□□□□ -1.83
PBX1-222ENST00000627490 LCE1FQ5T754 118 aa3.54□□□□□ -1.84
PBX1-222ENST00000627490 KRTAP21-1Q3LI58 79 aa3.44□□□□□ -1.86
PBX1-222ENST00000627490 KRTAP4-4Q9BYR3 166 aa3.3□□□□□ -1.88
PBX1-222ENST00000627490 PHGR1C9JFL3 82 aa3.28□□□□□ -1.88
PBX1-222ENST00000627490 MUC19Q7Z5P9 8384 aa2.85□□□□□ -1.95
PBX1-222ENST00000627490 MUC16Q8WXI7 14507 aa2.1□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 38.5 ms