RNA–Protein interactions for RNA: ENST00000627185.1

CHD2-209, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 3

Gene CHD2, Length 533 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-209ENST00000627185 SPRR5A0A1B0GTR4 108 aa3.55□□□□□ -1.84
CHD2-209ENST00000627185 MT1FP04733 61 aa3.53□□□□□ -1.84
CHD2-209ENST00000627185 M0R2T5 61 aa3.51□□□□□ -1.85
CHD2-209ENST00000627185 KRTAP10-10P60014 251 aa3.49□□□□□ -1.85
CHD2-209ENST00000627185 UBR4Q5T4S7 5183 aa3.47□□□□□ -1.85
CHD2-209ENST00000627185 MT1BP07438 61 aa3.46□□□□□ -1.86
CHD2-209ENST00000627185 LUZP6Q538Z0 58 aa3.46□□□□□ -1.86
CHD2-209ENST00000627185 KRTAP8-1Q8IUC2 63 aa3.46□□□□□ -1.86
CHD2-209ENST00000627185 KRTAP9-6A8MVA2 160 aa3.42□□□□□ -1.86
CHD2-209ENST00000627185 MT1XP80297 61 aa3.42□□□□□ -1.86
CHD2-209ENST00000627185 LCE3AQ5TA76 89 aa3.38□□□□□ -1.87
CHD2-209ENST00000627185 LCE3EQ5T5B0 92 aa3.37□□□□□ -1.87
CHD2-209ENST00000627185 PRO2289Q9P1D8 64 aa3.37□□□□□ -1.87
CHD2-209ENST00000627185 KRTAP12-3P60328 96 aa3.28□□□□□ -1.88
CHD2-209ENST00000627185 KRTAP5-1Q6L8H4 278 aa3.18□□□□□ -1.9
CHD2-209ENST00000627185 KRTAP5-9P26371 169 aa3.16□□□□□ -1.9
CHD2-209ENST00000627185 KRTAP19-5Q3LI72 72 aa3.1□□□□□ -1.91
CHD2-209ENST00000627185 USH2AO75445 5202 aa3.08□□□□□ -1.92
CHD2-209ENST00000627185 INE1O15225 51 aa3.08□□□□□ -1.92
CHD2-209ENST00000627185 KRTAP19-6Q3LI70 58 aa3.06□□□□□ -1.92
CHD2-209ENST00000627185 KRTAP5-4Q6L8H1 288 aa3.06□□□□□ -1.92
CHD2-209ENST00000627185 KRTAP19-7Q3SYF9 63 aa3.05□□□□□ -1.92
CHD2-209ENST00000627185 KRTAP4-4Q9BYR3 166 aa3.04□□□□□ -1.92
CHD2-209ENST00000627185 SSPOA2VEC9 5147 aa3□□□□□ -1.93
CHD2-209ENST00000627185 MT1EP04732 61 aa2.97□□□□□ -1.93
CHD2-209ENST00000627185 MT1LQ93083 61 aa2.97□□□□□ -1.93
CHD2-209ENST00000627185 KRTAP2-3P0C7H8 128 aa2.94□□□□□ -1.94
CHD2-209ENST00000627185 KRTAP2-4Q9BYR9 128 aa2.94□□□□□ -1.94
CHD2-209ENST00000627185 KRTAP2-1Q9BYU5 128 aa2.94□□□□□ -1.94
CHD2-209ENST00000627185 KMT2DO14686 5537 aa2.87□□□□□ -1.95
CHD2-209ENST00000627185 MT1GP13640 62 aa2.84□□□□□ -1.95
CHD2-209ENST00000627185 LCE3DQ9BYE3 92 aa2.83□□□□□ -1.96
CHD2-209ENST00000627185 KRTAP19-3Q7Z4W3 81 aa2.81□□□□□ -1.96
CHD2-209ENST00000627185 OBSCNQ5VST9 7968 aa2.79□□□□□ -1.96
CHD2-209ENST00000627185 MT1MQ8N339 61 aa2.77□□□□□ -1.97
CHD2-209ENST00000627185 FCGBPQ9Y6R7 5405 aaPredicted RBP2.75□□□□□ -1.97
CHD2-209ENST00000627185 KRTAP4-3Q9BYR4 195 aa2.72□□□□□ -1.97
CHD2-209ENST00000627185 KRTAP5-5Q701N2 237 aaPredicted RBP2.71□□□□□ -1.98
CHD2-209ENST00000627185 KRTAP5-2Q701N4 177 aa2.63□□□□□ -1.99
CHD2-209ENST00000627185 MUC12Q9UKN1 5478 aa2.62□□□□□ -1.99
CHD2-209ENST00000627185 SPRR2FQ96RM1 72 aa2.61□□□□□ -1.99
CHD2-209ENST00000627185 MT1AP04731 61 aa2.58□□□□□ -2
CHD2-209ENST00000627185 FSIP2Q5CZC0 6907 aa2.54□□□□□ -2
CHD2-209ENST00000627185 LCE1CQ5T751 118 aa2.52□□□□□ -2.01
CHD2-209ENST00000627185 LCE1BQ5T7P3 118 aa2.52□□□□□ -2.01
CHD2-209ENST00000627185 CRCT1Q9UGL9 99 aa2.51□□□□□ -2.01
CHD2-209ENST00000627185 MACF1Q9UPN3 7388 aaKnown RBP2.47□□□□□ -2.01
CHD2-209ENST00000627185 KRTAP12-4P60329 112 aa2.46□□□□□ -2.02
CHD2-209ENST00000627185 KRTAP6-1Q3LI64 71 aa2.45□□□□□ -2.02
CHD2-209ENST00000627185 MDN1Q9NU22 5596 aa2.44□□□□□ -2.02
CHD2-209ENST00000627185 KRTAP6-3Q3LI67 103 aa2.43□□□□□ -2.02
CHD2-209ENST00000627185 SPRR2EP22531 72 aa2.4□□□□□ -2.03
CHD2-209ENST00000627185 SPRR2BP35325 72 aa2.4□□□□□ -2.03
CHD2-209ENST00000627185 SPRR2AP35326 72 aa2.4□□□□□ -2.03
CHD2-209ENST00000627185 DSTQ03001 7570 aaKnown RBP2.34□□□□□ -2.04
CHD2-209ENST00000627185 KRTAP5-8O75690 187 aa2.33□□□□□ -2.04
CHD2-209ENST00000627185 SPRR2DP22532 72 aa2.32□□□□□ -2.04
CHD2-209ENST00000627185 SYNE2Q8WXH0 6885 aaKnown RBP2.29□□□□□ -2.04
CHD2-209ENST00000627185 SYNE1Q8NF91 8797 aaKnown RBP2.28□□□□□ -2.04
CHD2-209ENST00000627185 KRTAP6-2Q3LI66 62 aa2.19□□□□□ -2.06
CHD2-209ENST00000627185 NEBP20929 6669 aa2.14□□□□□ -2.07
CHD2-209ENST00000627185 PRM1P04553 51 aa2.13□□□□□ -2.07
CHD2-209ENST00000627185 KRTAP5-7Q6L8G8 165 aa2.11□□□□□ -2.07
CHD2-209ENST00000627185 KRTAP20-2Q3LI61 65 aa2.07□□□□□ -2.08
CHD2-209ENST00000627185 KRTAP20-1Q3LI63 56 aa2.03□□□□□ -2.08
CHD2-209ENST00000627185 MUC19Q7Z5P9 8384 aa1.99□□□□□ -2.09
CHD2-209ENST00000627185 HMCN1Q96RW7 5635 aa1.96□□□□□ -2.1
CHD2-209ENST00000627185 MT4P47944 62 aa1.93□□□□□ -2.1
CHD2-209ENST00000627185 MUC5ACP98088 5654 aa1.86□□□□□ -2.11
CHD2-209ENST00000627185 KRTAP5-10Q6L8G5 202 aa1.86□□□□□ -2.11
CHD2-209ENST00000627185 KRTAP21-2Q3LI59 83 aa1.77□□□□□ -2.13
CHD2-209ENST00000627185 AHNAK2Q8IVF2 5795 aa1.61□□□□□ -2.15
CHD2-209ENST00000627185 KRTAP21-1Q3LI58 79 aa1.45□□□□□ -2.18
CHD2-209ENST00000627185 MUC5BQ9HC84 5762 aaPredicted RBP1.45□□□□□ -2.18
CHD2-209ENST00000627185 GPR98Q8WXG9 6306 aa1.36□□□□□ -2.19
CHD2-209ENST00000627185 PHGR1C9JFL3 82 aa1.35□□□□□ -2.19
CHD2-209ENST00000627185 AHNAKQ09666 5890 aaKnown RBP1.14□□□□□ -2.23
CHD2-209ENST00000627185 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 28.3 ms