RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 SEC61GP60059 68 aa3.62□□□□□ -1.83
DDX41-218ENST00000625286 SYNE1Q8NF91 8797 aaKnown RBP3.6□□□□□ -1.83
DDX41-218ENST00000625286 TNP1P09430 55 aa3.6□□□□□ -1.83
DDX41-218ENST00000625286 AHNAKQ09666 5890 aaKnown RBP3.58□□□□□ -1.84
DDX41-218ENST00000625286 LOC100996750A0A140TA64 210 aa3.58□□□□□ -1.84
DDX41-218ENST00000625286 KRTAP12-3P60328 96 aa3.58□□□□□ -1.84
DDX41-218ENST00000625286 SERP2Q8N6R1 65 aa3.57□□□□□ -1.84
DDX41-218ENST00000625286 KRTAP12-4P60329 112 aa3.56□□□□□ -1.84
DDX41-218ENST00000625286 SMIM26A0A096LP01 95 aa3.52□□□□□ -1.85
DDX41-218ENST00000625286 MUC5ACP98088 5654 aa3.5□□□□□ -1.85
DDX41-218ENST00000625286 K7ERU9 68 aa3.48□□□□□ -1.85
DDX41-218ENST00000625286 KRTAP4-11Q9BYQ6 195 aa3.47□□□□□ -1.85
DDX41-218ENST00000625286 A0A1B0GU69 56 aa3.46□□□□□ -1.86
DDX41-218ENST00000625286 MUC5BQ9HC84 5762 aaPredicted RBP3.43□□□□□ -1.86
DDX41-218ENST00000625286 H7BZZ5 65 aa3.43□□□□□ -1.86
DDX41-218ENST00000625286 KRTAP5-2Q701N4 177 aa3.41□□□□□ -1.86
DDX41-218ENST00000625286 KRTAP5-8O75690 187 aa3.38□□□□□ -1.87
DDX41-218ENST00000625286 COX7CP15954 63 aa3.38□□□□□ -1.87
DDX41-218ENST00000625286 KRTAP6-1Q3LI64 71 aa3.35□□□□□ -1.87
DDX41-218ENST00000625286 MT1AP04731 61 aa3.3□□□□□ -1.88
DDX41-218ENST00000625286 LCE3CQ5T5A8 94 aa3.29□□□□□ -1.88
DDX41-218ENST00000625286 KRTAP19-4Q3LI73 84 aa3.28□□□□□ -1.88
DDX41-218ENST00000625286 OBSCNQ5VST9 7968 aa3.28□□□□□ -1.88
DDX41-218ENST00000625286 KRTAP25-1Q3LHN0 102 aa3.26□□□□□ -1.89
DDX41-218ENST00000625286 KRTAP15-1Q3LI76 137 aa3.25□□□□□ -1.89
DDX41-218ENST00000625286 KRTAP9-4Q9BYQ2 154 aa3.24□□□□□ -1.89
DDX41-218ENST00000625286 KRTAP6-2Q3LI66 62 aa3.23□□□□□ -1.89
DDX41-218ENST00000625286 LINC01558Q9Y6Z2 57 aa3.22□□□□□ -1.89
DDX41-218ENST00000625286 PRR15LQ9BU68 103 aa3.21□□□□□ -1.9
DDX41-218ENST00000625286 KRTAP9-6A8MVA2 160 aa3.2□□□□□ -1.9
DDX41-218ENST00000625286 KRTAP9-9Q9BYP9 154 aa3.2□□□□□ -1.9
DDX41-218ENST00000625286 UQCR11O14957 56 aa3.15□□□□□ -1.91
DDX41-218ENST00000625286 KRTAP23-1A1A580 65 aa3.13□□□□□ -1.91
DDX41-218ENST00000625286 ANAPC13Q9BS18 74 aa3.13□□□□□ -1.91
DDX41-218ENST00000625286 KRTAP5-1Q6L8H4 278 aa3.12□□□□□ -1.91
DDX41-218ENST00000625286 CCDC179H3BU77 68 aa3.11□□□□□ -1.91
DDX41-218ENST00000625286 MIR22HGQ0VDD5 57 aa3.07□□□□□ -1.92
DDX41-218ENST00000625286 ATP5EP56381 51 aaPredicted RBP3.03□□□□□ -1.92
DDX41-218ENST00000625286 MT3P25713 68 aa3.01□□□□□ -1.93
DDX41-218ENST00000625286 K7ERS5 55 aa2.96□□□□□ -1.94
DDX41-218ENST00000625286 TMEM258P61165 79 aa2.94□□□□□ -1.94
DDX41-218ENST00000625286 PSPHP1O15172 72 aa2.89□□□□□ -1.95
DDX41-218ENST00000625286 Q1T7F1 81 aa2.87□□□□□ -1.95
DDX41-218ENST00000625286 RPS28P62857 69 aaKnown RBP2.86□□□□□ -1.95
DDX41-218ENST00000625286 LCE1EQ5T753 118 aa2.84□□□□□ -1.95
DDX41-218ENST00000625286 CDC42SE1Q9NRR8 79 aa2.83□□□□□ -1.96
DDX41-218ENST00000625286 ROMO1P60602 79 aa2.8□□□□□ -1.96
DDX41-218ENST00000625286 PCP4P48539 62 aa2.77□□□□□ -1.97
DDX41-218ENST00000625286 KRTAP4-2Q9BYR5 136 aa2.76□□□□□ -1.97
DDX41-218ENST00000625286 V9GYY9 64 aa2.75□□□□□ -1.97
DDX41-218ENST00000625286 A6NED7 52 aa2.71□□□□□ -1.98
DDX41-218ENST00000625286 LCE1BQ5T7P3 118 aa2.7□□□□□ -1.98
DDX41-218ENST00000625286 LCE1CQ5T751 118 aa2.65□□□□□ -1.99
DDX41-218ENST00000625286 KRTAP4-12Q9BQ66 201 aa2.61□□□□□ -1.99
DDX41-218ENST00000625286 KRTAP5-11Q6L8G4 156 aa2.45□□□□□ -2.02
DDX41-218ENST00000625286 PHGR1C9JFL3 82 aa2.39□□□□□ -2.03
DDX41-218ENST00000625286 BRK1Q8WUW1 75 aa2.39□□□□□ -2.03
DDX41-218ENST00000625286 LCE1FQ5T754 118 aa2.38□□□□□ -2.03
DDX41-218ENST00000625286 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.38□□□□□ -2.03
DDX41-218ENST00000625286 LCE3DQ9BYE3 92 aa2.29□□□□□ -2.04
DDX41-218ENST00000625286 PMAIP1Q13794 54 aa2.25□□□□□ -2.05
DDX41-218ENST00000625286 KRTAP21-2Q3LI59 83 aa2.22□□□□□ -2.05
DDX41-218ENST00000625286 PRAC1Q96KF2 57 aa2.17□□□□□ -2.06
DDX41-218ENST00000625286 PRO0628Q9UI54 55 aa2.14□□□□□ -2.07
DDX41-218ENST00000625286 LCE3EQ5T5B0 92 aa2.1□□□□□ -2.07
DDX41-218ENST00000625286 KRTAP4-4Q9BYR3 166 aa2.09□□□□□ -2.07
DDX41-218ENST00000625286 KTN1-AS1Q86SY8 53 aa2.03□□□□□ -2.08
DDX41-218ENST00000625286 MUC19Q7Z5P9 8384 aa2.02□□□□□ -2.09
DDX41-218ENST00000625286 SVIPQ8NHG7 77 aa1.94□□□□□ -2.1
DDX41-218ENST00000625286 KRTAP21-1Q3LI58 79 aa1.79□□□□□ -2.12
DDX41-218ENST00000625286 LUZP6Q538Z0 58 aa1.76□□□□□ -2.13
DDX41-218ENST00000625286 NDUFAF8A1L188 74 aa1.53□□□□□ -2.16
DDX41-218ENST00000625286 MUC16Q8WXI7 14507 aa1.45□□□□□ -2.18
DDX41-218ENST00000625286 PRM1P04553 51 aa1.44□□□□□ -2.18
DDX41-218ENST00000625286 A0A0A0MQY5 61 aa1.33□□□□□ -2.2
DDX41-218ENST00000625286 INE1O15225 51 aa1.25□□□□□ -2.21
DDX41-218ENST00000625286 H3BS24 57 aa1.04□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 158.3 ms