RNA–Protein interactions for RNA: ENST00000624138.3

LINC00963-218, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 261 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-218ENST00000624138 RPS28P62857 69 aaKnown RBP2.4□□□□□ -2.03
LINC00963-218ENST00000624138 KRTAP4-2Q9BYR5 136 aa2.4□□□□□ -2.03
LINC00963-218ENST00000624138 SYNE1Q8NF91 8797 aaKnown RBP2.39□□□□□ -2.03
LINC00963-218ENST00000624138 MUC5BQ9HC84 5762 aaPredicted RBP2.39□□□□□ -2.03
LINC00963-218ENST00000624138 A6NED7 52 aa2.39□□□□□ -2.03
LINC00963-218ENST00000624138 KRTAP5-8O75690 187 aa2.39□□□□□ -2.03
LINC00963-218ENST00000624138 LINC00208Q96KT6 92 aa2.39□□□□□ -2.03
LINC00963-218ENST00000624138 HIST1H4AP62805 103 aaKnown RBP2.38□□□□□ -2.03
LINC00963-218ENST00000624138 DMAC1Q96GE9 116 aa2.38□□□□□ -2.03
LINC00963-218ENST00000624138 KTN1-AS1Q86SY8 53 aa2.37□□□□□ -2.03
LINC00963-218ENST00000624138 PRO0461Q9UI25 63 aa2.37□□□□□ -2.03
LINC00963-218ENST00000624138 KRTAP13-4Q3LI77 160 aa2.36□□□□□ -2.03
LINC00963-218ENST00000624138 COL5A1-AS1Q5SY13 56 aa2.36□□□□□ -2.03
LINC00963-218ENST00000624138 TRAV7A0A075B6U4 112 aa2.33□□□□□ -2.04
LINC00963-218ENST00000624138 C10orf95Q9H7T3 257 aa2.33□□□□□ -2.04
LINC00963-218ENST00000624138 KRTAP5-2Q701N4 177 aa2.32□□□□□ -2.04
LINC00963-218ENST00000624138 ETDBQ3ZM63 59 aa2.3□□□□□ -2.04
LINC00963-218ENST00000624138 H3BPC8 53 aa2.29□□□□□ -2.04
LINC00963-218ENST00000624138 LCE3AQ5TA76 89 aa2.29□□□□□ -2.04
LINC00963-218ENST00000624138 GTF2H5Q6ZYL4 71 aa2.29□□□□□ -2.04
LINC00963-218ENST00000624138 SPTSSBQ8NFR3 76 aa2.29□□□□□ -2.04
LINC00963-218ENST00000624138 A0A1B0GV90 55 aa2.28□□□□□ -2.04
LINC00963-218ENST00000624138 SPINT4Q6UDR6 99 aa2.28□□□□□ -2.04
LINC00963-218ENST00000624138 A0A1B0GU33 70 aa2.27□□□□□ -2.05
LINC00963-218ENST00000624138 F8W1H4 67 aa2.26□□□□□ -2.05
LINC00963-218ENST00000624138 ACYP2P14621 99 aa2.26□□□□□ -2.05
LINC00963-218ENST00000624138 J3QR89 54 aa2.24□□□□□ -2.05
LINC00963-218ENST00000624138 ATP5EP2Q5VTU8 51 aa2.24□□□□□ -2.05
LINC00963-218ENST00000624138 K7ERU9 68 aa2.22□□□□□ -2.05
LINC00963-218ENST00000624138 OBSCNQ5VST9 7968 aa2.22□□□□□ -2.05
LINC00963-218ENST00000624138 KRTAP25-1Q3LHN0 102 aa2.21□□□□□ -2.06
LINC00963-218ENST00000624138 BRK1Q8WUW1 75 aa2.2□□□□□ -2.06
LINC00963-218ENST00000624138 KRTAP12-3P60328 96 aa2.19□□□□□ -2.06
LINC00963-218ENST00000624138 KRTAP12-1P59990 96 aa2.18□□□□□ -2.06
LINC00963-218ENST00000624138 A8MU10 97 aa2.17□□□□□ -2.06
LINC00963-218ENST00000624138 TNP1P09430 55 aa2.17□□□□□ -2.06
LINC00963-218ENST00000624138 CHKB-CPT1BH3BT56 60 aa2.16□□□□□ -2.06
LINC00963-218ENST00000624138 MT1AP04731 61 aa2.15□□□□□ -2.07
LINC00963-218ENST00000624138 KRTAP6-1Q3LI64 71 aa2.15□□□□□ -2.07
LINC00963-218ENST00000624138 KRTAP5-1Q6L8H4 278 aa2.15□□□□□ -2.07
LINC00963-218ENST00000624138 LINC00643Q86TS7 51 aa2.15□□□□□ -2.07
LINC00963-218ENST00000624138 TMEM258P61165 79 aa2.14□□□□□ -2.07
LINC00963-218ENST00000624138 SPATA8Q6RVD6 105 aa2.13□□□□□ -2.07
LINC00963-218ENST00000624138 KRTAP6-2Q3LI66 62 aa2.12□□□□□ -2.07
LINC00963-218ENST00000624138 LCE1FQ5T754 118 aa2.1□□□□□ -2.07
LINC00963-218ENST00000624138 ROMO1P60602 79 aa2.09□□□□□ -2.07
LINC00963-218ENST00000624138 SERP1Q9Y6X1 66 aa2.04□□□□□ -2.08
LINC00963-218ENST00000624138 SNURFQ9Y675 71 aa2.02□□□□□ -2.09
LINC00963-218ENST00000624138 LCE3CQ5T5A8 94 aa2□□□□□ -2.09
LINC00963-218ENST00000624138 CCDC179H3BU77 68 aa1.99□□□□□ -2.09
LINC00963-218ENST00000624138 Q1T7F1 81 aa1.97□□□□□ -2.09
LINC00963-218ENST00000624138 SERP2Q8N6R1 65 aa1.97□□□□□ -2.09
LINC00963-218ENST00000624138 MIR22HGQ0VDD5 57 aa1.95□□□□□ -2.1
LINC00963-218ENST00000624138 COX7CP15954 63 aa1.93□□□□□ -2.1
LINC00963-218ENST00000624138 LCE1EQ5T753 118 aa1.92□□□□□ -2.1
LINC00963-218ENST00000624138 COA5Q86WW8 74 aa1.92□□□□□ -2.1
LINC00963-218ENST00000624138 KRTAP9-6A8MVA2 160 aa1.91□□□□□ -2.1
LINC00963-218ENST00000624138 H7BZZ5 65 aa1.91□□□□□ -2.1
LINC00963-218ENST00000624138 ATP5EP56381 51 aaPredicted RBP1.87□□□□□ -2.11
LINC00963-218ENST00000624138 CDC42SE1Q9NRR8 79 aa1.84□□□□□ -2.11
LINC00963-218ENST00000624138 A0A1B0GU69 56 aa1.83□□□□□ -2.12
LINC00963-218ENST00000624138 INE1O15225 51 aa1.8□□□□□ -2.12
LINC00963-218ENST00000624138 LCE1BQ5T7P3 118 aa1.79□□□□□ -2.12
LINC00963-218ENST00000624138 LCE1CQ5T751 118 aa1.78□□□□□ -2.12
LINC00963-218ENST00000624138 LCE3EQ5T5B0 92 aa1.76□□□□□ -2.13
LINC00963-218ENST00000624138 LINC01558Q9Y6Z2 57 aa1.74□□□□□ -2.13
LINC00963-218ENST00000624138 KRTAP5-11Q6L8G4 156 aa1.73□□□□□ -2.13
LINC00963-218ENST00000624138 PRR15LQ9BU68 103 aa1.72□□□□□ -2.13
LINC00963-218ENST00000624138 PHGR1C9JFL3 82 aa1.69□□□□□ -2.14
LINC00963-218ENST00000624138 UQCR11O14957 56 aa1.66□□□□□ -2.14
LINC00963-218ENST00000624138 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.63□□□□□ -2.15
LINC00963-218ENST00000624138 LCE3DQ9BYE3 92 aa1.58□□□□□ -2.16
LINC00963-218ENST00000624138 KRTAP21-2Q3LI59 83 aa1.44□□□□□ -2.18
LINC00963-218ENST00000624138 MUC19Q7Z5P9 8384 aa1.38□□□□□ -2.19
LINC00963-218ENST00000624138 KRTAP4-4Q9BYR3 166 aa1.35□□□□□ -2.19
LINC00963-218ENST00000624138 KRTAP21-1Q3LI58 79 aa1.3□□□□□ -2.2
LINC00963-218ENST00000624138 MUC16Q8WXI7 14507 aa0.95□□□□□ -2.26
LINC00963-218ENST00000624138 PRM1P04553 51 aa0.81□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 67.6 ms