RNA–Protein interactions for RNA: ENST00000621813.4

TRA2A-212, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRA2A, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-212ENST00000621813 KRTAP9-6A0A140TA67 174 aa6.21□□□□□ -1.42
TRA2A-212ENST00000621813 MT1EP04732 61 aa6.13□□□□□ -1.43
TRA2A-212ENST00000621813 LOC100996750A0A140TA64 210 aa6.13□□□□□ -1.43
TRA2A-212ENST00000621813 KRTAP4-6Q9BYQ5 205 aa6.13□□□□□ -1.43
TRA2A-212ENST00000621813 MT1LQ93083 61 aa6.09□□□□□ -1.44
TRA2A-212ENST00000621813 KRTAP9-6A8MVA2 160 aa5.94□□□□□ -1.46
TRA2A-212ENST00000621813 KRTAP4-7Q9BYR0 210 aa5.94□□□□□ -1.46
TRA2A-212ENST00000621813 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.89□□□□□ -1.47
TRA2A-212ENST00000621813 MACF1Q9UPN3 7388 aaKnown RBP5.89□□□□□ -1.47
TRA2A-212ENST00000621813 KRTAP19-3Q7Z4W3 81 aa5.82□□□□□ -1.48
TRA2A-212ENST00000621813 MT1GP13640 62 aa5.82□□□□□ -1.48
TRA2A-212ENST00000621813 MT1MQ8N339 61 aa5.75□□□□□ -1.49
TRA2A-212ENST00000621813 KRTAP6-3Q3LI67 103 aa5.74□□□□□ -1.49
TRA2A-212ENST00000621813 KRTAP5-9P26371 169 aa5.73□□□□□ -1.49
TRA2A-212ENST00000621813 SYNE2Q8WXH0 6885 aaKnown RBP5.72□□□□□ -1.49
TRA2A-212ENST00000621813 SPRR2FQ96RM1 72 aa5.71□□□□□ -1.5
TRA2A-212ENST00000621813 MUC12Q9UKN1 5478 aa5.67□□□□□ -1.5
TRA2A-212ENST00000621813 KRTAP12-4P60329 112 aa5.66□□□□□ -1.5
TRA2A-212ENST00000621813 LCE5AQ5TCM9 118 aa5.66□□□□□ -1.5
TRA2A-212ENST00000621813 KRTAP9-7A8MTY7 169 aa5.64□□□□□ -1.51
TRA2A-212ENST00000621813 KRTAP4-3Q9BYR4 195 aa5.64□□□□□ -1.51
TRA2A-212ENST00000621813 SPRR2EP22531 72 aa5.48□□□□□ -1.53
TRA2A-212ENST00000621813 SPRR2BP35325 72 aa5.48□□□□□ -1.53
TRA2A-212ENST00000621813 SPRR2AP35326 72 aa5.48□□□□□ -1.53
TRA2A-212ENST00000621813 LCE1AQ5T7P2 110 aa5.48□□□□□ -1.53
TRA2A-212ENST00000621813 MDN1Q9NU22 5596 aa5.45□□□□□ -1.54
TRA2A-212ENST00000621813 KRTAP2-2Q9BYT5 123 aa5.44□□□□□ -1.54
TRA2A-212ENST00000621813 NEBP20929 6669 aa5.33□□□□□ -1.56
TRA2A-212ENST00000621813 SPRR2DP22532 72 aa5.29□□□□□ -1.56
TRA2A-212ENST00000621813 DSTQ03001 7570 aaKnown RBP5.27□□□□□ -1.57
TRA2A-212ENST00000621813 LCE3BQ5TA77 95 aa5.24□□□□□ -1.57
TRA2A-212ENST00000621813 KRTAP4-12Q9BQ66 201 aa5.18□□□□□ -1.58
TRA2A-212ENST00000621813 MT1AP04731 61 aa5.17□□□□□ -1.58
TRA2A-212ENST00000621813 KRTAP9-9Q9BYP9 154 aa5.15□□□□□ -1.59
TRA2A-212ENST00000621813 KRTAP9-4Q9BYQ2 154 aa5.15□□□□□ -1.59
TRA2A-212ENST00000621813 KRTAP5-5Q701N2 237 aaPredicted RBP5.14□□□□□ -1.59
TRA2A-212ENST00000621813 PRM1P04553 51 aa5.12□□□□□ -1.59
TRA2A-212ENST00000621813 KRTAP6-1Q3LI64 71 aa5.12□□□□□ -1.59
TRA2A-212ENST00000621813 KRTAP20-1Q3LI63 56 aa5.02□□□□□ -1.61
TRA2A-212ENST00000621813 LCE3EQ5T5B0 92 aa5□□□□□ -1.61
TRA2A-212ENST00000621813 LCE3DQ9BYE3 92 aa4.93□□□□□ -1.62
TRA2A-212ENST00000621813 LCE1DQ5T752 114 aa4.9□□□□□ -1.62
TRA2A-212ENST00000621813 KRTAP4-9Q9BYQ8 210 aa4.86□□□□□ -1.63
TRA2A-212ENST00000621813 SYNE1Q8NF91 8797 aaKnown RBP4.82□□□□□ -1.64
TRA2A-212ENST00000621813 KRTAP4-2Q9BYR5 136 aa4.75□□□□□ -1.65
TRA2A-212ENST00000621813 LCE4AQ5TA78 99 aa4.74□□□□□ -1.65
TRA2A-212ENST00000621813 KRTAP5-4Q6L8H1 288 aa4.74□□□□□ -1.65
TRA2A-212ENST00000621813 LCE1EQ5T753 118 aa4.73□□□□□ -1.65
TRA2A-212ENST00000621813 MT3P25713 68 aa4.67□□□□□ -1.66
TRA2A-212ENST00000621813 KRTAP6-2Q3LI66 62 aa4.66□□□□□ -1.66
TRA2A-212ENST00000621813 KRTAP4-11Q9BYQ6 195 aa4.58□□□□□ -1.68
TRA2A-212ENST00000621813 MT4P47944 62 aa4.56□□□□□ -1.68
TRA2A-212ENST00000621813 HMCN1Q96RW7 5635 aa4.45□□□□□ -1.7
TRA2A-212ENST00000621813 KRTAP20-2Q3LI61 65 aa4.43□□□□□ -1.7
TRA2A-212ENST00000621813 KRTAP5-3Q6L8H2 238 aa4.42□□□□□ -1.7
TRA2A-212ENST00000621813 KRTAP5-2Q701N4 177 aa4.33□□□□□ -1.72
TRA2A-212ENST00000621813 OBSCNQ5VST9 7968 aa4.23□□□□□ -1.73
TRA2A-212ENST00000621813 LCE1FQ5T754 118 aa4.15□□□□□ -1.74
TRA2A-212ENST00000621813 AHNAK2Q8IVF2 5795 aa4.06□□□□□ -1.76
TRA2A-212ENST00000621813 GPR98Q8WXG9 6306 aa4.05□□□□□ -1.76
TRA2A-212ENST00000621813 KRTAP5-10Q6L8G5 202 aa3.87□□□□□ -1.79
TRA2A-212ENST00000621813 MUC5ACP98088 5654 aa3.79□□□□□ -1.8
TRA2A-212ENST00000621813 KRTAP5-8O75690 187 aa3.74□□□□□ -1.81
TRA2A-212ENST00000621813 LCE1BQ5T7P3 118 aa3.7□□□□□ -1.82
TRA2A-212ENST00000621813 KRTAP5-1Q6L8H4 278 aa3.7□□□□□ -1.82
TRA2A-212ENST00000621813 LCE1CQ5T751 118 aa3.69□□□□□ -1.82
TRA2A-212ENST00000621813 KRTAP5-7Q6L8G8 165 aa3.66□□□□□ -1.82
TRA2A-212ENST00000621813 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.5□□□□□ -1.85
TRA2A-212ENST00000621813 KRTAP21-1Q3LI58 79 aa3.43□□□□□ -1.86
TRA2A-212ENST00000621813 KRTAP21-2Q3LI59 83 aa3.34□□□□□ -1.88
TRA2A-212ENST00000621813 MUC5BQ9HC84 5762 aaPredicted RBP3.28□□□□□ -1.88
TRA2A-212ENST00000621813 KRTAP5-11Q6L8G4 156 aa3.21□□□□□ -1.9
TRA2A-212ENST00000621813 AHNAKQ09666 5890 aaKnown RBP3.2□□□□□ -1.9
TRA2A-212ENST00000621813 KRTAP4-4Q9BYR3 166 aa2.92□□□□□ -1.94
TRA2A-212ENST00000621813 MUC19Q7Z5P9 8384 aa2.78□□□□□ -1.96
TRA2A-212ENST00000621813 PHGR1C9JFL3 82 aa2.75□□□□□ -1.97
TRA2A-212ENST00000621813 MUC16Q8WXI7 14507 aa1.86□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 12.8 ms