RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 KRTAP2-3P0C7H8 128 aa5.2□□□□□ -1.58
CBWD3-217ENST00000621474 KRTAP19-3Q7Z4W3 81 aa5.2□□□□□ -1.58
CBWD3-217ENST00000621474 KRTAP2-4Q9BYR9 128 aa5.2□□□□□ -1.58
CBWD3-217ENST00000621474 CDC42SE1Q9NRR8 79 aa5.19□□□□□ -1.58
CBWD3-217ENST00000621474 KRTAP25-1Q3LHN0 102 aa5.19□□□□□ -1.58
CBWD3-217ENST00000621474 DSTQ03001 7570 aaKnown RBP5.15□□□□□ -1.59
CBWD3-217ENST00000621474 MT1LQ93083 61 aa5.12□□□□□ -1.59
CBWD3-217ENST00000621474 MT1GP13640 62 aa5.09□□□□□ -1.59
CBWD3-217ENST00000621474 KRTAP12-3P60328 96 aa5.08□□□□□ -1.6
CBWD3-217ENST00000621474 KRTAP9-9Q9BYP9 154 aa5.08□□□□□ -1.6
CBWD3-217ENST00000621474 KRTAP9-4Q9BYQ2 154 aa5.08□□□□□ -1.6
CBWD3-217ENST00000621474 KRTAP4-12Q9BQ66 201 aa5.08□□□□□ -1.6
CBWD3-217ENST00000621474 KRTAP2-2Q9BYT5 123 aa5.07□□□□□ -1.6
CBWD3-217ENST00000621474 KRTAP2-1Q9BYU5 128 aa5.07□□□□□ -1.6
CBWD3-217ENST00000621474 ROMO1P60602 79 aa5.04□□□□□ -1.6
CBWD3-217ENST00000621474 MT1MQ8N339 61 aa5.04□□□□□ -1.6
CBWD3-217ENST00000621474 KRTAP23-1A1A580 65 aa5.01□□□□□ -1.61
CBWD3-217ENST00000621474 PP632Q6XCG6 107 aa5.01□□□□□ -1.61
CBWD3-217ENST00000621474 KRTAP4-7Q9BYR0 210 aa4.97□□□□□ -1.61
CBWD3-217ENST00000621474 KRTAP4-3Q9BYR4 195 aa4.94□□□□□ -1.62
CBWD3-217ENST00000621474 BRK1Q8WUW1 75 aa4.9□□□□□ -1.63
CBWD3-217ENST00000621474 LCE1DQ5T752 114 aa4.87□□□□□ -1.63
CBWD3-217ENST00000621474 KRTAP15-1Q3LI76 137 aa4.83□□□□□ -1.64
CBWD3-217ENST00000621474 KRTAP4-9Q9BYQ8 210 aa4.78□□□□□ -1.64
CBWD3-217ENST00000621474 KRTAP19-4Q3LI73 84 aa4.76□□□□□ -1.65
CBWD3-217ENST00000621474 KRTAP4-2Q9BYR5 136 aa4.74□□□□□ -1.65
CBWD3-217ENST00000621474 LCE3CQ5T5A8 94 aa4.72□□□□□ -1.65
CBWD3-217ENST00000621474 KRTAP5-4Q6L8H1 288 aa4.67□□□□□ -1.66
CBWD3-217ENST00000621474 LCE4AQ5TA78 99 aa4.64□□□□□ -1.67
CBWD3-217ENST00000621474 KRTAP5-5Q701N2 237 aaPredicted RBP4.63□□□□□ -1.67
CBWD3-217ENST00000621474 PMAIP1Q13794 54 aa4.6□□□□□ -1.67
CBWD3-217ENST00000621474 MT4P47944 62 aa4.58□□□□□ -1.68
CBWD3-217ENST00000621474 KRTAP5-3Q6L8H2 238 aa4.58□□□□□ -1.68
CBWD3-217ENST00000621474 HMCN1Q96RW7 5635 aa4.54□□□□□ -1.68
CBWD3-217ENST00000621474 KRTAP4-11Q9BYQ6 195 aa4.54□□□□□ -1.68
CBWD3-217ENST00000621474 KRTAP9-6A8MVA2 160 aa4.51□□□□□ -1.69
CBWD3-217ENST00000621474 PRO0628Q9UI54 55 aa4.49□□□□□ -1.69
CBWD3-217ENST00000621474 H3BS24 57 aa4.46□□□□□ -1.69
CBWD3-217ENST00000621474 SYNE1Q8NF91 8797 aaKnown RBP4.46□□□□□ -1.7
CBWD3-217ENST00000621474 PRAC1Q96KF2 57 aa4.43□□□□□ -1.7
CBWD3-217ENST00000621474 KRTAP20-2Q3LI61 65 aa4.38□□□□□ -1.71
CBWD3-217ENST00000621474 SPRR5A0A1B0GTR4 108 aa4.36□□□□□ -1.71
CBWD3-217ENST00000621474 MT1AP04731 61 aa4.35□□□□□ -1.71
CBWD3-217ENST00000621474 KRTAP12-4P60329 112 aa4.35□□□□□ -1.71
CBWD3-217ENST00000621474 KRTAP6-1Q3LI64 71 aa4.33□□□□□ -1.72
CBWD3-217ENST00000621474 AHNAK2Q8IVF2 5795 aa4.26□□□□□ -1.73
CBWD3-217ENST00000621474 GPR98Q8WXG9 6306 aa4.24□□□□□ -1.73
CBWD3-217ENST00000621474 KTN1-AS1Q86SY8 53 aa4.24□□□□□ -1.73
CBWD3-217ENST00000621474 KRTAP5-10Q6L8G5 202 aa4.17□□□□□ -1.74
CBWD3-217ENST00000621474 KRTAP5-2Q701N4 177 aa4.14□□□□□ -1.75
CBWD3-217ENST00000621474 KRTAP6-2Q3LI66 62 aa4.07□□□□□ -1.76
CBWD3-217ENST00000621474 A0A0A0MQY5 61 aa4.06□□□□□ -1.76
CBWD3-217ENST00000621474 OBSCNQ5VST9 7968 aa3.97□□□□□ -1.77
CBWD3-217ENST00000621474 KRTAP5-7Q6L8G8 165 aa3.95□□□□□ -1.78
CBWD3-217ENST00000621474 MT3P25713 68 aa3.93□□□□□ -1.78
CBWD3-217ENST00000621474 KRTAP5-8O75690 187 aa3.81□□□□□ -1.8
CBWD3-217ENST00000621474 KRTAP5-1Q6L8H4 278 aa3.68□□□□□ -1.82
CBWD3-217ENST00000621474 LUZP6Q538Z0 58 aa3.59□□□□□ -1.83
CBWD3-217ENST00000621474 LCE1EQ5T753 118 aa3.57□□□□□ -1.84
CBWD3-217ENST00000621474 MUC5ACP98088 5654 aa3.55□□□□□ -1.84
CBWD3-217ENST00000621474 MUC5BQ9HC84 5762 aaPredicted RBP3.47□□□□□ -1.85
CBWD3-217ENST00000621474 LCE3DQ9BYE3 92 aa3.43□□□□□ -1.86
CBWD3-217ENST00000621474 AHNAKQ09666 5890 aaKnown RBP3.35□□□□□ -1.87
CBWD3-217ENST00000621474 LCE1CQ5T751 118 aa3.33□□□□□ -1.88
CBWD3-217ENST00000621474 LCE1BQ5T7P3 118 aa3.33□□□□□ -1.88
CBWD3-217ENST00000621474 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.32□□□□□ -1.88
CBWD3-217ENST00000621474 LCE3EQ5T5B0 92 aa3.26□□□□□ -1.89
CBWD3-217ENST00000621474 NDUFAF8A1L188 74 aa3.18□□□□□ -1.9
CBWD3-217ENST00000621474 KRTAP5-11Q6L8G4 156 aa3.02□□□□□ -1.93
CBWD3-217ENST00000621474 KRTAP21-2Q3LI59 83 aa2.87□□□□□ -1.95
CBWD3-217ENST00000621474 LCE1FQ5T754 118 aa2.82□□□□□ -1.96
CBWD3-217ENST00000621474 KRTAP4-4Q9BYR3 166 aa2.73□□□□□ -1.97
CBWD3-217ENST00000621474 PRM1P04553 51 aa2.61□□□□□ -1.99
CBWD3-217ENST00000621474 PHGR1C9JFL3 82 aa2.58□□□□□ -2
CBWD3-217ENST00000621474 INE1O15225 51 aa2.55□□□□□ -2
CBWD3-217ENST00000621474 MUC19Q7Z5P9 8384 aa2.41□□□□□ -2.02
CBWD3-217ENST00000621474 KRTAP21-1Q3LI58 79 aa1.78□□□□□ -2.12
CBWD3-217ENST00000621474 MUC16Q8WXI7 14507 aa1.66□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 50.5 ms