RNA–Protein interactions for RNA: ENST00000621453.4

FMR1-219, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best) BASIC

Gene FMR1, Length 1,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-219ENST00000621453 KRTAP19-3Q7Z4W3 81 aa9.57□□□□□ -0.88
FMR1-219ENST00000621453 MT1GP13640 62 aa9.49□□□□□ -0.89
FMR1-219ENST00000621453 SYNE2Q8WXH0 6885 aaKnown RBP9.46□□□□□ -0.9
FMR1-219ENST00000621453 MT1MQ8N339 61 aa9.41□□□□□ -0.9
FMR1-219ENST00000621453 KRTAP5-9P26371 169 aa9.4□□□□□ -0.9
FMR1-219ENST00000621453 KRTAP9-6A8MVA2 160 aa9.4□□□□□ -0.91
FMR1-219ENST00000621453 LCE5AQ5TCM9 118 aa9.36□□□□□ -0.91
FMR1-219ENST00000621453 KRTAP9-6A0A140TA67 174 aa9.34□□□□□ -0.91
FMR1-219ENST00000621453 KRTAP4-3Q9BYR4 195 aa9.28□□□□□ -0.92
FMR1-219ENST00000621453 H3BS24 57 aa9.24□□□□□ -0.93
FMR1-219ENST00000621453 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.23□□□□□ -0.93
FMR1-219ENST00000621453 LCE1AQ5T7P2 110 aa9.15□□□□□ -0.94
FMR1-219ENST00000621453 MDN1Q9NU22 5596 aa9.14□□□□□ -0.95
FMR1-219ENST00000621453 KRTAP6-3Q3LI67 103 aa9.09□□□□□ -0.95
FMR1-219ENST00000621453 SPRR2EP22531 72 aa9.05□□□□□ -0.96
FMR1-219ENST00000621453 SPRR2BP35325 72 aa9.05□□□□□ -0.96
FMR1-219ENST00000621453 SPRR2AP35326 72 aa9.05□□□□□ -0.96
FMR1-219ENST00000621453 LOC100996750A0A140TA64 210 aa9.03□□□□□ -0.96
FMR1-219ENST00000621453 DSTQ03001 7570 aaKnown RBP8.96□□□□□ -0.98
FMR1-219ENST00000621453 A0A0A0MQY5 61 aa8.83□□□□□ -1
FMR1-219ENST00000621453 KRTAP2-3P0C7H8 128 aa8.78□□□□□ -1
FMR1-219ENST00000621453 KRTAP2-4Q9BYR9 128 aa8.78□□□□□ -1
FMR1-219ENST00000621453 KRTAP2-1Q9BYU5 128 aa8.78□□□□□ -1
FMR1-219ENST00000621453 SPRR2DP22532 72 aa8.71□□□□□ -1.01
FMR1-219ENST00000621453 KRTAP9-7A8MTY7 169 aa8.62□□□□□ -1.03
FMR1-219ENST00000621453 KRTAP5-5Q701N2 237 aaPredicted RBP8.45□□□□□ -1.06
FMR1-219ENST00000621453 NEBP20929 6669 aa8.42□□□□□ -1.06
FMR1-219ENST00000621453 MT1AP04731 61 aa8.36□□□□□ -1.07
FMR1-219ENST00000621453 LCE3BQ5TA77 95 aa8.34□□□□□ -1.07
FMR1-219ENST00000621453 KRTAP6-1Q3LI64 71 aa8.32□□□□□ -1.08
FMR1-219ENST00000621453 INE1O15225 51 aa8.21□□□□□ -1.1
FMR1-219ENST00000621453 SYNE1Q8NF91 8797 aaKnown RBP8.1□□□□□ -1.11
FMR1-219ENST00000621453 KRTAP5-4Q6L8H1 288 aa7.92□□□□□ -1.14
FMR1-219ENST00000621453 KRTAP9-4Q9BYQ2 154 aa7.92□□□□□ -1.14
FMR1-219ENST00000621453 KRTAP12-4P60329 112 aa7.77□□□□□ -1.17
FMR1-219ENST00000621453 KRTAP4-9Q9BYQ8 210 aa7.75□□□□□ -1.17
FMR1-219ENST00000621453 KRTAP2-2Q9BYT5 123 aa7.75□□□□□ -1.17
FMR1-219ENST00000621453 LCE4AQ5TA78 99 aa7.7□□□□□ -1.18
FMR1-219ENST00000621453 KRTAP20-1Q3LI63 56 aa7.66□□□□□ -1.18
FMR1-219ENST00000621453 KRTAP6-2Q3LI66 62 aa7.6□□□□□ -1.19
FMR1-219ENST00000621453 MT4P47944 62 aa7.58□□□□□ -1.2
FMR1-219ENST00000621453 MT3P25713 68 aa7.56□□□□□ -1.2
FMR1-219ENST00000621453 KRTAP4-6Q9BYQ5 205 aa7.55□□□□□ -1.2
FMR1-219ENST00000621453 LCE3DQ9BYE3 92 aa7.48□□□□□ -1.21
FMR1-219ENST00000621453 KRTAP20-2Q3LI61 65 aa7.41□□□□□ -1.22
FMR1-219ENST00000621453 LCE1DQ5T752 114 aa7.38□□□□□ -1.23
FMR1-219ENST00000621453 LCE3EQ5T5B0 92 aa7.3□□□□□ -1.24
FMR1-219ENST00000621453 HMCN1Q96RW7 5635 aa7.3□□□□□ -1.24
FMR1-219ENST00000621453 KRTAP5-2Q701N4 177 aa7.24□□□□□ -1.25
FMR1-219ENST00000621453 KRTAP5-3Q6L8H2 238 aa7.12□□□□□ -1.27
FMR1-219ENST00000621453 OBSCNQ5VST9 7968 aa7.03□□□□□ -1.28
FMR1-219ENST00000621453 PRM1P04553 51 aa6.52□□□□□ -1.37
FMR1-219ENST00000621453 LCE1EQ5T753 118 aa6.47□□□□□ -1.37
FMR1-219ENST00000621453 KRTAP4-11Q9BYQ6 195 aa6.35□□□□□ -1.39
FMR1-219ENST00000621453 AHNAK2Q8IVF2 5795 aa6.32□□□□□ -1.4
FMR1-219ENST00000621453 KRTAP5-1Q6L8H4 278 aa6.23□□□□□ -1.41
FMR1-219ENST00000621453 MUC5ACP98088 5654 aa6.15□□□□□ -1.42
FMR1-219ENST00000621453 LCE1BQ5T7P3 118 aa6.13□□□□□ -1.43
FMR1-219ENST00000621453 KRTAP5-10Q6L8G5 202 aa6.13□□□□□ -1.43
FMR1-219ENST00000621453 KRTAP5-8O75690 187 aa6.11□□□□□ -1.43
FMR1-219ENST00000621453 KRTAP4-2Q9BYR5 136 aa6.06□□□□□ -1.44
FMR1-219ENST00000621453 LCE1CQ5T751 118 aa6.05□□□□□ -1.44
FMR1-219ENST00000621453 KRTAP5-7Q6L8G8 165 aa5.94□□□□□ -1.46
FMR1-219ENST00000621453 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.68□□□□□ -1.5
FMR1-219ENST00000621453 GPR98Q8WXG9 6306 aa5.45□□□□□ -1.54
FMR1-219ENST00000621453 KRTAP21-2Q3LI59 83 aa5.43□□□□□ -1.54
FMR1-219ENST00000621453 KRTAP9-9Q9BYP9 154 aa5.43□□□□□ -1.54
FMR1-219ENST00000621453 KRTAP5-11Q6L8G4 156 aa5.32□□□□□ -1.56
FMR1-219ENST00000621453 MUC5BQ9HC84 5762 aaPredicted RBP5.23□□□□□ -1.57
FMR1-219ENST00000621453 KRTAP4-12Q9BQ66 201 aa4.98□□□□□ -1.61
FMR1-219ENST00000621453 KRTAP4-4Q9BYR3 166 aa4.84□□□□□ -1.63
FMR1-219ENST00000621453 LCE1FQ5T754 118 aa4.69□□□□□ -1.66
FMR1-219ENST00000621453 AHNAKQ09666 5890 aaKnown RBP4.58□□□□□ -1.68
FMR1-219ENST00000621453 PHGR1C9JFL3 82 aa4.56□□□□□ -1.68
FMR1-219ENST00000621453 MUC19Q7Z5P9 8384 aa4.17□□□□□ -1.74
FMR1-219ENST00000621453 KRTAP21-1Q3LI58 79 aa4.02□□□□□ -1.77
FMR1-219ENST00000621453 MUC16Q8WXI7 14507 aa3□□□□□ -1.93
Retrieved 77 of 20,778 RNA–protein pairs in 12.7 ms