RNA–Protein interactions for RNA: ENST00000621093.4

POLR2J3-221, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene POLR2J3, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-221ENST00000621093 KRTAP20-1Q3LI63 56 aa3.92□□□□□ -1.78
POLR2J3-221ENST00000621093 KRTAP23-1A1A580 65 aa3.91□□□□□ -1.78
POLR2J3-221ENST00000621093 LCE5AQ5TCM9 118 aa3.91□□□□□ -1.78
POLR2J3-221ENST00000621093 MT1LQ93083 61 aa3.91□□□□□ -1.78
POLR2J3-221ENST00000621093 PMAIP1Q13794 54 aa3.9□□□□□ -1.79
POLR2J3-221ENST00000621093 MT1GP13640 62 aa3.86□□□□□ -1.79
POLR2J3-221ENST00000621093 KRTAP2-3P0C7H8 128 aa3.84□□□□□ -1.79
POLR2J3-221ENST00000621093 KRTAP2-4Q9BYR9 128 aa3.84□□□□□ -1.79
POLR2J3-221ENST00000621093 MT1MQ8N339 61 aa3.83□□□□□ -1.8
POLR2J3-221ENST00000621093 PP632Q6XCG6 107 aa3.82□□□□□ -1.8
POLR2J3-221ENST00000621093 LCE3BQ5TA77 95 aa3.8□□□□□ -1.8
POLR2J3-221ENST00000621093 KRTAP4-7Q9BYR0 210 aa3.79□□□□□ -1.8
POLR2J3-221ENST00000621093 KRTAP4-3Q9BYR4 195 aa3.79□□□□□ -1.8
POLR2J3-221ENST00000621093 KRTAP15-1Q3LI76 137 aa3.77□□□□□ -1.81
POLR2J3-221ENST00000621093 KRTAP2-2Q9BYT5 123 aa3.74□□□□□ -1.81
POLR2J3-221ENST00000621093 KRTAP2-1Q9BYU5 128 aa3.74□□□□□ -1.81
POLR2J3-221ENST00000621093 KTN1-AS1Q86SY8 53 aa3.71□□□□□ -1.82
POLR2J3-221ENST00000621093 PRAC1Q96KF2 57 aa3.69□□□□□ -1.82
POLR2J3-221ENST00000621093 LCE3CQ5T5A8 94 aa3.66□□□□□ -1.82
POLR2J3-221ENST00000621093 KRTAP19-4Q3LI73 84 aa3.64□□□□□ -1.83
POLR2J3-221ENST00000621093 DSTQ03001 7570 aaKnown RBP3.63□□□□□ -1.83
POLR2J3-221ENST00000621093 SVIPQ8NHG7 77 aa3.62□□□□□ -1.83
POLR2J3-221ENST00000621093 LOC100996750A0A140TA64 210 aa3.57□□□□□ -1.84
POLR2J3-221ENST00000621093 GPR98Q8WXG9 6306 aa3.54□□□□□ -1.84
POLR2J3-221ENST00000621093 KRTAP4-9Q9BYQ8 210 aa3.5□□□□□ -1.85
POLR2J3-221ENST00000621093 KRTAP9-6A8MVA2 160 aa3.49□□□□□ -1.85
POLR2J3-221ENST00000621093 KRTAP5-5Q701N2 237 aaPredicted RBP3.48□□□□□ -1.85
POLR2J3-221ENST00000621093 KRTAP5-4Q6L8H1 288 aa3.47□□□□□ -1.85
POLR2J3-221ENST00000621093 LCE4AQ5TA78 99 aa3.46□□□□□ -1.86
POLR2J3-221ENST00000621093 MT4P47944 62 aa3.44□□□□□ -1.86
POLR2J3-221ENST00000621093 LCE1DQ5T752 114 aa3.43□□□□□ -1.86
POLR2J3-221ENST00000621093 KRTAP4-6Q9BYQ5 205 aa3.38□□□□□ -1.87
POLR2J3-221ENST00000621093 MT1AP04731 61 aa3.32□□□□□ -1.88
POLR2J3-221ENST00000621093 KRTAP6-1Q3LI64 71 aa3.32□□□□□ -1.88
POLR2J3-221ENST00000621093 SPRR5A0A1B0GTR4 108 aa3.3□□□□□ -1.88
POLR2J3-221ENST00000621093 KRTAP12-4P60329 112 aa3.28□□□□□ -1.88
POLR2J3-221ENST00000621093 KRTAP20-2Q3LI61 65 aa3.27□□□□□ -1.89
POLR2J3-221ENST00000621093 SYNE1Q8NF91 8797 aaKnown RBP3.25□□□□□ -1.89
POLR2J3-221ENST00000621093 HMCN1Q96RW7 5635 aa3.23□□□□□ -1.89
POLR2J3-221ENST00000621093 KRTAP9-4Q9BYQ2 154 aa3.19□□□□□ -1.9
POLR2J3-221ENST00000621093 KRTAP5-3Q6L8H2 238 aa3.17□□□□□ -1.9
POLR2J3-221ENST00000621093 KRTAP5-10Q6L8G5 202 aa3.16□□□□□ -1.9
POLR2J3-221ENST00000621093 AHNAK2Q8IVF2 5795 aa3.12□□□□□ -1.91
POLR2J3-221ENST00000621093 KRTAP6-2Q3LI66 62 aa3.1□□□□□ -1.91
POLR2J3-221ENST00000621093 KRTAP5-2Q701N4 177 aa3.09□□□□□ -1.91
POLR2J3-221ENST00000621093 KRTAP5-7Q6L8G8 165 aa3.08□□□□□ -1.92
POLR2J3-221ENST00000621093 LUZP6Q538Z0 58 aa3.07□□□□□ -1.92
POLR2J3-221ENST00000621093 MT3P25713 68 aa3□□□□□ -1.93
POLR2J3-221ENST00000621093 KRTAP4-11Q9BYQ6 195 aa2.9□□□□□ -1.95
POLR2J3-221ENST00000621093 NDUFAF8A1L188 74 aa2.85□□□□□ -1.95
POLR2J3-221ENST00000621093 KRTAP5-8O75690 187 aa2.81□□□□□ -1.96
POLR2J3-221ENST00000621093 OBSCNQ5VST9 7968 aa2.77□□□□□ -1.97
POLR2J3-221ENST00000621093 KRTAP5-1Q6L8H4 278 aa2.73□□□□□ -1.97
POLR2J3-221ENST00000621093 AHNAKQ09666 5890 aaKnown RBP2.73□□□□□ -1.97
POLR2J3-221ENST00000621093 MUC5ACP98088 5654 aa2.71□□□□□ -1.98
POLR2J3-221ENST00000621093 LCE3DQ9BYE3 92 aa2.68□□□□□ -1.98
POLR2J3-221ENST00000621093 LCE1EQ5T753 118 aa2.67□□□□□ -1.98
POLR2J3-221ENST00000621093 A0A0A0MQY5 61 aa2.63□□□□□ -1.99
POLR2J3-221ENST00000621093 MUC5BQ9HC84 5762 aaPredicted RBP2.62□□□□□ -1.99
POLR2J3-221ENST00000621093 KRTAP9-9Q9BYP9 154 aa2.58□□□□□ -2
POLR2J3-221ENST00000621093 LCE3EQ5T5B0 92 aa2.57□□□□□ -2
POLR2J3-221ENST00000621093 LCE1BQ5T7P3 118 aa2.55□□□□□ -2
POLR2J3-221ENST00000621093 KRTAP4-2Q9BYR5 136 aa2.55□□□□□ -2
POLR2J3-221ENST00000621093 LCE1CQ5T751 118 aa2.49□□□□□ -2.01
POLR2J3-221ENST00000621093 H3BS24 57 aa2.47□□□□□ -2.01
POLR2J3-221ENST00000621093 INE1O15225 51 aa2.47□□□□□ -2.01
POLR2J3-221ENST00000621093 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.3□□□□□ -2.04
POLR2J3-221ENST00000621093 KRTAP4-12Q9BQ66 201 aa2.24□□□□□ -2.05
POLR2J3-221ENST00000621093 KRTAP5-11Q6L8G4 156 aa2.23□□□□□ -2.05
POLR2J3-221ENST00000621093 KRTAP21-2Q3LI59 83 aa2.17□□□□□ -2.06
POLR2J3-221ENST00000621093 PRM1P04553 51 aa2.12□□□□□ -2.07
POLR2J3-221ENST00000621093 LCE1FQ5T754 118 aa2.08□□□□□ -2.08
POLR2J3-221ENST00000621093 KRTAP4-4Q9BYR3 166 aa1.99□□□□□ -2.09
POLR2J3-221ENST00000621093 PHGR1C9JFL3 82 aa1.92□□□□□ -2.1
POLR2J3-221ENST00000621093 MUC19Q7Z5P9 8384 aa1.68□□□□□ -2.14
POLR2J3-221ENST00000621093 KRTAP21-1Q3LI58 79 aa1.37□□□□□ -2.19
POLR2J3-221ENST00000621093 MUC16Q8WXI7 14507 aa1.24□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 140.7 ms