RNA–Protein interactions for RNA: ENST00000620529.1

PCGF3-213, Transcript of polycomb group ring finger 3, humanhuman

BASIC

Gene PCGF3, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-213ENST00000620529 SYNE2Q8WXH0 6885 aaKnown RBP5.9□□□□□ -1.46
PCGF3-213ENST00000620529 MT1LQ93083 61 aa5.89□□□□□ -1.47
PCGF3-213ENST00000620529 KRTAP19-4Q3LI73 84 aa5.88□□□□□ -1.47
PCGF3-213ENST00000620529 KRTAP5-9P26371 169 aa5.86□□□□□ -1.47
PCGF3-213ENST00000620529 MUC12Q9UKN1 5478 aa5.82□□□□□ -1.48
PCGF3-213ENST00000620529 LCE3CQ5T5A8 94 aa5.81□□□□□ -1.48
PCGF3-213ENST00000620529 KRTAP19-3Q7Z4W3 81 aa5.81□□□□□ -1.48
PCGF3-213ENST00000620529 KRTAP6-3Q3LI67 103 aa5.79□□□□□ -1.48
PCGF3-213ENST00000620529 KRTAP4-12Q9BQ66 201 aa5.77□□□□□ -1.49
PCGF3-213ENST00000620529 SPRR5A0A1B0GTR4 108 aa5.76□□□□□ -1.49
PCGF3-213ENST00000620529 LCE4AQ5TA78 99 aa5.76□□□□□ -1.49
PCGF3-213ENST00000620529 MT1GP13640 62 aa5.75□□□□□ -1.49
PCGF3-213ENST00000620529 KRTAP9-7A8MTY7 169 aa5.68□□□□□ -1.5
PCGF3-213ENST00000620529 LCE5AQ5TCM9 118 aa5.68□□□□□ -1.5
PCGF3-213ENST00000620529 KRTAP4-7Q9BYR0 210 aa5.68□□□□□ -1.5
PCGF3-213ENST00000620529 SPRR2EP22531 72 aa5.67□□□□□ -1.5
PCGF3-213ENST00000620529 SPRR2BP35325 72 aa5.67□□□□□ -1.5
PCGF3-213ENST00000620529 SPRR2AP35326 72 aa5.67□□□□□ -1.5
PCGF3-213ENST00000620529 MT1MQ8N339 61 aa5.67□□□□□ -1.5
PCGF3-213ENST00000620529 LCE1AQ5T7P2 110 aa5.66□□□□□ -1.5
PCGF3-213ENST00000620529 MDN1Q9NU22 5596 aa5.61□□□□□ -1.51
PCGF3-213ENST00000620529 LCE3BQ5TA77 95 aa5.59□□□□□ -1.51
PCGF3-213ENST00000620529 KRTAP4-3Q9BYR4 195 aa5.54□□□□□ -1.52
PCGF3-213ENST00000620529 KRTAP9-9Q9BYP9 154 aa5.47□□□□□ -1.53
PCGF3-213ENST00000620529 KRTAP9-4Q9BYQ2 154 aa5.47□□□□□ -1.53
PCGF3-213ENST00000620529 SPRR2DP22532 72 aa5.46□□□□□ -1.54
PCGF3-213ENST00000620529 KRTAP9-6A8MVA2 160 aa5.45□□□□□ -1.54
PCGF3-213ENST00000620529 INE1O15225 51 aa5.4□□□□□ -1.55
PCGF3-213ENST00000620529 DSTQ03001 7570 aaKnown RBP5.38□□□□□ -1.55
PCGF3-213ENST00000620529 NEBP20929 6669 aa5.35□□□□□ -1.55
PCGF3-213ENST00000620529 LCE1DQ5T752 114 aa5.25□□□□□ -1.57
PCGF3-213ENST00000620529 KRTAP4-9Q9BYQ8 210 aa5.11□□□□□ -1.59
PCGF3-213ENST00000620529 KRTAP5-5Q701N2 237 aaPredicted RBP5.09□□□□□ -1.6
PCGF3-213ENST00000620529 KRTAP2-3P0C7H8 128 aa5.07□□□□□ -1.6
PCGF3-213ENST00000620529 KRTAP2-4Q9BYR9 128 aa5.07□□□□□ -1.6
PCGF3-213ENST00000620529 KRTAP2-1Q9BYU5 128 aa5.03□□□□□ -1.6
PCGF3-213ENST00000620529 MT1AP04731 61 aa5.02□□□□□ -1.61
PCGF3-213ENST00000620529 KRTAP20-1Q3LI63 56 aa5□□□□□ -1.61
PCGF3-213ENST00000620529 KRTAP4-2Q9BYR5 136 aa5□□□□□ -1.61
PCGF3-213ENST00000620529 KRTAP2-2Q9BYT5 123 aa4.97□□□□□ -1.61
PCGF3-213ENST00000620529 KRTAP6-1Q3LI64 71 aa4.96□□□□□ -1.62
PCGF3-213ENST00000620529 KRTAP4-11Q9BYQ6 195 aa4.9□□□□□ -1.63
PCGF3-213ENST00000620529 KRTAP5-4Q6L8H1 288 aa4.88□□□□□ -1.63
PCGF3-213ENST00000620529 SYNE1Q8NF91 8797 aaKnown RBP4.8□□□□□ -1.64
PCGF3-213ENST00000620529 KRTAP12-4P60329 112 aa4.79□□□□□ -1.64
PCGF3-213ENST00000620529 MT4P47944 62 aa4.73□□□□□ -1.65
PCGF3-213ENST00000620529 KRTAP5-3Q6L8H2 238 aa4.59□□□□□ -1.67
PCGF3-213ENST00000620529 KRTAP20-2Q3LI61 65 aa4.58□□□□□ -1.68
PCGF3-213ENST00000620529 KRTAP6-2Q3LI66 62 aa4.58□□□□□ -1.68
PCGF3-213ENST00000620529 MT3P25713 68 aa4.56□□□□□ -1.68
PCGF3-213ENST00000620529 HMCN1Q96RW7 5635 aa4.53□□□□□ -1.68
PCGF3-213ENST00000620529 KRTAP5-2Q701N4 177 aa4.42□□□□□ -1.7
PCGF3-213ENST00000620529 LCE3DQ9BYE3 92 aa4.37□□□□□ -1.71
PCGF3-213ENST00000620529 LCE3EQ5T5B0 92 aa4.25□□□□□ -1.73
PCGF3-213ENST00000620529 OBSCNQ5VST9 7968 aa4.18□□□□□ -1.74
PCGF3-213ENST00000620529 AHNAK2Q8IVF2 5795 aa4.04□□□□□ -1.76
PCGF3-213ENST00000620529 LCE1FQ5T754 118 aa4.03□□□□□ -1.77
PCGF3-213ENST00000620529 LCE1EQ5T753 118 aa3.95□□□□□ -1.78
PCGF3-213ENST00000620529 KRTAP5-10Q6L8G5 202 aa3.84□□□□□ -1.79
PCGF3-213ENST00000620529 KRTAP5-1Q6L8H4 278 aa3.82□□□□□ -1.8
PCGF3-213ENST00000620529 KRTAP5-8O75690 187 aa3.81□□□□□ -1.8
PCGF3-213ENST00000620529 LCE1BQ5T7P3 118 aa3.74□□□□□ -1.81
PCGF3-213ENST00000620529 PRM1P04553 51 aa3.69□□□□□ -1.82
PCGF3-213ENST00000620529 LCE1CQ5T751 118 aa3.69□□□□□ -1.82
PCGF3-213ENST00000620529 KRTAP5-7Q6L8G8 165 aa3.69□□□□□ -1.82
PCGF3-213ENST00000620529 MUC5ACP98088 5654 aa3.64□□□□□ -1.83
PCGF3-213ENST00000620529 GPR98Q8WXG9 6306 aa3.62□□□□□ -1.83
PCGF3-213ENST00000620529 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.44□□□□□ -1.86
PCGF3-213ENST00000620529 KRTAP5-11Q6L8G4 156 aa3.35□□□□□ -1.87
PCGF3-213ENST00000620529 MUC5BQ9HC84 5762 aaPredicted RBP3.25□□□□□ -1.89
PCGF3-213ENST00000620529 KRTAP21-2Q3LI59 83 aa3.23□□□□□ -1.89
PCGF3-213ENST00000620529 AHNAKQ09666 5890 aaKnown RBP3.03□□□□□ -1.92
PCGF3-213ENST00000620529 KRTAP4-4Q9BYR3 166 aa2.9□□□□□ -1.95
PCGF3-213ENST00000620529 PHGR1C9JFL3 82 aa2.79□□□□□ -1.96
PCGF3-213ENST00000620529 MUC19Q7Z5P9 8384 aa2.47□□□□□ -2.01
PCGF3-213ENST00000620529 KRTAP21-1Q3LI58 79 aa2.39□□□□□ -2.03
PCGF3-213ENST00000620529 MUC16Q8WXI7 14507 aa1.83□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 56.5 ms