RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 KRTAP9-6A0A140TA67 174 aa4.49□□□□□ -1.69
TNFAIP3-209ENST00000619035 LCE3CQ5T5A8 94 aa4.49□□□□□ -1.69
TNFAIP3-209ENST00000619035 SPRR2FQ96RM1 72 aa4.48□□□□□ -1.69
TNFAIP3-209ENST00000619035 KRTAP4-7Q9BYR0 210 aa4.47□□□□□ -1.69
TNFAIP3-209ENST00000619035 LOC100996750A0A140TA64 210 aa4.44□□□□□ -1.7
TNFAIP3-209ENST00000619035 KRTAP4-6Q9BYQ5 205 aa4.44□□□□□ -1.7
TNFAIP3-209ENST00000619035 KRTAP5-9P26371 169 aa4.43□□□□□ -1.7
TNFAIP3-209ENST00000619035 KRTAP19-3Q7Z4W3 81 aa4.39□□□□□ -1.71
TNFAIP3-209ENST00000619035 MT1GP13640 62 aa4.38□□□□□ -1.71
TNFAIP3-209ENST00000619035 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.37□□□□□ -1.71
TNFAIP3-209ENST00000619035 KRTAP9-6A8MVA2 160 aa4.36□□□□□ -1.71
TNFAIP3-209ENST00000619035 MDN1Q9NU22 5596 aa4.33□□□□□ -1.72
TNFAIP3-209ENST00000619035 KRTAP6-3Q3LI67 103 aa4.33□□□□□ -1.72
TNFAIP3-209ENST00000619035 LCE5AQ5TCM9 118 aa4.32□□□□□ -1.72
TNFAIP3-209ENST00000619035 MT1MQ8N339 61 aa4.3□□□□□ -1.72
TNFAIP3-209ENST00000619035 KRTAP4-3Q9BYR4 195 aa4.29□□□□□ -1.72
TNFAIP3-209ENST00000619035 LCE1AQ5T7P2 110 aa4.25□□□□□ -1.73
TNFAIP3-209ENST00000619035 SPRR2EP22531 72 aa4.22□□□□□ -1.73
TNFAIP3-209ENST00000619035 SPRR2BP35325 72 aa4.22□□□□□ -1.73
TNFAIP3-209ENST00000619035 SPRR2AP35326 72 aa4.22□□□□□ -1.73
TNFAIP3-209ENST00000619035 DSTQ03001 7570 aaKnown RBP4.2□□□□□ -1.74
TNFAIP3-209ENST00000619035 KRTAP9-7A8MTY7 169 aa4.11□□□□□ -1.75
TNFAIP3-209ENST00000619035 SPRR2DP22532 72 aa4.06□□□□□ -1.76
TNFAIP3-209ENST00000619035 KRTAP2-3P0C7H8 128 aa4.02□□□□□ -1.77
TNFAIP3-209ENST00000619035 KRTAP2-4Q9BYR9 128 aa4.02□□□□□ -1.77
TNFAIP3-209ENST00000619035 KRTAP2-1Q9BYU5 128 aa4.02□□□□□ -1.77
TNFAIP3-209ENST00000619035 NEBP20929 6669 aa3.98□□□□□ -1.77
TNFAIP3-209ENST00000619035 LCE3BQ5TA77 95 aa3.89□□□□□ -1.79
TNFAIP3-209ENST00000619035 KRTAP5-5Q701N2 237 aaPredicted RBP3.88□□□□□ -1.79
TNFAIP3-209ENST00000619035 INE1O15225 51 aa3.86□□□□□ -1.79
TNFAIP3-209ENST00000619035 KRTAP4-12Q9BQ66 201 aa3.83□□□□□ -1.8
TNFAIP3-209ENST00000619035 MT1AP04731 61 aa3.82□□□□□ -1.8
TNFAIP3-209ENST00000619035 KRTAP6-1Q3LI64 71 aa3.81□□□□□ -1.8
TNFAIP3-209ENST00000619035 KRTAP9-9Q9BYP9 154 aa3.79□□□□□ -1.8
TNFAIP3-209ENST00000619035 KRTAP9-4Q9BYQ2 154 aa3.79□□□□□ -1.8
TNFAIP3-209ENST00000619035 SYNE1Q8NF91 8797 aaKnown RBP3.73□□□□□ -1.81
TNFAIP3-209ENST00000619035 KRTAP5-4Q6L8H1 288 aa3.71□□□□□ -1.82
TNFAIP3-209ENST00000619035 KRTAP2-2Q9BYT5 123 aa3.7□□□□□ -1.82
TNFAIP3-209ENST00000619035 KRTAP20-1Q3LI63 56 aa3.67□□□□□ -1.82
TNFAIP3-209ENST00000619035 KRTAP4-9Q9BYQ8 210 aa3.67□□□□□ -1.82
TNFAIP3-209ENST00000619035 LCE4AQ5TA78 99 aa3.65□□□□□ -1.83
TNFAIP3-209ENST00000619035 KRTAP12-4P60329 112 aa3.62□□□□□ -1.83
TNFAIP3-209ENST00000619035 LCE1DQ5T752 114 aa3.59□□□□□ -1.83
TNFAIP3-209ENST00000619035 MT4P47944 62 aa3.56□□□□□ -1.84
TNFAIP3-209ENST00000619035 KRTAP6-2Q3LI66 62 aa3.5□□□□□ -1.85
TNFAIP3-209ENST00000619035 MT3P25713 68 aa3.47□□□□□ -1.85
TNFAIP3-209ENST00000619035 KRTAP4-2Q9BYR5 136 aa3.46□□□□□ -1.85
TNFAIP3-209ENST00000619035 HMCN1Q96RW7 5635 aa3.44□□□□□ -1.86
TNFAIP3-209ENST00000619035 KRTAP20-2Q3LI61 65 aa3.44□□□□□ -1.86
TNFAIP3-209ENST00000619035 LCE3DQ9BYE3 92 aa3.41□□□□□ -1.86
TNFAIP3-209ENST00000619035 OBSCNQ5VST9 7968 aa3.38□□□□□ -1.87
TNFAIP3-209ENST00000619035 KRTAP5-2Q701N4 177 aa3.37□□□□□ -1.87
TNFAIP3-209ENST00000619035 KRTAP4-11Q9BYQ6 195 aa3.37□□□□□ -1.87
TNFAIP3-209ENST00000619035 LCE3EQ5T5B0 92 aa3.33□□□□□ -1.88
TNFAIP3-209ENST00000619035 KRTAP5-3Q6L8H2 238 aa3.32□□□□□ -1.88
TNFAIP3-209ENST00000619035 GPR98Q8WXG9 6306 aa3.16□□□□□ -1.9
TNFAIP3-209ENST00000619035 PRM1P04553 51 aa3.1□□□□□ -1.91
TNFAIP3-209ENST00000619035 LCE1EQ5T753 118 aa3.04□□□□□ -1.92
TNFAIP3-209ENST00000619035 AHNAK2Q8IVF2 5795 aa2.98□□□□□ -1.93
TNFAIP3-209ENST00000619035 KRTAP5-1Q6L8H4 278 aa2.89□□□□□ -1.95
TNFAIP3-209ENST00000619035 LCE1FQ5T754 118 aa2.86□□□□□ -1.95
TNFAIP3-209ENST00000619035 LCE1BQ5T7P3 118 aa2.86□□□□□ -1.95
TNFAIP3-209ENST00000619035 KRTAP5-8O75690 187 aa2.86□□□□□ -1.95
TNFAIP3-209ENST00000619035 KRTAP5-10Q6L8G5 202 aa2.85□□□□□ -1.95
TNFAIP3-209ENST00000619035 MUC5ACP98088 5654 aa2.84□□□□□ -1.95
TNFAIP3-209ENST00000619035 KRTAP5-7Q6L8G8 165 aa2.82□□□□□ -1.96
TNFAIP3-209ENST00000619035 LCE1CQ5T751 118 aa2.82□□□□□ -1.96
TNFAIP3-209ENST00000619035 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.66□□□□□ -1.98
TNFAIP3-209ENST00000619035 MUC5BQ9HC84 5762 aaPredicted RBP2.52□□□□□ -2.01
TNFAIP3-209ENST00000619035 KRTAP5-11Q6L8G4 156 aa2.48□□□□□ -2.01
TNFAIP3-209ENST00000619035 AHNAKQ09666 5890 aaKnown RBP2.48□□□□□ -2.01
TNFAIP3-209ENST00000619035 KRTAP21-2Q3LI59 83 aa2.47□□□□□ -2.01
TNFAIP3-209ENST00000619035 KRTAP4-4Q9BYR3 166 aa2.28□□□□□ -2.04
TNFAIP3-209ENST00000619035 PHGR1C9JFL3 82 aa2.12□□□□□ -2.07
TNFAIP3-209ENST00000619035 MUC19Q7Z5P9 8384 aa2.04□□□□□ -2.08
TNFAIP3-209ENST00000619035 KRTAP21-1Q3LI58 79 aa1.87□□□□□ -2.11
TNFAIP3-209ENST00000619035 MUC16Q8WXI7 14507 aa1.37□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 208.3 ms