RNA–Protein interactions for RNA: ENST00000618450.1

CHD7-212, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

Gene CHD7, Length 4,222 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-212ENST00000618450 USH2AO75445 5202 aa3.02□□□□□ -1.93
CHD7-212ENST00000618450 KRTAP12-3P60328 96 aa3.01□□□□□ -1.93
CHD7-212ENST00000618450 KRTAP10-10P60014 251 aa3.01□□□□□ -1.93
CHD7-212ENST00000618450 KRTAP5-3Q6L8H2 238 aa2.98□□□□□ -1.93
CHD7-212ENST00000618450 PRO2289Q9P1D8 64 aa2.98□□□□□ -1.93
CHD7-212ENST00000618450 KRTAP9-6A8MVA2 160 aa2.95□□□□□ -1.94
CHD7-212ENST00000618450 INE1O15225 51 aa2.94□□□□□ -1.94
CHD7-212ENST00000618450 KRTAP19-5Q3LI72 72 aa2.91□□□□□ -1.94
CHD7-212ENST00000618450 LCE3CQ5T5A8 94 aa2.91□□□□□ -1.94
CHD7-212ENST00000618450 M0R2T5 61 aa2.9□□□□□ -1.95
CHD7-212ENST00000618450 KRTAP2-3P0C7H8 128 aa2.87□□□□□ -1.95
CHD7-212ENST00000618450 KRTAP2-4Q9BYR9 128 aa2.87□□□□□ -1.95
CHD7-212ENST00000618450 KRTAP2-1Q9BYU5 128 aa2.87□□□□□ -1.95
CHD7-212ENST00000618450 KRTAP19-7Q3SYF9 63 aa2.87□□□□□ -1.95
CHD7-212ENST00000618450 SSPOA2VEC9 5147 aa2.86□□□□□ -1.95
CHD7-212ENST00000618450 MT1LQ93083 61 aa2.73□□□□□ -1.97
CHD7-212ENST00000618450 MT1EP04732 61 aa2.72□□□□□ -1.97
CHD7-212ENST00000618450 FCGBPQ9Y6R7 5405 aaPredicted RBP2.65□□□□□ -1.99
CHD7-212ENST00000618450 KRTAP19-6Q3LI70 58 aa2.6□□□□□ -1.99
CHD7-212ENST00000618450 MUC12Q9UKN1 5478 aa2.59□□□□□ -1.99
CHD7-212ENST00000618450 HMCN1Q96RW7 5635 aa2.58□□□□□ -2
CHD7-212ENST00000618450 KRTAP4-3Q9BYR4 195 aa2.57□□□□□ -2
CHD7-212ENST00000618450 MT1MQ8N339 61 aa2.52□□□□□ -2.01
CHD7-212ENST00000618450 MT1GP13640 62 aa2.48□□□□□ -2.01
CHD7-212ENST00000618450 KRTAP19-3Q7Z4W3 81 aa2.48□□□□□ -2.01
CHD7-212ENST00000618450 FSIP2Q5CZC0 6907 aa2.42□□□□□ -2.02
CHD7-212ENST00000618450 KRTAP12-4P60329 112 aa2.39□□□□□ -2.03
CHD7-212ENST00000618450 MT1AP04731 61 aa2.38□□□□□ -2.03
CHD7-212ENST00000618450 DSTQ03001 7570 aaKnown RBP2.38□□□□□ -2.03
CHD7-212ENST00000618450 KRTAP5-5Q701N2 237 aaPredicted RBP2.37□□□□□ -2.03
CHD7-212ENST00000618450 MDN1Q9NU22 5596 aa2.36□□□□□ -2.03
CHD7-212ENST00000618450 LCE1AQ5T7P2 110 aa2.36□□□□□ -2.03
CHD7-212ENST00000618450 KRTAP6-1Q3LI64 71 aa2.32□□□□□ -2.04
CHD7-212ENST00000618450 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.32□□□□□ -2.04
CHD7-212ENST00000618450 MACF1Q9UPN3 7388 aaKnown RBP2.31□□□□□ -2.04
CHD7-212ENST00000618450 KRTAP5-11Q6L8G4 156 aa2.26□□□□□ -2.05
CHD7-212ENST00000618450 KRTAP5-9P26371 169 aa2.24□□□□□ -2.05
CHD7-212ENST00000618450 CRCT1Q9UGL9 99 aa2.23□□□□□ -2.05
CHD7-212ENST00000618450 SPRR2FQ96RM1 72 aa2.21□□□□□ -2.06
CHD7-212ENST00000618450 SYNE2Q8WXH0 6885 aaKnown RBP2.18□□□□□ -2.06
CHD7-212ENST00000618450 LCE3DQ9BYE3 92 aa2.18□□□□□ -2.06
CHD7-212ENST00000618450 SYNE1Q8NF91 8797 aaKnown RBP2.17□□□□□ -2.06
CHD7-212ENST00000618450 LCE3EQ5T5B0 92 aa2.16□□□□□ -2.06
CHD7-212ENST00000618450 KRTAP2-2Q9BYT5 123 aa2.16□□□□□ -2.06
CHD7-212ENST00000618450 PRM1P04553 51 aa2.13□□□□□ -2.07
CHD7-212ENST00000618450 KRTAP6-2Q3LI66 62 aa2.09□□□□□ -2.08
CHD7-212ENST00000618450 LCE1EQ5T753 118 aa2.06□□□□□ -2.08
CHD7-212ENST00000618450 KRTAP6-3Q3LI67 103 aa2.04□□□□□ -2.08
CHD7-212ENST00000618450 KRTAP5-4Q6L8H1 288 aa2.01□□□□□ -2.09
CHD7-212ENST00000618450 SPRR2EP22531 72 aa1.96□□□□□ -2.09
CHD7-212ENST00000618450 SPRR2BP35325 72 aa1.96□□□□□ -2.09
CHD7-212ENST00000618450 SPRR2AP35326 72 aa1.96□□□□□ -2.09
CHD7-212ENST00000618450 MT3P25713 68 aa1.95□□□□□ -2.1
CHD7-212ENST00000618450 KRTAP5-1Q6L8H4 278 aa1.94□□□□□ -2.1
CHD7-212ENST00000618450 KRTAP5-2Q701N4 177 aa1.92□□□□□ -2.1
CHD7-212ENST00000618450 KRTAP4-4Q9BYR3 166 aa1.9□□□□□ -2.1
CHD7-212ENST00000618450 SPRR2DP22532 72 aa1.87□□□□□ -2.11
CHD7-212ENST00000618450 MUC5ACP98088 5654 aa1.83□□□□□ -2.12
CHD7-212ENST00000618450 OBSCNQ5VST9 7968 aa1.82□□□□□ -2.12
CHD7-212ENST00000618450 MUC5BQ9HC84 5762 aaPredicted RBP1.78□□□□□ -2.12
CHD7-212ENST00000618450 KRTAP20-2Q3LI61 65 aa1.78□□□□□ -2.12
CHD7-212ENST00000618450 LCE1FQ5T754 118 aa1.78□□□□□ -2.12
CHD7-212ENST00000618450 NEBP20929 6669 aa1.75□□□□□ -2.13
CHD7-212ENST00000618450 KRTAP20-1Q3LI63 56 aa1.74□□□□□ -2.13
CHD7-212ENST00000618450 KRTAP5-10Q6L8G5 202 aa1.72□□□□□ -2.13
CHD7-212ENST00000618450 GPR98Q8WXG9 6306 aa1.67□□□□□ -2.14
CHD7-212ENST00000618450 MT4P47944 62 aa1.64□□□□□ -2.15
CHD7-212ENST00000618450 LCE1CQ5T751 118 aa1.61□□□□□ -2.15
CHD7-212ENST00000618450 LCE1BQ5T7P3 118 aa1.61□□□□□ -2.15
CHD7-212ENST00000618450 KRTAP21-2Q3LI59 83 aa1.57□□□□□ -2.16
CHD7-212ENST00000618450 KRTAP5-7Q6L8G8 165 aa1.51□□□□□ -2.17
CHD7-212ENST00000618450 KRTAP21-1Q3LI58 79 aa1.48□□□□□ -2.17
CHD7-212ENST00000618450 KRTAP5-8O75690 187 aa1.45□□□□□ -2.18
CHD7-212ENST00000618450 AHNAKQ09666 5890 aaKnown RBP1.45□□□□□ -2.18
CHD7-212ENST00000618450 AHNAK2Q8IVF2 5795 aa1.31□□□□□ -2.2
CHD7-212ENST00000618450 MUC19Q7Z5P9 8384 aa1.3□□□□□ -2.2
CHD7-212ENST00000618450 PHGR1C9JFL3 82 aa1.19□□□□□ -2.22
CHD7-212ENST00000618450 MUC16Q8WXI7 14507 aa0.85□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 6.3 ms