RNA–Protein interactions for RNA: ENST00000617926.4

CLTCL1-210, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-210ENST00000617926 KRTAP5-9P26371 169 aa4.62□□□□□ -1.67
CLTCL1-210ENST00000617926 KRTAP4-8A0A0G2JLE6 195 aa4.59□□□□□ -1.67
CLTCL1-210ENST00000617926 KRTAP19-4Q3LI73 84 aa4.59□□□□□ -1.67
CLTCL1-210ENST00000617926 KRTAP4-8Q9BYQ9 185 aa4.59□□□□□ -1.67
CLTCL1-210ENST00000617926 KRTAP19-7Q3SYF9 63 aa4.58□□□□□ -1.68
CLTCL1-210ENST00000617926 KRTAP9-6A8MVA2 160 aa4.57□□□□□ -1.68
CLTCL1-210ENST00000617926 NEBP20929 6669 aa4.53□□□□□ -1.68
CLTCL1-210ENST00000617926 MDN1Q9NU22 5596 aa4.52□□□□□ -1.69
CLTCL1-210ENST00000617926 SPRR2FQ96RM1 72 aa4.51□□□□□ -1.69
CLTCL1-210ENST00000617926 KRTAP2-3P0C7H8 128 aa4.5□□□□□ -1.69
CLTCL1-210ENST00000617926 KRTAP2-4Q9BYR9 128 aa4.5□□□□□ -1.69
CLTCL1-210ENST00000617926 KRTAP2-1Q9BYU5 128 aa4.5□□□□□ -1.69
CLTCL1-210ENST00000617926 MT1LQ93083 61 aa4.46□□□□□ -1.7
CLTCL1-210ENST00000617926 MT1EP04732 61 aa4.45□□□□□ -1.7
CLTCL1-210ENST00000617926 KRTAP4-7Q9BYR0 210 aa4.42□□□□□ -1.7
CLTCL1-210ENST00000617926 SPRR2EP22531 72 aa4.41□□□□□ -1.7
CLTCL1-210ENST00000617926 SPRR2BP35325 72 aa4.41□□□□□ -1.7
CLTCL1-210ENST00000617926 SPRR2AP35326 72 aa4.41□□□□□ -1.7
CLTCL1-210ENST00000617926 LCE1AQ5T7P2 110 aa4.39□□□□□ -1.71
CLTCL1-210ENST00000617926 KRTAP20-1Q3LI63 56 aa4.34□□□□□ -1.71
CLTCL1-210ENST00000617926 SPRR2DP22532 72 aa4.25□□□□□ -1.73
CLTCL1-210ENST00000617926 LCE5AQ5TCM9 118 aa4.16□□□□□ -1.74
CLTCL1-210ENST00000617926 KRTAP19-3Q7Z4W3 81 aa4.16□□□□□ -1.74
CLTCL1-210ENST00000617926 MT1MQ8N339 61 aa4.15□□□□□ -1.75
CLTCL1-210ENST00000617926 LCE3BQ5TA77 95 aa4.13□□□□□ -1.75
CLTCL1-210ENST00000617926 LOC100996750A0A140TA64 210 aa4.13□□□□□ -1.75
CLTCL1-210ENST00000617926 MT1GP13640 62 aa4.13□□□□□ -1.75
CLTCL1-210ENST00000617926 KRTAP4-3Q9BYR4 195 aa4.13□□□□□ -1.75
CLTCL1-210ENST00000617926 KRTAP2-2Q9BYT5 123 aa4.13□□□□□ -1.75
CLTCL1-210ENST00000617926 DSTQ03001 7570 aaKnown RBP4.08□□□□□ -1.76
CLTCL1-210ENST00000617926 KRTAP12-4P60329 112 aa3.9□□□□□ -1.78
CLTCL1-210ENST00000617926 MT1AP04731 61 aa3.83□□□□□ -1.8
CLTCL1-210ENST00000617926 KRTAP4-9Q9BYQ8 210 aa3.83□□□□□ -1.8
CLTCL1-210ENST00000617926 KRTAP6-1Q3LI64 71 aa3.76□□□□□ -1.81
CLTCL1-210ENST00000617926 LCE1DQ5T752 114 aa3.76□□□□□ -1.81
CLTCL1-210ENST00000617926 LCE4AQ5TA78 99 aa3.75□□□□□ -1.81
CLTCL1-210ENST00000617926 KRTAP5-4Q6L8H1 288 aa3.75□□□□□ -1.81
CLTCL1-210ENST00000617926 MT4P47944 62 aa3.73□□□□□ -1.81
CLTCL1-210ENST00000617926 KRTAP5-5Q701N2 237 aaPredicted RBP3.7□□□□□ -1.82
CLTCL1-210ENST00000617926 HMCN1Q96RW7 5635 aa3.69□□□□□ -1.82
CLTCL1-210ENST00000617926 KRTAP4-6Q9BYQ5 205 aa3.66□□□□□ -1.82
CLTCL1-210ENST00000617926 LCE3DQ9BYE3 92 aa3.65□□□□□ -1.83
CLTCL1-210ENST00000617926 LCE3EQ5T5B0 92 aa3.62□□□□□ -1.83
CLTCL1-210ENST00000617926 SYNE1Q8NF91 8797 aaKnown RBP3.53□□□□□ -1.84
CLTCL1-210ENST00000617926 KRTAP20-2Q3LI61 65 aa3.53□□□□□ -1.84
CLTCL1-210ENST00000617926 KRTAP9-4Q9BYQ2 154 aa3.52□□□□□ -1.85
CLTCL1-210ENST00000617926 GPR98Q8WXG9 6306 aa3.51□□□□□ -1.85
CLTCL1-210ENST00000617926 PRM1P04553 51 aa3.48□□□□□ -1.85
CLTCL1-210ENST00000617926 AHNAK2Q8IVF2 5795 aa3.48□□□□□ -1.85
CLTCL1-210ENST00000617926 KRTAP5-3Q6L8H2 238 aa3.43□□□□□ -1.86
CLTCL1-210ENST00000617926 KRTAP5-10Q6L8G5 202 aa3.41□□□□□ -1.86
CLTCL1-210ENST00000617926 KRTAP6-2Q3LI66 62 aa3.38□□□□□ -1.87
CLTCL1-210ENST00000617926 MT3P25713 68 aa3.36□□□□□ -1.87
CLTCL1-210ENST00000617926 KRTAP5-2Q701N4 177 aa3.32□□□□□ -1.88
CLTCL1-210ENST00000617926 KRTAP5-7Q6L8G8 165 aa3.24□□□□□ -1.89
CLTCL1-210ENST00000617926 KRTAP4-11Q9BYQ6 195 aa3.17□□□□□ -1.9
CLTCL1-210ENST00000617926 OBSCNQ5VST9 7968 aa3.13□□□□□ -1.91
CLTCL1-210ENST00000617926 KRTAP5-8O75690 187 aa3.08□□□□□ -1.92
CLTCL1-210ENST00000617926 KRTAP5-1Q6L8H4 278 aa2.95□□□□□ -1.94
CLTCL1-210ENST00000617926 MUC5ACP98088 5654 aa2.86□□□□□ -1.95
CLTCL1-210ENST00000617926 KRTAP9-9Q9BYP9 154 aa2.85□□□□□ -1.95
CLTCL1-210ENST00000617926 MUC5BQ9HC84 5762 aaPredicted RBP2.84□□□□□ -1.95
CLTCL1-210ENST00000617926 LCE1EQ5T753 118 aa2.84□□□□□ -1.95
CLTCL1-210ENST00000617926 AHNAKQ09666 5890 aaKnown RBP2.76□□□□□ -1.97
CLTCL1-210ENST00000617926 KRTAP4-2Q9BYR5 136 aa2.72□□□□□ -1.97
CLTCL1-210ENST00000617926 LCE1BQ5T7P3 118 aa2.69□□□□□ -1.98
CLTCL1-210ENST00000617926 LCE1CQ5T751 118 aa2.65□□□□□ -1.99
CLTCL1-210ENST00000617926 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.5□□□□□ -2.01
CLTCL1-210ENST00000617926 KRTAP21-2Q3LI59 83 aa2.45□□□□□ -2.02
CLTCL1-210ENST00000617926 KRTAP4-12Q9BQ66 201 aa2.41□□□□□ -2.02
CLTCL1-210ENST00000617926 KRTAP5-11Q6L8G4 156 aa2.4□□□□□ -2.03
CLTCL1-210ENST00000617926 KRTAP21-1Q3LI58 79 aa2.25□□□□□ -2.05
CLTCL1-210ENST00000617926 LCE1FQ5T754 118 aa2.25□□□□□ -2.05
CLTCL1-210ENST00000617926 KRTAP4-4Q9BYR3 166 aa2.13□□□□□ -2.07
CLTCL1-210ENST00000617926 PHGR1C9JFL3 82 aa2.06□□□□□ -2.08
CLTCL1-210ENST00000617926 MUC19Q7Z5P9 8384 aa1.89□□□□□ -2.11
CLTCL1-210ENST00000617926 MUC16Q8WXI7 14507 aa1.36□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 11.1 ms