RNA–Protein interactions for RNA: ENST00000617585.1

ARHGEF1-223, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-223ENST00000617585 LCE1DQ5T752 114 aa7.77□□□□□ -1.17
ARHGEF1-223ENST00000617585 TMEM258P61165 79 aa7.75□□□□□ -1.17
ARHGEF1-223ENST00000617585 UQCR11O14957 56 aa7.72□□□□□ -1.17
ARHGEF1-223ENST00000617585 KRTAP4-3Q9BYR4 195 aa7.71□□□□□ -1.18
ARHGEF1-223ENST00000617585 KRTAP5-4Q6L8H1 288 aa7.67□□□□□ -1.18
ARHGEF1-223ENST00000617585 HMCN1Q96RW7 5635 aa7.66□□□□□ -1.18
ARHGEF1-223ENST00000617585 KRTAP12-3P60328 96 aa7.64□□□□□ -1.19
ARHGEF1-223ENST00000617585 MT4P47944 62 aa7.62□□□□□ -1.19
ARHGEF1-223ENST00000617585 KRTAP4-7Q9BYR0 210 aa7.52□□□□□ -1.21
ARHGEF1-223ENST00000617585 MIR22HGQ0VDD5 57 aa7.51□□□□□ -1.21
ARHGEF1-223ENST00000617585 KRTAP25-1Q3LHN0 102 aa7.5□□□□□ -1.21
ARHGEF1-223ENST00000617585 KRTAP4-6Q9BYQ5 205 aa7.45□□□□□ -1.22
ARHGEF1-223ENST00000617585 AHNAK2Q8IVF2 5795 aa7.4□□□□□ -1.23
ARHGEF1-223ENST00000617585 K7ERS5 55 aa7.37□□□□□ -1.23
ARHGEF1-223ENST00000617585 V9GYY9 64 aa7.37□□□□□ -1.23
ARHGEF1-223ENST00000617585 KRTAP5-5Q701N2 237 aaPredicted RBP7.34□□□□□ -1.23
ARHGEF1-223ENST00000617585 Q1T7F1 81 aa7.33□□□□□ -1.24
ARHGEF1-223ENST00000617585 KRTAP19-4Q3LI73 84 aa7.33□□□□□ -1.24
ARHGEF1-223ENST00000617585 KRTAP23-1A1A580 65 aa7.29□□□□□ -1.24
ARHGEF1-223ENST00000617585 PSPHP1O15172 72 aa7.28□□□□□ -1.24
ARHGEF1-223ENST00000617585 KRTAP5-10Q6L8G5 202 aa7.28□□□□□ -1.24
ARHGEF1-223ENST00000617585 KRTAP20-2Q3LI61 65 aa7.2□□□□□ -1.26
ARHGEF1-223ENST00000617585 SPRR5A0A1B0GTR4 108 aa7.19□□□□□ -1.26
ARHGEF1-223ENST00000617585 PCP4P48539 62 aa7.17□□□□□ -1.26
ARHGEF1-223ENST00000617585 LOC100996750A0A140TA64 210 aa7.13□□□□□ -1.27
ARHGEF1-223ENST00000617585 KRTAP15-1Q3LI76 137 aa7.13□□□□□ -1.27
ARHGEF1-223ENST00000617585 KRTAP12-4P60329 112 aa7.11□□□□□ -1.27
ARHGEF1-223ENST00000617585 KRTAP5-3Q6L8H2 238 aa7.09□□□□□ -1.27
ARHGEF1-223ENST00000617585 SYNE1Q8NF91 8797 aaKnown RBP7.04□□□□□ -1.28
ARHGEF1-223ENST00000617585 LCE3CQ5T5A8 94 aa7.04□□□□□ -1.28
ARHGEF1-223ENST00000617585 A6NED7 52 aa7.03□□□□□ -1.28
ARHGEF1-223ENST00000617585 KRTAP5-7Q6L8G8 165 aa7.02□□□□□ -1.29
ARHGEF1-223ENST00000617585 CDC42SE1Q9NRR8 79 aa6.97□□□□□ -1.29
ARHGEF1-223ENST00000617585 RPS28P62857 69 aaKnown RBP6.88□□□□□ -1.31
ARHGEF1-223ENST00000617585 ROMO1P60602 79 aa6.87□□□□□ -1.31
ARHGEF1-223ENST00000617585 MT1AP04731 61 aa6.78□□□□□ -1.32
ARHGEF1-223ENST00000617585 KRTAP6-1Q3LI64 71 aa6.73□□□□□ -1.33
ARHGEF1-223ENST00000617585 KRTAP5-2Q701N4 177 aa6.72□□□□□ -1.33
ARHGEF1-223ENST00000617585 KRTAP9-6A8MVA2 160 aa6.66□□□□□ -1.34
ARHGEF1-223ENST00000617585 KRTAP4-11Q9BYQ6 195 aa6.59□□□□□ -1.35
ARHGEF1-223ENST00000617585 KRTAP9-4Q9BYQ2 154 aa6.57□□□□□ -1.36
ARHGEF1-223ENST00000617585 KRTAP6-2Q3LI66 62 aa6.42□□□□□ -1.38
ARHGEF1-223ENST00000617585 KRTAP5-8O75690 187 aa6.38□□□□□ -1.39
ARHGEF1-223ENST00000617585 OBSCNQ5VST9 7968 aa6.31□□□□□ -1.4
ARHGEF1-223ENST00000617585 MT3P25713 68 aa6.2□□□□□ -1.42
ARHGEF1-223ENST00000617585 MUC5BQ9HC84 5762 aaPredicted RBP6.11□□□□□ -1.43
ARHGEF1-223ENST00000617585 MUC5ACP98088 5654 aa6.07□□□□□ -1.44
ARHGEF1-223ENST00000617585 AHNAKQ09666 5890 aaKnown RBP6.06□□□□□ -1.44
ARHGEF1-223ENST00000617585 KRTAP5-1Q6L8H4 278 aa6.02□□□□□ -1.45
ARHGEF1-223ENST00000617585 BRK1Q8WUW1 75 aa6.02□□□□□ -1.45
ARHGEF1-223ENST00000617585 KRTAP9-9Q9BYP9 154 aa6.02□□□□□ -1.45
ARHGEF1-223ENST00000617585 LCE1EQ5T753 118 aa5.76□□□□□ -1.49
ARHGEF1-223ENST00000617585 PRO0628Q9UI54 55 aa5.75□□□□□ -1.49
ARHGEF1-223ENST00000617585 PMAIP1Q13794 54 aa5.69□□□□□ -1.5
ARHGEF1-223ENST00000617585 KRTAP4-2Q9BYR5 136 aa5.42□□□□□ -1.54
ARHGEF1-223ENST00000617585 KTN1-AS1Q86SY8 53 aa5.38□□□□□ -1.55
ARHGEF1-223ENST00000617585 PRAC1Q96KF2 57 aa5.36□□□□□ -1.55
ARHGEF1-223ENST00000617585 LCE1CQ5T751 118 aa5.34□□□□□ -1.55
ARHGEF1-223ENST00000617585 LCE1BQ5T7P3 118 aa5.34□□□□□ -1.55
ARHGEF1-223ENST00000617585 SVIPQ8NHG7 77 aa5.08□□□□□ -1.6
ARHGEF1-223ENST00000617585 LCE3DQ9BYE3 92 aa5.06□□□□□ -1.6
ARHGEF1-223ENST00000617585 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.89□□□□□ -1.63
ARHGEF1-223ENST00000617585 KRTAP4-12Q9BQ66 201 aa4.85□□□□□ -1.63
ARHGEF1-223ENST00000617585 KRTAP5-11Q6L8G4 156 aa4.84□□□□□ -1.63
ARHGEF1-223ENST00000617585 LCE3EQ5T5B0 92 aa4.75□□□□□ -1.65
ARHGEF1-223ENST00000617585 LCE1FQ5T754 118 aa4.75□□□□□ -1.65
ARHGEF1-223ENST00000617585 LUZP6Q538Z0 58 aa4.56□□□□□ -1.68
ARHGEF1-223ENST00000617585 KRTAP21-2Q3LI59 83 aa4.46□□□□□ -1.7
ARHGEF1-223ENST00000617585 PHGR1C9JFL3 82 aa4.19□□□□□ -1.74
ARHGEF1-223ENST00000617585 NDUFAF8A1L188 74 aa4.05□□□□□ -1.76
ARHGEF1-223ENST00000617585 KRTAP4-4Q9BYR3 166 aa4.01□□□□□ -1.77
ARHGEF1-223ENST00000617585 MUC19Q7Z5P9 8384 aa3.88□□□□□ -1.79
ARHGEF1-223ENST00000617585 A0A0A0MQY5 61 aa3.55□□□□□ -1.84
ARHGEF1-223ENST00000617585 H3BS24 57 aa3.55□□□□□ -1.84
ARHGEF1-223ENST00000617585 PRM1P04553 51 aa3.49□□□□□ -1.85
ARHGEF1-223ENST00000617585 INE1O15225 51 aa3.43□□□□□ -1.86
ARHGEF1-223ENST00000617585 KRTAP21-1Q3LI58 79 aa3.21□□□□□ -1.9
ARHGEF1-223ENST00000617585 MUC16Q8WXI7 14507 aa2.74□□□□□ -1.97
Retrieved 78 of 20,778 RNA–protein pairs in 7.3 ms