RNA–Protein interactions for RNA: ENST00000617555.4

NOP2-222, Transcript of NOP2 nucleolar protein, human

TSL 5 BASIC

Gene NOP2, Length 2,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NOP2-222	ENST00000617555	MT1L	Q93083	61 aa		5.35	□□□□□ -1.55
NOP2-222	ENST00000617555	SYNE2	Q8WXH0	6885 aa	Known RBP	5.35	□□□□□ -1.55
NOP2-222	ENST00000617555	MUC12	Q9UKN1	5478 aa		5.35	□□□□□ -1.55
NOP2-222	ENST00000617555	KRTAP6-3	Q3LI67	103 aa		5.3	□□□□□ -1.56
NOP2-222	ENST00000617555	KRTAP4-7	Q9BYR0	210 aa		5.26	□□□□□ -1.57
NOP2-222	ENST00000617555	KRTAP19-4	Q3LI73	84 aa		5.23	□□□□□ -1.57
NOP2-222	ENST00000617555	SPRR2F	Q96RM1	72 aa		5.23	□□□□□ -1.57
NOP2-222	ENST00000617555	KRTAP19-3	Q7Z4W3	81 aa		5.18	□□□□□ -1.58
NOP2-222	ENST00000617555	KRTAP5-9	P26371	169 aa		5.16	□□□□□ -1.58
NOP2-222	ENST00000617555	KRTAP9-6	A8MVA2	160 aa		5.14	□□□□□ -1.59
NOP2-222	ENST00000617555	MT1G	P13640	62 aa		5.13	□□□□□ -1.59
NOP2-222	ENST00000617555	MT1M	Q8N339	61 aa		5.11	□□□□□ -1.59
NOP2-222	ENST00000617555	MDN1	Q9NU22	5596 aa		5.09	□□□□□ -1.59
NOP2-222	ENST00000617555	LCE5A	Q5TCM9	118 aa		5.09	□□□□□ -1.6
NOP2-222	ENST00000617555	KRTAP4-3	Q9BYR4	195 aa		5.08	□□□□□ -1.6
NOP2-222	ENST00000617555	LCE1A	Q5T7P2	110 aa		4.99	□□□□□ -1.61
NOP2-222	ENST00000617555	NEB	P20929	6669 aa		4.98	□□□□□ -1.61
NOP2-222	ENST00000617555	SPRR2E	P22531	72 aa		4.94	□□□□□ -1.62
NOP2-222	ENST00000617555	SPRR2B	P35325	72 aa		4.94	□□□□□ -1.62
NOP2-222	ENST00000617555	SPRR2A	P35326	72 aa		4.94	□□□□□ -1.62
NOP2-222	ENST00000617555	LOC100996750	A0A140TA64	210 aa		4.94	□□□□□ -1.62
NOP2-222	ENST00000617555	DST	Q03001	7570 aa	Known RBP	4.92	□□□□□ -1.62
NOP2-222	ENST00000617555	KRTAP20-1	Q3LI63	56 aa		4.79	□□□□□ -1.64
NOP2-222	ENST00000617555	SPRR2D	P22532	72 aa		4.77	□□□□□ -1.65
NOP2-222	ENST00000617555	KRTAP2-3	P0C7H8	128 aa		4.76	□□□□□ -1.65
NOP2-222	ENST00000617555	KRTAP2-4	Q9BYR9	128 aa		4.76	□□□□□ -1.65
NOP2-222	ENST00000617555	KRTAP2-1	Q9BYU5	128 aa		4.76	□□□□□ -1.65
NOP2-222	ENST00000617555	LCE3B	Q5TA77	95 aa		4.62	□□□□□ -1.67
NOP2-222	ENST00000617555	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.61	□□□□□ -1.67
NOP2-222	ENST00000617555	KRTAP2-2	Q9BYT5	123 aa		4.6	□□□□□ -1.67
NOP2-222	ENST00000617555	INE1	O15225	51 aa		4.55	□□□□□ -1.68
NOP2-222	ENST00000617555	KRTAP6-1	Q3LI64	71 aa		4.53	□□□□□ -1.68
NOP2-222	ENST00000617555	MT1A	P04731	61 aa		4.52	□□□□□ -1.69
NOP2-222	ENST00000617555	SYNE1	Q8NF91	8797 aa	Known RBP	4.4	□□□□□ -1.71
NOP2-222	ENST00000617555	KRTAP5-4	Q6L8H1	288 aa		4.31	□□□□□ -1.72
NOP2-222	ENST00000617555	KRTAP9-4	Q9BYQ2	154 aa		4.29	□□□□□ -1.72
NOP2-222	ENST00000617555	KRTAP4-9	Q9BYQ8	210 aa		4.25	□□□□□ -1.73
NOP2-222	ENST00000617555	LCE4A	Q5TA78	99 aa		4.24	□□□□□ -1.73
NOP2-222	ENST00000617555	KRTAP12-4	P60329	112 aa		4.18	□□□□□ -1.74
NOP2-222	ENST00000617555	LCE1D	Q5T752	114 aa		4.16	□□□□□ -1.74
NOP2-222	ENST00000617555	MT4	P47944	62 aa		4.14	□□□□□ -1.75
NOP2-222	ENST00000617555	KRTAP6-2	Q3LI66	62 aa		4.14	□□□□□ -1.75
NOP2-222	ENST00000617555	KRTAP4-6	Q9BYQ5	205 aa		4.13	□□□□□ -1.75
NOP2-222	ENST00000617555	HMCN1	Q96RW7	5635 aa		4.08	□□□□□ -1.76
NOP2-222	ENST00000617555	MT3	P25713	68 aa		4.07	□□□□□ -1.76
NOP2-222	ENST00000617555	KRTAP20-2	Q3LI61	65 aa		4.03	□□□□□ -1.76
NOP2-222	ENST00000617555	LCE3D	Q9BYE3	92 aa		4.03	□□□□□ -1.76
NOP2-222	ENST00000617555	KRTAP5-2	Q701N4	177 aa		3.94	□□□□□ -1.78
NOP2-222	ENST00000617555	LCE3E	Q5T5B0	92 aa		3.93	□□□□□ -1.78
NOP2-222	ENST00000617555	KRTAP5-3	Q6L8H2	238 aa		3.88	□□□□□ -1.79
NOP2-222	ENST00000617555	OBSCN	Q5VST9	7968 aa		3.87	□□□□□ -1.79
NOP2-222	ENST00000617555	AHNAK2	Q8IVF2	5795 aa		3.8	□□□□□ -1.8
NOP2-222	ENST00000617555	GPR98	Q8WXG9	6306 aa		3.78	□□□□□ -1.8
NOP2-222	ENST00000617555	KRTAP5-10	Q6L8G5	202 aa		3.72	□□□□□ -1.81
NOP2-222	ENST00000617555	KRTAP5-7	Q6L8G8	165 aa		3.54	□□□□□ -1.84
NOP2-222	ENST00000617555	KRTAP4-11	Q9BYQ6	195 aa		3.54	□□□□□ -1.84
NOP2-222	ENST00000617555	PRM1	P04553	51 aa		3.53	□□□□□ -1.84
NOP2-222	ENST00000617555	LCE1E	Q5T753	118 aa		3.49	□□□□□ -1.85
NOP2-222	ENST00000617555	LCE1F	Q5T754	118 aa		3.42	□□□□□ -1.86
NOP2-222	ENST00000617555	KRTAP5-8	O75690	187 aa		3.41	□□□□□ -1.86
NOP2-222	ENST00000617555	MUC5AC	P98088	5654 aa		3.4	□□□□□ -1.86
NOP2-222	ENST00000617555	KRTAP5-1	Q6L8H4	278 aa		3.4	□□□□□ -1.87
NOP2-222	ENST00000617555	LCE1B	Q5T7P3	118 aa		3.32	□□□□□ -1.88
NOP2-222	ENST00000617555	KRTAP4-2	Q9BYR5	136 aa		3.31	□□□□□ -1.88
NOP2-222	ENST00000617555	LCE1C	Q5T751	118 aa		3.28	□□□□□ -1.88
NOP2-222	ENST00000617555	KRTAP9-9	Q9BYP9	154 aa		3.24	□□□□□ -1.89
NOP2-222	ENST00000617555	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.09	□□□□□ -1.91
NOP2-222	ENST00000617555	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.08	□□□□□ -1.92
NOP2-222	ENST00000617555	AHNAK	Q09666	5890 aa	Known RBP	3.01	□□□□□ -1.93
NOP2-222	ENST00000617555	KRTAP21-2	Q3LI59	83 aa		2.97	□□□□□ -1.93
NOP2-222	ENST00000617555	KRTAP4-12	Q9BQ66	201 aa		2.91	□□□□□ -1.94
NOP2-222	ENST00000617555	KRTAP5-11	Q6L8G4	156 aa		2.88	□□□□□ -1.95
NOP2-222	ENST00000617555	KRTAP4-4	Q9BYR3	166 aa		2.66	□□□□□ -1.98
NOP2-222	ENST00000617555	PHGR1	C9JFL3	82 aa		2.48	□□□□□ -2.01
NOP2-222	ENST00000617555	MUC19	Q7Z5P9	8384 aa		2.28	□□□□□ -2.04
NOP2-222	ENST00000617555	KRTAP21-1	Q3LI58	79 aa		2.17	□□□□□ -2.06
NOP2-222	ENST00000617555	MUC16	Q8WXI7	14507 aa		1.6	□□□□□ -2.15

Retrieved 77 of 20,778 RNA–protein pairs in 11.3 ms