RNA–Protein interactions for RNA: ENST00000617422.4

CNTNAP3B-212, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-212ENST00000617422 LCE3CQ5T5A8 94 aa7.27□□□□□ -1.25
CNTNAP3B-212ENST00000617422 KRTAP4-7Q9BYR0 210 aa7.23□□□□□ -1.25
CNTNAP3B-212ENST00000617422 SPRR2FQ96RM1 72 aa7.2□□□□□ -1.26
CNTNAP3B-212ENST00000617422 KRTAP9-6A0A140TA67 174 aa7.12□□□□□ -1.27
CNTNAP3B-212ENST00000617422 KRTAP19-3Q7Z4W3 81 aa7.09□□□□□ -1.27
CNTNAP3B-212ENST00000617422 KRTAP5-9P26371 169 aa7.06□□□□□ -1.28
CNTNAP3B-212ENST00000617422 MDN1Q9NU22 5596 aa7.04□□□□□ -1.28
CNTNAP3B-212ENST00000617422 KRTAP19-4Q3LI73 84 aa7.04□□□□□ -1.28
CNTNAP3B-212ENST00000617422 KRTAP9-6A8MVA2 160 aa7.02□□□□□ -1.29
CNTNAP3B-212ENST00000617422 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.01□□□□□ -1.29
CNTNAP3B-212ENST00000617422 MT1GP13640 62 aa7.01□□□□□ -1.29
CNTNAP3B-212ENST00000617422 MT1MQ8N339 61 aa7□□□□□ -1.29
CNTNAP3B-212ENST00000617422 KRTAP4-3Q9BYR4 195 aa7□□□□□ -1.29
CNTNAP3B-212ENST00000617422 LCE5AQ5TCM9 118 aa6.98□□□□□ -1.29
CNTNAP3B-212ENST00000617422 LCE1AQ5T7P2 110 aa6.89□□□□□ -1.31
CNTNAP3B-212ENST00000617422 DSTQ03001 7570 aaKnown RBP6.83□□□□□ -1.32
CNTNAP3B-212ENST00000617422 KRTAP6-3Q3LI67 103 aa6.83□□□□□ -1.32
CNTNAP3B-212ENST00000617422 KRTAP2-3P0C7H8 128 aa6.78□□□□□ -1.32
CNTNAP3B-212ENST00000617422 KRTAP2-4Q9BYR9 128 aa6.78□□□□□ -1.32
CNTNAP3B-212ENST00000617422 KRTAP2-1Q9BYU5 128 aa6.78□□□□□ -1.32
CNTNAP3B-212ENST00000617422 LOC100996750A0A140TA64 210 aa6.78□□□□□ -1.32
CNTNAP3B-212ENST00000617422 SPRR2EP22531 72 aa6.77□□□□□ -1.33
CNTNAP3B-212ENST00000617422 SPRR2BP35325 72 aa6.77□□□□□ -1.33
CNTNAP3B-212ENST00000617422 SPRR2AP35326 72 aa6.77□□□□□ -1.33
CNTNAP3B-212ENST00000617422 KRTAP9-7A8MTY7 169 aa6.55□□□□□ -1.36
CNTNAP3B-212ENST00000617422 SPRR2DP22532 72 aa6.51□□□□□ -1.37
CNTNAP3B-212ENST00000617422 NEBP20929 6669 aa6.49□□□□□ -1.37
CNTNAP3B-212ENST00000617422 KRTAP5-5Q701N2 237 aaPredicted RBP6.31□□□□□ -1.4
CNTNAP3B-212ENST00000617422 LCE3BQ5TA77 95 aa6.24□□□□□ -1.41
CNTNAP3B-212ENST00000617422 KRTAP6-1Q3LI64 71 aa6.2□□□□□ -1.42
CNTNAP3B-212ENST00000617422 MT1AP04731 61 aa6.17□□□□□ -1.42
CNTNAP3B-212ENST00000617422 SYNE1Q8NF91 8797 aaKnown RBP6.08□□□□□ -1.44
CNTNAP3B-212ENST00000617422 KRTAP12-4P60329 112 aa5.98□□□□□ -1.45
CNTNAP3B-212ENST00000617422 KRTAP5-4Q6L8H1 288 aa5.93□□□□□ -1.46
CNTNAP3B-212ENST00000617422 KRTAP9-4Q9BYQ2 154 aa5.86□□□□□ -1.47
CNTNAP3B-212ENST00000617422 KRTAP4-9Q9BYQ8 210 aa5.82□□□□□ -1.48
CNTNAP3B-212ENST00000617422 KRTAP2-2Q9BYT5 123 aa5.81□□□□□ -1.48
CNTNAP3B-212ENST00000617422 KRTAP20-1Q3LI63 56 aa5.78□□□□□ -1.48
CNTNAP3B-212ENST00000617422 KRTAP4-6Q9BYQ5 205 aa5.73□□□□□ -1.49
CNTNAP3B-212ENST00000617422 MT4P47944 62 aa5.71□□□□□ -1.5
CNTNAP3B-212ENST00000617422 LCE4AQ5TA78 99 aa5.7□□□□□ -1.5
CNTNAP3B-212ENST00000617422 KRTAP6-2Q3LI66 62 aa5.68□□□□□ -1.5
CNTNAP3B-212ENST00000617422 HMCN1Q96RW7 5635 aa5.62□□□□□ -1.51
CNTNAP3B-212ENST00000617422 LCE3DQ9BYE3 92 aa5.59□□□□□ -1.52
CNTNAP3B-212ENST00000617422 LCE1DQ5T752 114 aa5.58□□□□□ -1.52
CNTNAP3B-212ENST00000617422 KRTAP20-2Q3LI61 65 aa5.56□□□□□ -1.52
CNTNAP3B-212ENST00000617422 MT3P25713 68 aa5.55□□□□□ -1.52
CNTNAP3B-212ENST00000617422 LCE3EQ5T5B0 92 aa5.54□□□□□ -1.52
CNTNAP3B-212ENST00000617422 OBSCNQ5VST9 7968 aa5.43□□□□□ -1.54
CNTNAP3B-212ENST00000617422 KRTAP5-2Q701N4 177 aa5.41□□□□□ -1.54
CNTNAP3B-212ENST00000617422 KRTAP5-3Q6L8H2 238 aa5.36□□□□□ -1.55
CNTNAP3B-212ENST00000617422 PRM1P04553 51 aa5.29□□□□□ -1.56
CNTNAP3B-212ENST00000617422 AHNAK2Q8IVF2 5795 aa4.88□□□□□ -1.63
CNTNAP3B-212ENST00000617422 KRTAP4-11Q9BYQ6 195 aa4.78□□□□□ -1.64
CNTNAP3B-212ENST00000617422 LCE1EQ5T753 118 aa4.77□□□□□ -1.65
CNTNAP3B-212ENST00000617422 KRTAP4-12Q9BQ66 201 aa4.74□□□□□ -1.65
CNTNAP3B-212ENST00000617422 KRTAP5-1Q6L8H4 278 aa4.7□□□□□ -1.66
CNTNAP3B-212ENST00000617422 MUC5ACP98088 5654 aa4.65□□□□□ -1.67
CNTNAP3B-212ENST00000617422 KRTAP5-8O75690 187 aa4.62□□□□□ -1.67
CNTNAP3B-212ENST00000617422 KRTAP9-9Q9BYP9 154 aa4.58□□□□□ -1.68
CNTNAP3B-212ENST00000617422 LCE1BQ5T7P3 118 aa4.57□□□□□ -1.68
CNTNAP3B-212ENST00000617422 KRTAP5-10Q6L8G5 202 aa4.57□□□□□ -1.68
CNTNAP3B-212ENST00000617422 KRTAP4-2Q9BYR5 136 aa4.55□□□□□ -1.68
CNTNAP3B-212ENST00000617422 LCE1CQ5T751 118 aa4.48□□□□□ -1.69
CNTNAP3B-212ENST00000617422 KRTAP5-7Q6L8G8 165 aa4.44□□□□□ -1.7
CNTNAP3B-212ENST00000617422 GPR98Q8WXG9 6306 aa4.31□□□□□ -1.72
CNTNAP3B-212ENST00000617422 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.2□□□□□ -1.74
CNTNAP3B-212ENST00000617422 MUC5BQ9HC84 5762 aaPredicted RBP4.09□□□□□ -1.76
CNTNAP3B-212ENST00000617422 KRTAP21-2Q3LI59 83 aa4.06□□□□□ -1.76
CNTNAP3B-212ENST00000617422 KRTAP5-11Q6L8G4 156 aa3.93□□□□□ -1.78
CNTNAP3B-212ENST00000617422 KRTAP4-4Q9BYR3 166 aa3.67□□□□□ -1.82
CNTNAP3B-212ENST00000617422 AHNAKQ09666 5890 aaKnown RBP3.59□□□□□ -1.84
CNTNAP3B-212ENST00000617422 LCE1FQ5T754 118 aa3.44□□□□□ -1.86
CNTNAP3B-212ENST00000617422 PHGR1C9JFL3 82 aa3.41□□□□□ -1.86
CNTNAP3B-212ENST00000617422 KRTAP21-1Q3LI58 79 aa3.38□□□□□ -1.87
CNTNAP3B-212ENST00000617422 MUC19Q7Z5P9 8384 aa3.22□□□□□ -1.89
CNTNAP3B-212ENST00000617422 MUC16Q8WXI7 14507 aa2.19□□□□□ -2.06
Retrieved 77 of 20,778 RNA–protein pairs in 222.1 ms